RNA–Protein interactions for RNA: ENST00000507257.5

NUP54-205, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 1,938 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-205ENST00000507257 ACTR6Q9GZN1 396 aa16.68■□□□□ 0.26
NUP54-205ENST00000507257 RHBGQ9H310 441 aa16.68■□□□□ 0.26
NUP54-205ENST00000507257 GPR52Q9Y2T5 361 aa16.68■□□□□ 0.26
NUP54-205ENST00000507257 DNMT3AQ9Y6K1 912 aaPredicted RBP16.68■□□□□ 0.26
NUP54-205ENST00000507257 A0A087WUU8 490 aa16.68■□□□□ 0.26
NUP54-205ENST00000507257 CD8B2A6NJW9 211 aa16.68■□□□□ 0.26
NUP54-205ENST00000507257 AGRPO00253 132 aa16.68■□□□□ 0.26
NUP54-205ENST00000507257 SURF4O15260 269 aa16.68■□□□□ 0.26
NUP54-205ENST00000507257 RNF13O43567 381 aa16.68■□□□□ 0.26
NUP54-205ENST00000507257 EPPINO95925 133 aa16.68■□□□□ 0.26
NUP54-205ENST00000507257 CD8BP10966 210 aa16.68■□□□□ 0.26
NUP54-205ENST00000507257 ACP5P13686 325 aa16.68■□□□□ 0.26
NUP54-205ENST00000507257 CTSOP43234 321 aaPredicted RBP16.68■□□□□ 0.26
NUP54-205ENST00000507257 GALEQ14376 348 aa16.68■□□□□ 0.26
NUP54-205ENST00000507257 TRAM1Q15629 374 aa16.68■□□□□ 0.26
NUP54-205ENST00000507257 CCDC85BQ15834 202 aaPredicted RBP16.68■□□□□ 0.26
NUP54-205ENST00000507257 SLC36A2Q495M3 483 aa16.68■□□□□ 0.26
NUP54-205ENST00000507257 IDNKQ5T6J7 187 aa16.68■□□□□ 0.26
NUP54-205ENST00000507257 PXDC1Q5TGL8 231 aa16.68■□□□□ 0.26
NUP54-205ENST00000507257 SMARCD3Q6STE5 483 aa16.68■□□□□ 0.26
NUP54-205ENST00000507257 RTL4Q6ZR62 310 aa16.68■□□□□ 0.26
NUP54-205ENST00000507257 Q6ZVL8 140 aa16.68■□□□□ 0.26
NUP54-205ENST00000507257 PRSS42Q7Z5A4 293 aa16.68■□□□□ 0.26
NUP54-205ENST00000507257 NR2C2APQ86WQ0 139 aa16.68■□□□□ 0.26
NUP54-205ENST00000507257 OR6T1Q8NGN1 323 aa16.68■□□□□ 0.26
NUP54-205ENST00000507257 OR8K5Q8NH50 307 aa16.68■□□□□ 0.26
NUP54-205ENST00000507257 NXPE2Q96DL1 559 aa16.68■□□□□ 0.26
NUP54-205ENST00000507257 RIOK2Q9BVS4 552 aaKnown RBP16.68■□□□□ 0.26
NUP54-205ENST00000507257 PPA2Q9H2U2 334 aa16.68■□□□□ 0.26
NUP54-205ENST00000507257 FAM8A1Q9UBU6 413 aa16.68■□□□□ 0.26
NUP54-205ENST00000507257 C2orf92A0A1B0GVN3 265 aa16.67■□□□□ 0.26
NUP54-205ENST00000507257 SYT5O00445 386 aa16.67■□□□□ 0.26
NUP54-205ENST00000507257 PLPP1O14494 284 aa16.67■□□□□ 0.26
NUP54-205ENST00000507257 HOXA2O43364 376 aa16.67■□□□□ 0.26
NUP54-205ENST00000507257 PI15O43692 258 aa16.67■□□□□ 0.26
NUP54-205ENST00000507257 SOX30O94993 753 aa16.67■□□□□ 0.26
NUP54-205ENST00000507257 EIF4EP06730 217 aaKnown RBP16.67■□□□□ 0.26
NUP54-205ENST00000507257 RPL17P18621 184 aaKnown RBP16.67■□□□□ 0.26
NUP54-205ENST00000507257 F8A1P23610 371 aa16.67■□□□□ 0.26
NUP54-205ENST00000507257 PDHA2P29803 388 aa16.67■□□□□ 0.26
NUP54-205ENST00000507257 STAT5AP42229 794 aa16.67■□□□□ 0.26
NUP54-205ENST00000507257 SOX9P48436 509 aa16.67■□□□□ 0.26
NUP54-205ENST00000507257 CCT3P49368 545 aaKnown RBP16.67■□□□□ 0.26
NUP54-205ENST00000507257 GATMP50440 423 aa16.67■□□□□ 0.26
NUP54-205ENST00000507257 RAB14P61106 215 aa16.67■□□□□ 0.26
NUP54-205ENST00000507257 GNA13Q14344 377 aa16.67■□□□□ 0.26
NUP54-205ENST00000507257 SYPL1Q16563 259 aa16.67■□□□□ 0.26
NUP54-205ENST00000507257 C9orf131Q5VYM1 1079 aa16.67■□□□□ 0.26
NUP54-205ENST00000507257 FAAH2Q6GMR7 532 aa16.67■□□□□ 0.26
NUP54-205ENST00000507257 ASB18Q6ZVZ8 466 aa16.67■□□□□ 0.26
NUP54-205ENST00000507257 SHFQ7M4L6 423 aa16.67■□□□□ 0.26
NUP54-205ENST00000507257 KRT78Q8N1N4 520 aa16.67■□□□□ 0.26
NUP54-205ENST00000507257 GALNT11Q8NCW6 608 aa16.67■□□□□ 0.26
NUP54-205ENST00000507257 OR4F15Q8NGB8 312 aa16.67■□□□□ 0.26
NUP54-205ENST00000507257 HSD17B8Q92506 261 aa16.67■□□□□ 0.26
NUP54-205ENST00000507257 ZNF689Q96CS4 500 aaPredicted RBP16.67■□□□□ 0.26
NUP54-205ENST00000507257 MSANTD3Q96H12 275 aa16.67■□□□□ 0.26
NUP54-205ENST00000507257 SLC35G5Q96KT7 338 aa16.67■□□□□ 0.26
NUP54-205ENST00000507257 RBP7Q96R05 134 aa16.67■□□□□ 0.26
NUP54-205ENST00000507257 PINK1Q9BXM7 581 aa16.67■□□□□ 0.26
NUP54-205ENST00000507257 GSX2Q9BZM3 304 aa16.67■□□□□ 0.26
NUP54-205ENST00000507257 UCKL1Q9NWZ5 548 aa16.67■□□□□ 0.26
NUP54-205ENST00000507257 HCSTQ9UBK5 93 aa16.67■□□□□ 0.26
NUP54-205ENST00000507257 KIF25Q9UIL4 384 aa16.67■□□□□ 0.26
NUP54-205ENST00000507257 ENTPD4Q9Y227 616 aa16.67■□□□□ 0.26
NUP54-205ENST00000507257 UTRNP46939 3433 aa16.67■□□□□ 0.26
NUP54-205ENST00000507257 TSPAN11A1L157 253 aa16.66■□□□□ 0.26
NUP54-205ENST00000507257 GPR171O14626 319 aa16.66■□□□□ 0.26
NUP54-205ENST00000507257 PRRG1O14668 218 aa16.66■□□□□ 0.26
NUP54-205ENST00000507257 SCO1O75880 301 aa16.66■□□□□ 0.26
NUP54-205ENST00000507257 MPC2O95563 127 aa16.66■□□□□ 0.26
NUP54-205ENST00000507257 ALDH1A1P00352 501 aa16.66■□□□□ 0.26
NUP54-205ENST00000507257 URODP06132 367 aa16.66■□□□□ 0.26
NUP54-205ENST00000507257 BSGP35613 385 aa16.66■□□□□ 0.26
NUP54-205ENST00000507257 NNMTP40261 264 aa16.66■□□□□ 0.26
NUP54-205ENST00000507257 PUDPQ08623 228 aa16.66■□□□□ 0.26
NUP54-205ENST00000507257 MAP4K2Q12851 820 aa16.66■□□□□ 0.26
NUP54-205ENST00000507257 POU4F3Q15319 338 aa16.66■□□□□ 0.26
NUP54-205ENST00000507257 BHLHB9Q6PI77 547 aa16.66■□□□□ 0.26
NUP54-205ENST00000507257 LCTLQ6UWM7 567 aa16.66■□□□□ 0.26
NUP54-205ENST00000507257 DNAH12Q6ZR08 3092 aa16.66■□□□□ 0.26
NUP54-205ENST00000507257 FAM129CQ86XR2 697 aa16.66■□□□□ 0.26
NUP54-205ENST00000507257 NPAS4Q8IUM7 802 aa16.66■□□□□ 0.26
NUP54-205ENST00000507257 ARL14EPQ8N8R7 260 aaPredicted RBP16.66■□□□□ 0.26
NUP54-205ENST00000507257 SUN3Q8TAQ9 357 aa16.66■□□□□ 0.26
NUP54-205ENST00000507257 AHCYL2Q96HN2 611 aaKnown RBP16.66■□□□□ 0.26
NUP54-205ENST00000507257 DLL4Q9NR61 685 aa16.66■□□□□ 0.26
NUP54-205ENST00000507257 IL20Q9NYY1 176 aa16.66■□□□□ 0.26
NUP54-205ENST00000507257 PTGFRNQ9P2B2 879 aa16.66■□□□□ 0.26
NUP54-205ENST00000507257 PRKAG2Q9UGJ0 569 aa16.66■□□□□ 0.26
NUP54-205ENST00000507257 SLC25A13Q9UJS0 675 aa16.66■□□□□ 0.26
NUP54-205ENST00000507257 MAB21L2Q9Y586 359 aa16.66■□□□□ 0.26
NUP54-205ENST00000507257 PLXND1Q9Y4D7 1925 aa16.66■□□□□ 0.26
NUP54-205ENST00000507257 KHNYNO15037 678 aaKnown RBP16.66■□□□□ 0.26
NUP54-205ENST00000507257 EEF1E1O43324 174 aaKnown RBP16.66■□□□□ 0.26
NUP54-205ENST00000507257 NR2F1P10589 423 aa16.66■□□□□ 0.26
NUP54-205ENST00000507257 CXCL3P19876 107 aa16.66■□□□□ 0.26
NUP54-205ENST00000507257 DNASE1P24855 282 aa16.66■□□□□ 0.26
NUP54-205ENST00000507257 FPR3P25089 353 aa16.66■□□□□ 0.26
NUP54-205ENST00000507257 ANXA11P50995 505 aaKnown RBP16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms