RNA–Protein interactions for RNA: ENST00000507162.1

VCAN-207, Transcript of versican, humanhuman

TSL 3

Gene VCAN, Length 766 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-207ENST00000507162 PELOQ9BRX2 385 aaKnown RBP6.36□□□□□ -1.39
VCAN-207ENST00000507162 TBCDQ9BTW9 1192 aa6.36□□□□□ -1.39
VCAN-207ENST00000507162 C1QTNF6Q9BXI9 259 aa6.36□□□□□ -1.39
VCAN-207ENST00000507162 RASSF4Q9H2L5 321 aa6.36□□□□□ -1.39
VCAN-207ENST00000507162 MMP27Q9H306 513 aa6.36□□□□□ -1.39
VCAN-207ENST00000507162 MYOZ1Q9NP98 299 aaPredicted RBP6.36□□□□□ -1.39
VCAN-207ENST00000507162 RAB6BQ9NRW1 208 aa6.36□□□□□ -1.39
VCAN-207ENST00000507162 GLRX2Q9NS18 164 aa6.36□□□□□ -1.39
VCAN-207ENST00000507162 INTS10Q9NVR2 710 aaKnown RBP6.36□□□□□ -1.39
VCAN-207ENST00000507162 ANO10Q9NW15 660 aa6.36□□□□□ -1.39
VCAN-207ENST00000507162 MED11Q9P086 117 aa6.36□□□□□ -1.39
VCAN-207ENST00000507162 PDP1Q9P0J1 537 aaPredicted RBP6.36□□□□□ -1.39
VCAN-207ENST00000507162 MCTS1Q9ULC4 181 aaKnown RBP6.36□□□□□ -1.39
VCAN-207ENST00000507162 CAPN11Q9UMQ6 739 aa6.36□□□□□ -1.39
VCAN-207ENST00000507162 MGAT4BQ9UQ53 548 aa6.36□□□□□ -1.39
VCAN-207ENST00000507162 EFR3BQ9Y2G0 817 aa6.36□□□□□ -1.39
VCAN-207ENST00000507162 SPEF1Q9Y4P9 236 aa6.36□□□□□ -1.39
VCAN-207ENST00000507162 LOC105371242A0A075B767 164 aa6.35□□□□□ -1.39
VCAN-207ENST00000507162 GOLGA6L10A0A0M3HER8 536 aa6.35□□□□□ -1.39
VCAN-207ENST00000507162 A0A1B0GTH6 734 aa6.35□□□□□ -1.39
VCAN-207ENST00000507162 OR2M5A3KFT3 312 aa6.35□□□□□ -1.39
VCAN-207ENST00000507162 C17orf51A8MQB3 221 aa6.35□□□□□ -1.39
VCAN-207ENST00000507162 SAP18O00422 153 aaKnown RBP6.35□□□□□ -1.39
VCAN-207ENST00000507162 CLGNO14967 610 aa6.35□□□□□ -1.39
VCAN-207ENST00000507162 ETS1P14921 441 aa6.35□□□□□ -1.39
VCAN-207ENST00000507162 APOBEC3AP31941 199 aaPredicted RBP6.35□□□□□ -1.39
VCAN-207ENST00000507162 AP1S2P56377 157 aa6.35□□□□□ -1.39
VCAN-207ENST00000507162 IL13RA1P78552 427 aa6.35□□□□□ -1.39
VCAN-207ENST00000507162 POU4F1Q01851 419 aa6.35□□□□□ -1.39
VCAN-207ENST00000507162 CHRNEQ04844 493 aa6.35□□□□□ -1.39
VCAN-207ENST00000507162 MAP4K2Q12851 820 aa6.35□□□□□ -1.39
VCAN-207ENST00000507162 THOC5Q13769 683 aaKnown RBP6.35□□□□□ -1.39
VCAN-207ENST00000507162 NR1I3Q14994 352 aa6.35□□□□□ -1.39
VCAN-207ENST00000507162 MLC1Q15049 377 aa6.35□□□□□ -1.39
VCAN-207ENST00000507162 TRIP10Q15642 601 aa6.35□□□□□ -1.39
VCAN-207ENST00000507162 ADPRMQ3LIE5 342 aa6.35□□□□□ -1.39
VCAN-207ENST00000507162 TMEM201Q5SNT2 666 aa6.35□□□□□ -1.39
VCAN-207ENST00000507162 LGSNQ5TDP6 509 aa6.35□□□□□ -1.39
VCAN-207ENST00000507162 ZNF470Q6ECI4 717 aa6.35□□□□□ -1.39
VCAN-207ENST00000507162 GTF2IRD2BQ6EKJ0 949 aa6.35□□□□□ -1.39
VCAN-207ENST00000507162 ADNP2Q6IQ32 1131 aa6.35□□□□□ -1.39
VCAN-207ENST00000507162 LRRC8EQ6NSJ5 796 aa6.35□□□□□ -1.39
VCAN-207ENST00000507162 Q6ZPA2 131 aa6.35□□□□□ -1.39
VCAN-207ENST00000507162 SLCO4C1Q6ZQN7 724 aa6.35□□□□□ -1.39
VCAN-207ENST00000507162 SLC46A3Q7Z3Q1 461 aa6.35□□□□□ -1.39
VCAN-207ENST00000507162 VN1R5Q7Z5H4 357 aa6.35□□□□□ -1.39
VCAN-207ENST00000507162 GTF2IRD2Q86UP8 949 aa6.35□□□□□ -1.39
VCAN-207ENST00000507162 GPR180Q86V85 440 aa6.35□□□□□ -1.39
VCAN-207ENST00000507162 RELL1Q8IUW5 271 aa6.35□□□□□ -1.39
VCAN-207ENST00000507162 DENND6AQ8IWF6 608 aa6.35□□□□□ -1.39
VCAN-207ENST00000507162 ZNF615Q8N8J6 731 aa6.35□□□□□ -1.39
VCAN-207ENST00000507162 SRFBP1Q8NEF9 429 aaKnown RBP6.35□□□□□ -1.39
VCAN-207ENST00000507162 TMEM186Q96B77 213 aa6.35□□□□□ -1.39
VCAN-207ENST00000507162 NAP1L3Q99457 506 aaPredicted RBP6.35□□□□□ -1.39
VCAN-207ENST00000507162 INPP5KQ9BT40 448 aa6.35□□□□□ -1.39
VCAN-207ENST00000507162 KIFC1Q9BW19 673 aa6.35□□□□□ -1.39
VCAN-207ENST00000507162 SORBS1Q9BX66 1292 aaKnown RBP6.35□□□□□ -1.39
VCAN-207ENST00000507162 IL22Q9GZX6 179 aa6.35□□□□□ -1.39
VCAN-207ENST00000507162 SLITRK2Q9H156 845 aa6.35□□□□□ -1.39
VCAN-207ENST00000507162 CXorf21Q9HAI6 301 aa6.35□□□□□ -1.39
VCAN-207ENST00000507162 NPAP1Q9NZP6 1156 aa6.35□□□□□ -1.39
VCAN-207ENST00000507162 BCAP29Q9UHQ4 241 aa6.35□□□□□ -1.39
VCAN-207ENST00000507162 DMGDHQ9UI17 866 aaKnown RBP6.35□□□□□ -1.39
VCAN-207ENST00000507162 COMMD10Q9Y6G5 202 aa6.35□□□□□ -1.39
VCAN-207ENST00000507162 SHISA8B8ZZ34 492 aa6.34□□□□□ -1.39
VCAN-207ENST00000507162 M0QZ24 198 aa6.34□□□□□ -1.39
VCAN-207ENST00000507162 M0R1B8 84 aa6.34□□□□□ -1.39
VCAN-207ENST00000507162 SCAMP2O15127 329 aaKnown RBP6.34□□□□□ -1.39
VCAN-207ENST00000507162 CXCL13O43927 109 aa6.34□□□□□ -1.39
VCAN-207ENST00000507162 HAUS5O94927 633 aa6.34□□□□□ -1.39
VCAN-207ENST00000507162 WDR47O94967 919 aa6.34□□□□□ -1.39
VCAN-207ENST00000507162 SLU7O95391 586 aaKnown RBP6.34□□□□□ -1.39
VCAN-207ENST00000507162 TACSTD2P09758 323 aa6.34□□□□□ -1.39
VCAN-207ENST00000507162 CT62P0C5K7 136 aa6.34□□□□□ -1.39
VCAN-207ENST00000507162 SLC35E2BP0CK96 405 aa6.34□□□□□ -1.39
VCAN-207ENST00000507162 SLC35E2P0CK97 266 aa6.34□□□□□ -1.39
VCAN-207ENST00000507162 GNAZP19086 355 aa6.34□□□□□ -1.39
VCAN-207ENST00000507162 GPX3P22352 226 aa6.34□□□□□ -1.39
VCAN-207ENST00000507162 HIST1H1TP22492 207 aaPredicted RBP6.34□□□□□ -1.39
VCAN-207ENST00000507162 PTAFRP25105 342 aa6.34□□□□□ -1.39
VCAN-207ENST00000507162 CD40P25942 277 aa6.34□□□□□ -1.39
VCAN-207ENST00000507162 AGTR1P30556 359 aa6.34□□□□□ -1.39
VCAN-207ENST00000507162 GCH1P30793 250 aa6.34□□□□□ -1.39
VCAN-207ENST00000507162 BUD31P41223 144 aaPredicted RBP6.34□□□□□ -1.39
VCAN-207ENST00000507162 GDF5P43026 501 aa6.34□□□□□ -1.39
VCAN-207ENST00000507162 SSR2P43308 183 aa6.34□□□□□ -1.39
VCAN-207ENST00000507162 PPP1R3AQ16821 1122 aa6.34□□□□□ -1.39
VCAN-207ENST00000507162 C6orf163Q5TEZ5 329 aa6.34□□□□□ -1.39
VCAN-207ENST00000507162 KLHL17Q6TDP4 642 aa6.34□□□□□ -1.39
VCAN-207ENST00000507162 TFAP2EQ6VUC0 442 aa6.34□□□□□ -1.39
VCAN-207ENST00000507162 RBMS3Q6XE24 437 aaKnown RBP6.34□□□□□ -1.39
VCAN-207ENST00000507162 TUSC5Q8IXB3 177 aa6.34□□□□□ -1.39
VCAN-207ENST00000507162 OR52N5Q8NH56 324 aa6.34□□□□□ -1.39
VCAN-207ENST00000507162 OR10D3Q8NH80 312 aa6.34□□□□□ -1.39
VCAN-207ENST00000507162 TMBIM1Q969X1 311 aa6.34□□□□□ -1.39
VCAN-207ENST00000507162 MTBPQ96DY7 904 aa6.34□□□□□ -1.39
VCAN-207ENST00000507162 COL21A1Q96P44 957 aa6.34□□□□□ -1.39
VCAN-207ENST00000507162 ADOQ96SZ5 270 aa6.34□□□□□ -1.39
VCAN-207ENST00000507162 NDNQ99608 321 aa6.34□□□□□ -1.39
VCAN-207ENST00000507162 DDX47Q9H0S4 455 aaKnown RBP6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms