RNA–Protein interactions for RNA: ENST00000509330.5

PHF3-209, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best) BASIC

Gene PHF3, Length 2,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-209ENST00000509330 PUS10Q3MIT2 529 aaKnown RBP13.89□□□□□ -0.19
PHF3-209ENST00000509330 CLEC12AQ5QGZ9 265 aa13.89□□□□□ -0.19
PHF3-209ENST00000509330 TYW3Q6IPR3 259 aaKnown RBP13.89□□□□□ -0.19
PHF3-209ENST00000509330 ERI1Q8IV48 349 aaKnown RBP13.89□□□□□ -0.19
PHF3-209ENST00000509330 NKAIN4Q8IVV8 208 aa13.89□□□□□ -0.19
PHF3-209ENST00000509330 PRSS58Q8IYP2 241 aa13.89□□□□□ -0.19
PHF3-209ENST00000509330 MUL1Q969V5 352 aa13.89□□□□□ -0.19
PHF3-209ENST00000509330 SHDQ96IW2 340 aa13.89□□□□□ -0.19
PHF3-209ENST00000509330 TRNT1Q96Q11 434 aaKnown RBP13.89□□□□□ -0.19
PHF3-209ENST00000509330 CNPPD1Q9BV87 410 aa13.89□□□□□ -0.19
PHF3-209ENST00000509330 LYRM4Q9HD34 91 aa13.89□□□□□ -0.19
PHF3-209ENST00000509330 WNT16Q9UBV4 365 aa13.89□□□□□ -0.19
PHF3-209ENST00000509330 RNF215Q9Y6U7 377 aa13.89□□□□□ -0.19
PHF3-209ENST00000509330 RP1P56715 2156 aa13.89□□□□□ -0.19
PHF3-209ENST00000509330 FOXS1O43638 330 aa13.89□□□□□ -0.19
PHF3-209ENST00000509330 PRG2P13727 222 aa13.89□□□□□ -0.19
PHF3-209ENST00000509330 HNRNPKP61978 463 aaKnown RBP eCLIP13.89□□□□□ -0.19
PHF3-209ENST00000509330 MFSD4BQ5TF39 518 aa13.89□□□□□ -0.19
PHF3-209ENST00000509330 SPEM1Q8N4L4 309 aa13.89□□□□□ -0.19
PHF3-209ENST00000509330 AMER2Q8N7J2 671 aa13.89□□□□□ -0.19
PHF3-209ENST00000509330 RHOXF1Q8NHV9 184 aa13.89□□□□□ -0.19
PHF3-209ENST00000509330 MIPOL1Q8TD10 442 aa13.89□□□□□ -0.19
PHF3-209ENST00000509330 GGHQ92820 318 aa13.89□□□□□ -0.19
PHF3-209ENST00000509330 SPACA7Q96KW9 195 aa13.89□□□□□ -0.19
PHF3-209ENST00000509330 DSN1Q9H410 356 aa13.89□□□□□ -0.19
PHF3-209ENST00000509330 EGLN3Q9H6Z9 239 aa13.89□□□□□ -0.19
PHF3-209ENST00000509330 FTSJ1Q9UET6 329 aa13.89□□□□□ -0.19
PHF3-209ENST00000509330 THADAQ6YHU6 1953 aa13.88□□□□□ -0.19
PHF3-209ENST00000509330 FAAHO00519 579 aa13.88□□□□□ -0.19
PHF3-209ENST00000509330 HSMCR30P0CW71 290 aa13.88□□□□□ -0.19
PHF3-209ENST00000509330 FASLGP48023 281 aa13.88□□□□□ -0.19
PHF3-209ENST00000509330 CXCL12P48061 93 aa13.88□□□□□ -0.19
PHF3-209ENST00000509330 CDC42P60953 191 aa13.88□□□□□ -0.19
PHF3-209ENST00000509330 PRICKLE4Q2TBC4 344 aa13.88□□□□□ -0.19
PHF3-209ENST00000509330 KLHL35Q6PF15 583 aa13.88□□□□□ -0.19
PHF3-209ENST00000509330 PLEKHM3Q6ZWE6 761 aa13.88□□□□□ -0.19
PHF3-209ENST00000509330 GATAD2AQ86YP4 633 aa13.88□□□□□ -0.19
PHF3-209ENST00000509330 ZNF566Q969W8 418 aa13.88□□□□□ -0.19
PHF3-209ENST00000509330 FAM46AQ96IP4 442 aaKnown RBP13.88□□□□□ -0.19
PHF3-209ENST00000509330 SDF2Q99470 211 aa13.88□□□□□ -0.19
PHF3-209ENST00000509330 PINK1Q9BXM7 581 aa13.88□□□□□ -0.19
PHF3-209ENST00000509330 TVP23BQ9NYZ1 205 aa13.88□□□□□ -0.19
PHF3-209ENST00000509330 REV1Q9UBZ9 1251 aa13.88□□□□□ -0.19
PHF3-209ENST00000509330 MUTYHQ9UIF7 546 aa13.88□□□□□ -0.19
PHF3-209ENST00000509330 DTX4Q9Y2E6 619 aa13.88□□□□□ -0.19
PHF3-209ENST00000509330 HSPE1-MOB4S4R3N1 261 aa13.88□□□□□ -0.19
PHF3-209ENST00000509330 A0A087WUU8 490 aa13.88□□□□□ -0.19
PHF3-209ENST00000509330 KPNA4O00629 521 aaPredicted RBP13.88□□□□□ -0.19
PHF3-209ENST00000509330 APOL3O95236 402 aa13.88□□□□□ -0.19
PHF3-209ENST00000509330 OR1D4P47884 311 aa13.88□□□□□ -0.19
PHF3-209ENST00000509330 FOXL2P58012 376 aa13.88□□□□□ -0.19
PHF3-209ENST00000509330 AQP6Q13520 282 aa13.88□□□□□ -0.19
PHF3-209ENST00000509330 SPCS2Q15005 226 aa13.88□□□□□ -0.19
PHF3-209ENST00000509330 INAVAQ3KP66 663 aa13.88□□□□□ -0.19
PHF3-209ENST00000509330 ENTPD8Q5MY95 495 aa13.88□□□□□ -0.19
PHF3-209ENST00000509330 DCST2Q5T1A1 773 aa13.88□□□□□ -0.19
PHF3-209ENST00000509330 ZNF836Q6ZNA1 936 aa13.88□□□□□ -0.19
PHF3-209ENST00000509330 GALNT12Q8IXK2 581 aa13.88□□□□□ -0.19
PHF3-209ENST00000509330 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.88□□□□□ -0.19
PHF3-209ENST00000509330 RPL3LQ92901 407 aaKnown RBP13.88□□□□□ -0.19
PHF3-209ENST00000509330 PRRC1Q96M27 445 aa13.88□□□□□ -0.19
PHF3-209ENST00000509330 DHCR7Q9UBM7 475 aaKnown RBP13.88□□□□□ -0.19
PHF3-209ENST00000509330 ZNF443Q9Y2A4 671 aaPredicted RBP13.88□□□□□ -0.19
PHF3-209ENST00000509330 SIT1Q9Y3P8 196 aa13.88□□□□□ -0.19
PHF3-209ENST00000509330 PIP5K1CO60331 668 aa13.87□□□□□ -0.19
PHF3-209ENST00000509330 ADRA2AP08913 450 aa13.87□□□□□ -0.19
PHF3-209ENST00000509330 CCNA2P20248 432 aa13.87□□□□□ -0.19
PHF3-209ENST00000509330 GPR4P46093 362 aa13.87□□□□□ -0.19
PHF3-209ENST00000509330 RAB38P57729 211 aa13.87□□□□□ -0.19
PHF3-209ENST00000509330 ZNF730Q6ZMV8 503 aa13.87□□□□□ -0.19
PHF3-209ENST00000509330 VWA5B2Q8N398 1253 aa13.87□□□□□ -0.19
PHF3-209ENST00000509330 STX19Q8N4C7 294 aa13.87□□□□□ -0.19
PHF3-209ENST00000509330 DEFB123Q8N688 67 aa13.87□□□□□ -0.19
PHF3-209ENST00000509330 TCEANCQ8N8B7 351 aa13.87□□□□□ -0.19
PHF3-209ENST00000509330 MCHR1Q99705 422 aa13.87□□□□□ -0.19
PHF3-209ENST00000509330 BTBD2Q9BX70 525 aa13.87□□□□□ -0.19
PHF3-209ENST00000509330 PLA2G12AQ9BZM1 189 aa13.87□□□□□ -0.19
PHF3-209ENST00000509330 CHRDQ9H2X0 955 aa13.87□□□□□ -0.19
PHF3-209ENST00000509330 ACOT13Q9NPJ3 140 aa13.87□□□□□ -0.19
PHF3-209ENST00000509330 C19orf53Q9UNZ5 99 aaPredicted RBP13.87□□□□□ -0.19
PHF3-209ENST00000509330 LIPT1Q9Y234 373 aa13.87□□□□□ -0.19
PHF3-209ENST00000509330 HYKKA2RU49 373 aa13.87□□□□□ -0.19
PHF3-209ENST00000509330 DUXAA6NLW8 204 aa13.87□□□□□ -0.19
PHF3-209ENST00000509330 A8MUA0 341 aa13.87□□□□□ -0.19
PHF3-209ENST00000509330 BCAT2O15382 392 aaPredicted RBP13.87□□□□□ -0.19
PHF3-209ENST00000509330 PIAS2O75928 621 aa13.87□□□□□ -0.19
PHF3-209ENST00000509330 CH25HO95992 272 aa13.87□□□□□ -0.19
PHF3-209ENST00000509330 ADAP00813 363 aa13.87□□□□□ -0.19
PHF3-209ENST00000509330 IFNA16P05015 189 aa13.87□□□□□ -0.19
PHF3-209ENST00000509330 ALOX5P09917 674 aa13.87□□□□□ -0.19
PHF3-209ENST00000509330 OSMP13725 252 aa13.87□□□□□ -0.19
PHF3-209ENST00000509330 JUNBP17275 347 aaPredicted RBP13.87□□□□□ -0.19
PHF3-209ENST00000509330 VBP1P61758 197 aa13.87□□□□□ -0.19
PHF3-209ENST00000509330 ZNF267Q14586 743 aaPredicted RBP13.87□□□□□ -0.19
PHF3-209ENST00000509330 TTLL10Q6ZVT0 673 aa13.87□□□□□ -0.19
PHF3-209ENST00000509330 PRICKLE2Q7Z3G6 844 aa13.87□□□□□ -0.19
PHF3-209ENST00000509330 DNAJC22Q8N4W6 341 aa13.87□□□□□ -0.19
PHF3-209ENST00000509330 B3GNT7Q8NFL0 401 aa13.87□□□□□ -0.19
PHF3-209ENST00000509330 CADM4Q8NFZ8 388 aa13.87□□□□□ -0.19
PHF3-209ENST00000509330 OCEL1Q9H607 264 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms