RNA–Protein interactions for RNA: ENST00000508290.5

SFXN1-209, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 592 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-209ENST00000508290 PM20D2Q8IYS1 436 aa18.18■□□□□ 0.5
SFXN1-209ENST00000508290 CLHC1Q8NHS4 586 aa18.18■□□□□ 0.5
SFXN1-209ENST00000508290 RNF138Q8WVD3 245 aa18.18■□□□□ 0.5
SFXN1-209ENST00000508290 HOXB13Q92826 284 aaPredicted RBP18.18■□□□□ 0.5
SFXN1-209ENST00000508290 C3orf30Q96M34 536 aa18.18■□□□□ 0.5
SFXN1-209ENST00000508290 MS4A4EQ96PG1 132 aa18.18■□□□□ 0.5
SFXN1-209ENST00000508290 NODALQ96S42 347 aa18.18■□□□□ 0.5
SFXN1-209ENST00000508290 PAIP2Q9BPZ3 127 aaKnown RBP18.18■□□□□ 0.5
SFXN1-209ENST00000508290 TMBIM4Q9HC24 238 aa18.18■□□□□ 0.5
SFXN1-209ENST00000508290 NEUROD4Q9HD90 331 aa18.18■□□□□ 0.5
SFXN1-209ENST00000508290 SDHAF3Q9NRP4 125 aa18.18■□□□□ 0.5
SFXN1-209ENST00000508290 CBLCQ9ULV8 474 aa18.18■□□□□ 0.5
SFXN1-209ENST00000508290 LIPGQ9Y5X9 500 aa18.18■□□□□ 0.5
SFXN1-209ENST00000508290 PRSS44E7EML9 344 aa18.17■□□□□ 0.5
SFXN1-209ENST00000508290 ITM2AO43736 263 aa18.17■□□□□ 0.5
SFXN1-209ENST00000508290 KCNH1O95259 989 aa18.17■□□□□ 0.5
SFXN1-209ENST00000508290 CLDN14O95500 239 aa18.17■□□□□ 0.5
SFXN1-209ENST00000508290 BGNP21810 368 aa18.17■□□□□ 0.5
SFXN1-209ENST00000508290 PTPN6P29350 595 aa18.17■□□□□ 0.5
SFXN1-209ENST00000508290 CLK3P49761 638 aaKnown RBP18.17■□□□□ 0.5
SFXN1-209ENST00000508290 CASP8Q14790 479 aa18.17■□□□□ 0.5
SFXN1-209ENST00000508290 LSM12Q3MHD2 195 aaKnown RBP18.17■□□□□ 0.5
SFXN1-209ENST00000508290 ZNF385BQ569K4 471 aa18.17■□□□□ 0.5
SFXN1-209ENST00000508290 NHSL2Q5HYW2 709 aa18.17■□□□□ 0.5
SFXN1-209ENST00000508290 EMC4Q5J8M3 183 aa18.17■□□□□ 0.5
SFXN1-209ENST00000508290 FNDC7Q5VTL7 733 aa18.17■□□□□ 0.5
SFXN1-209ENST00000508290 BICRALQ6AI39 1079 aa18.17■□□□□ 0.5
SFXN1-209ENST00000508290 ANKRD26P1Q6NSI1 321 aa18.17■□□□□ 0.5
SFXN1-209ENST00000508290 ANKRD42Q8N9B4 389 aa18.17■□□□□ 0.5
SFXN1-209ENST00000508290 OR5P2Q8WZ92 322 aa18.17■□□□□ 0.5
SFXN1-209ENST00000508290 RND1Q92730 232 aa18.17■□□□□ 0.5
SFXN1-209ENST00000508290 CIDECQ96AQ7 238 aaPredicted RBP18.17■□□□□ 0.5
SFXN1-209ENST00000508290 MOAP1Q96BY2 351 aa18.17■□□□□ 0.5
SFXN1-209ENST00000508290 TLCD1Q96CP7 247 aa18.17■□□□□ 0.5
SFXN1-209ENST00000508290 SORT1Q99523 831 aa18.17■□□□□ 0.5
SFXN1-209ENST00000508290 BHLHE41Q9C0J9 482 aaPredicted RBP18.17■□□□□ 0.5
SFXN1-209ENST00000508290 THAP1Q9NVV9 213 aa18.17■□□□□ 0.5
SFXN1-209ENST00000508290 WIF1Q9Y5W5 379 aa18.17■□□□□ 0.5
SFXN1-209ENST00000508290 A0A1W2PRB8 838 aa18.16■□□□□ 0.5
SFXN1-209ENST00000508290 SLCO1B7G3V0H7 640 aa18.16■□□□□ 0.5
SFXN1-209ENST00000508290 EMC8O43402 210 aa18.16■□□□□ 0.5
SFXN1-209ENST00000508290 TRAPPC6AO75865 159 aa18.16■□□□□ 0.5
SFXN1-209ENST00000508290 LCN1P31025 176 aa18.16■□□□□ 0.5
SFXN1-209ENST00000508290 CLDN8P56748 225 aa18.16■□□□□ 0.5
SFXN1-209ENST00000508290 MAGOHP61326 146 aaKnown RBP18.16■□□□□ 0.5
SFXN1-209ENST00000508290 BST1Q10588 318 aa18.16■□□□□ 0.5
SFXN1-209ENST00000508290 PTGR1Q14914 329 aa18.16■□□□□ 0.5
SFXN1-209ENST00000508290 PDCD2Q16342 344 aaPredicted RBP18.16■□□□□ 0.5
SFXN1-209ENST00000508290 ZNF630Q2M218 657 aaPredicted RBP18.16■□□□□ 0.5
SFXN1-209ENST00000508290 CES4AQ5XG92 561 aa18.16■□□□□ 0.5
SFXN1-209ENST00000508290 B3GNT6Q6ZMB0 384 aa18.16■□□□□ 0.5
SFXN1-209ENST00000508290 CAMKMTQ7Z624 323 aa18.16■□□□□ 0.5
SFXN1-209ENST00000508290 PLCZ1Q86YW0 608 aa18.16■□□□□ 0.5
SFXN1-209ENST00000508290 NUP43Q8NFH3 380 aa18.16■□□□□ 0.5
SFXN1-209ENST00000508290 COQ8BQ96D53 544 aa18.16■□□□□ 0.5
SFXN1-209ENST00000508290 GNRHR2Q96P88 292 aa18.16■□□□□ 0.5
SFXN1-209ENST00000508290 C1orf50Q9BV19 199 aa18.16■□□□□ 0.5
SFXN1-209ENST00000508290 PNPLA3Q9NST1 481 aa18.16■□□□□ 0.5
SFXN1-209ENST00000508290 DIDO1Q9BTC0 2240 aaKnown RBP18.16■□□□□ 0.5
SFXN1-209ENST00000508290 UTP20O75691 2785 aaKnown RBP18.16■□□□□ 0.5
SFXN1-209ENST00000508290 UNC79Q9P2D8 2635 aa18.15■□□□□ 0.5
SFXN1-209ENST00000508290 NKX2-2O95096 273 aa18.15■□□□□ 0.5
SFXN1-209ENST00000508290 IL33O95760 270 aa18.15■□□□□ 0.5
SFXN1-209ENST00000508290 ACTL6AO96019 429 aa18.15■□□□□ 0.5
SFXN1-209ENST00000508290 KRT16P08779 473 aa18.15■□□□□ 0.5
SFXN1-209ENST00000508290 ENDOUP21128 410 aaKnown RBP18.15■□□□□ 0.5
SFXN1-209ENST00000508290 CHRNB4P30926 498 aa18.15■□□□□ 0.5
SFXN1-209ENST00000508290 PTGDSP41222 190 aa18.15■□□□□ 0.5
SFXN1-209ENST00000508290 PRIM2P49643 509 aa18.15■□□□□ 0.5
SFXN1-209ENST00000508290 AGBL2Q5U5Z8 902 aa18.15■□□□□ 0.5
SFXN1-209ENST00000508290 BHLHB9Q6PI77 547 aa18.15■□□□□ 0.5
SFXN1-209ENST00000508290 C3P1Q6ZMU1 363 aa18.15■□□□□ 0.5
SFXN1-209ENST00000508290 RIMKLAQ8IXN7 391 aa18.15■□□□□ 0.5
SFXN1-209ENST00000508290 PSMA8Q8TAA3 256 aa18.15■□□□□ 0.5
SFXN1-209ENST00000508290 CA5BP1Q8WTZ4 195 aa18.15■□□□□ 0.5
SFXN1-209ENST00000508290 SLC6A15Q9H2J7 730 aa18.15■□□□□ 0.5
SFXN1-209ENST00000508290 ARGLU1Q9NWB6 273 aaPredicted RBP18.15■□□□□ 0.5
SFXN1-209ENST00000508290 FAM120CQ9NX05 1096 aaKnown RBP18.15■□□□□ 0.5
SFXN1-209ENST00000508290 GIN1Q9NXP7 522 aa18.15■□□□□ 0.5
SFXN1-209ENST00000508290 GIMAP2Q9UG22 337 aa18.15■□□□□ 0.5
SFXN1-209ENST00000508290 MRPS18CQ9Y3D5 142 aaKnown RBP18.15■□□□□ 0.5
SFXN1-209ENST00000508290 C15orf38-AP3S2A0A0A6YYH1 394 aa18.14■□□□□ 0.49
SFXN1-209ENST00000508290 AHRRA9YTQ3 701 aa18.14■□□□□ 0.49
SFXN1-209ENST00000508290 GNB5O14775 395 aa18.14■□□□□ 0.49
SFXN1-209ENST00000508290 ZNHIT1O43257 154 aa18.14■□□□□ 0.49
SFXN1-209ENST00000508290 HNRNPRO43390 633 aaKnown RBP18.14■□□□□ 0.49
SFXN1-209ENST00000508290 G6PDP11413 515 aa18.14■□□□□ 0.49
SFXN1-209ENST00000508290 HTR1EP28566 365 aa18.14■□□□□ 0.49
SFXN1-209ENST00000508290 EVI2BP34910 448 aa18.14■□□□□ 0.49
SFXN1-209ENST00000508290 DCTP40126 519 aa18.14■□□□□ 0.49
SFXN1-209ENST00000508290 MAP3K8P41279 467 aa18.14■□□□□ 0.49
SFXN1-209ENST00000508290 WDR4P57081 412 aaKnown RBP18.14■□□□□ 0.49
SFXN1-209ENST00000508290 GAB1Q13480 694 aa18.14■□□□□ 0.49
SFXN1-209ENST00000508290 TOMM20Q15388 145 aa18.14■□□□□ 0.49
SFXN1-209ENST00000508290 DPY19L1Q2PZI1 675 aa18.14■□□□□ 0.49
SFXN1-209ENST00000508290 ZNF585AQ6P3V2 769 aa18.14■□□□□ 0.49
SFXN1-209ENST00000508290 OR56A1Q8NGH5 318 aa18.14■□□□□ 0.49
SFXN1-209ENST00000508290 OR5M9Q8NGP3 310 aa18.14■□□□□ 0.49
SFXN1-209ENST00000508290 EFHD2Q96C19 240 aaPredicted RBP18.14■□□□□ 0.49
SFXN1-209ENST00000508290 OR2B2Q9GZK3 357 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms