RNA–Protein interactions for RNA: ENST00000510626.5

HTT-208, Transcript of huntingtin, humanhuman

TSL 1 (best)

Gene HTT, Length 14,438 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-208ENST00000510626 RPP14O95059 124 aaKnown RBP7.97□□□□□ -1.13
HTT-208ENST00000510626 SCAND1P57086 179 aa7.97□□□□□ -1.13
HTT-208ENST00000510626 FAM110CQ1W6H9 321 aa7.97□□□□□ -1.13
HTT-208ENST00000510626 PCGF3Q3KNV8 242 aa7.97□□□□□ -1.13
HTT-208ENST00000510626 DBF4BQ8NFT6 615 aa7.97□□□□□ -1.13
HTT-208ENST00000510626 C22orf15Q8WYQ4 148 aa7.97□□□□□ -1.13
HTT-208ENST00000510626 TDP1Q9NUW8 608 aa7.97□□□□□ -1.13
HTT-208ENST00000510626 SLC22A14Q9Y267 594 aa7.97□□□□□ -1.13
HTT-208ENST00000510626 SYPP08247 313 aa7.97□□□□□ -1.13
HTT-208ENST00000510626 STSP08842 583 aa7.97□□□□□ -1.13
HTT-208ENST00000510626 CASP3P42574 277 aa7.97□□□□□ -1.13
HTT-208ENST00000510626 GCGRP47871 477 aa7.97□□□□□ -1.13
HTT-208ENST00000510626 IDH3GP51553 393 aaPredicted RBP7.97□□□□□ -1.13
HTT-208ENST00000510626 SLC10A6Q3KNW5 377 aa7.97□□□□□ -1.13
HTT-208ENST00000510626 PLK5Q496M5 336 aa7.97□□□□□ -1.13
HTT-208ENST00000510626 RDH10Q8IZV5 341 aa7.97□□□□□ -1.13
HTT-208ENST00000510626 ZNF566Q969W8 418 aa7.97□□□□□ -1.13
HTT-208ENST00000510626 NSUN3Q9H649 340 aaKnown RBP7.97□□□□□ -1.13
HTT-208ENST00000510626 SLC16A6O15403 523 aa7.97□□□□□ -1.13
HTT-208ENST00000510626 T-ENOLP0DO92 83 aa7.97□□□□□ -1.13
HTT-208ENST00000510626 CPT2P23786 658 aa7.97□□□□□ -1.13
HTT-208ENST00000510626 KCT2Q8NC54 265 aa7.97□□□□□ -1.13
HTT-208ENST00000510626 DPEP3Q9H4B8 488 aa7.97□□□□□ -1.13
HTT-208ENST00000510626 A0A1W2PPL8 197 aa7.96□□□□□ -1.13
HTT-208ENST00000510626 TPST2O60704 377 aa7.96□□□□□ -1.13
HTT-208ENST00000510626 PRKACGP22612 351 aa7.96□□□□□ -1.13
HTT-208ENST00000510626 GABRB3P28472 473 aa7.96□□□□□ -1.13
HTT-208ENST00000510626 KIAA0907Q7Z7F0 614 aaPredicted RBP7.96□□□□□ -1.13
HTT-208ENST00000510626 TMEM185AQ8NFB2 350 aa7.96□□□□□ -1.13
HTT-208ENST00000510626 RRNAD1Q96FB5 475 aaKnown RBP7.96□□□□□ -1.13
HTT-208ENST00000510626 FAM83CQ9BQN1 747 aa7.96□□□□□ -1.13
HTT-208ENST00000510626 PATZ1Q9HBE1 687 aaKnown RBP7.96□□□□□ -1.13
HTT-208ENST00000510626 EPHA6Q9UF33 1036 aa7.96□□□□□ -1.13
HTT-208ENST00000510626 TGFB1P01137 390 aa7.96□□□□□ -1.13
HTT-208ENST00000510626 PDZD3Q86UT5 571 aa7.96□□□□□ -1.13
HTT-208ENST00000510626 PIM3Q86V86 326 aa7.96□□□□□ -1.13
HTT-208ENST00000510626 ADGRG5Q8IZF4 528 aa7.96□□□□□ -1.13
HTT-208ENST00000510626 TRAM1L1Q8N609 369 aa7.96□□□□□ -1.13
HTT-208ENST00000510626 OR5H6Q8NGV6 325 aa7.96□□□□□ -1.13
HTT-208ENST00000510626 ZFP90Q8TF47 636 aa7.96□□□□□ -1.13
HTT-208ENST00000510626 NRG4Q8WWG1 115 aa7.96□□□□□ -1.13
HTT-208ENST00000510626 SLC6A7Q99884 636 aa7.96□□□□□ -1.13
HTT-208ENST00000510626 SEMA4GQ9NTN9 838 aa7.96□□□□□ -1.13
HTT-208ENST00000510626 PIGVQ9NUD9 493 aa7.96□□□□□ -1.13
HTT-208ENST00000510626 SLC22A23A1A5C7 686 aa7.96□□□□□ -1.13
HTT-208ENST00000510626 A8MV72 311 aaPredicted RBP7.96□□□□□ -1.13
HTT-208ENST00000510626 NFKBIEO00221 500 aa7.96□□□□□ -1.13
HTT-208ENST00000510626 ERVK-25P63136 954 aa7.96□□□□□ -1.13
HTT-208ENST00000510626 IL13RA1P78552 427 aa7.96□□□□□ -1.13
HTT-208ENST00000510626 FBXL22Q6P050 247 aa7.96□□□□□ -1.13
HTT-208ENST00000510626 ENPP6Q6UWR7 440 aa7.96□□□□□ -1.13
HTT-208ENST00000510626 ARHGAP39Q9C0H5 1083 aa7.96□□□□□ -1.13
HTT-208ENST00000510626 PBX2P40425 430 aa7.96□□□□□ -1.13
HTT-208ENST00000510626 GPR139Q6DWJ6 353 aa7.96□□□□□ -1.13
HTT-208ENST00000510626 OCSTAMPQ9BR26 566 aa7.96□□□□□ -1.13
HTT-208ENST00000510626 GATCO43716 136 aaKnown RBP7.96□□□□□ -1.13
HTT-208ENST00000510626 SOX14O95416 240 aa7.96□□□□□ -1.13
HTT-208ENST00000510626 MC1RQ01726 317 aa7.96□□□□□ -1.13
HTT-208ENST00000510626 BDH1Q02338 343 aa7.96□□□□□ -1.13
HTT-208ENST00000510626 ZNF280BQ86YH2 543 aa7.96□□□□□ -1.13
HTT-208ENST00000510626 UMODL1-AS1Q8N2C9 162 aa7.96□□□□□ -1.13
HTT-208ENST00000510626 DCBLD1Q8N8Z6 715 aa7.96□□□□□ -1.13
HTT-208ENST00000510626 PELI2Q9HAT8 420 aa7.96□□□□□ -1.13
HTT-208ENST00000510626 EDDM13A0A1B0GTR0 161 aa7.96□□□□□ -1.14
HTT-208ENST00000510626 APBB3O95704 486 aa7.96□□□□□ -1.14
HTT-208ENST00000510626 AMY2AP04746 511 aa7.96□□□□□ -1.14
HTT-208ENST00000510626 PTH2RP49190 550 aa7.96□□□□□ -1.14
HTT-208ENST00000510626 HBG1P69891 147 aa7.96□□□□□ -1.14
HTT-208ENST00000510626 HBG2P69892 147 aa7.96□□□□□ -1.14
HTT-208ENST00000510626 MPEG1Q2M385 716 aa7.96□□□□□ -1.14
HTT-208ENST00000510626 TRMT10AQ8TBZ6 339 aaKnown RBP7.96□□□□□ -1.14
HTT-208ENST00000510626 RAB7BQ96AH8 199 aa7.96□□□□□ -1.14
HTT-208ENST00000510626 FEVQ99581 238 aa7.96□□□□□ -1.14
HTT-208ENST00000510626 XYLT2Q9H1B5 865 aa7.96□□□□□ -1.14
HTT-208ENST00000510626 RIMS3Q9UJD0 308 aa7.96□□□□□ -1.14
HTT-208ENST00000510626 RGS13O14921 159 aa7.96□□□□□ -1.14
HTT-208ENST00000510626 CA12O43570 354 aa7.96□□□□□ -1.14
HTT-208ENST00000510626 DUSP11O75319 330 aaKnown RBP7.96□□□□□ -1.14
HTT-208ENST00000510626 CST3P01034 146 aaPredicted RBP7.96□□□□□ -1.14
HTT-208ENST00000510626 PROS1P07225 676 aa7.96□□□□□ -1.14
HTT-208ENST00000510626 SNRPGP62308 76 aaKnown RBP7.96□□□□□ -1.14
HTT-208ENST00000510626 PXDC1Q5TGL8 231 aa7.96□□□□□ -1.14
HTT-208ENST00000510626 CLRN3Q8NCR9 226 aa7.96□□□□□ -1.14
HTT-208ENST00000510626 PRMT8Q9NR22 394 aaPredicted RBP7.96□□□□□ -1.14
HTT-208ENST00000510626 INTS1Q8N201 2190 aaKnown RBP7.96□□□□□ -1.14
HTT-208ENST00000510626 GPR89AB7ZAQ6 455 aa7.96□□□□□ -1.14
HTT-208ENST00000510626 GPR89BP0CG08 455 aa7.96□□□□□ -1.14
HTT-208ENST00000510626 CRABP1P29762 137 aa7.96□□□□□ -1.14
HTT-208ENST00000510626 SLC5A2P31639 672 aa7.96□□□□□ -1.14
HTT-208ENST00000510626 ZNF546Q86UE3 836 aa7.96□□□□□ -1.14
HTT-208ENST00000510626 OR4K14Q8NGD5 310 aa7.96□□□□□ -1.14
HTT-208ENST00000510626 THEM6Q8WUY1 208 aa7.96□□□□□ -1.14
HTT-208ENST00000510626 UBE2J1Q9Y385 318 aaPredicted RBP7.96□□□□□ -1.14
HTT-208ENST00000510626 ZFP37Q9Y6Q3 630 aaPredicted RBP7.96□□□□□ -1.14
HTT-208ENST00000510626 LRIT2A6NDA9 550 aa7.96□□□□□ -1.14
HTT-208ENST00000510626 GJE1A6NN92 205 aa7.96□□□□□ -1.14
HTT-208ENST00000510626 SLC38A8A6NNN8 435 aa7.96□□□□□ -1.14
HTT-208ENST00000510626 GPR25O00155 361 aa7.96□□□□□ -1.14
HTT-208ENST00000510626 DPM1O60762 260 aa7.96□□□□□ -1.14
HTT-208ENST00000510626 SELENOWP63302 87 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms