RNA–Protein interactions for RNA: ENST00000506679.5

GYPB-207, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 606 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-207ENST00000506679 FZR1Q9UM11 496 aa2.04□□□□□ -2.08
GYPB-207ENST00000506679 CELA1Q9UNI1 258 aa2.04□□□□□ -2.08
GYPB-207ENST00000506679 CA5BQ9Y2D0 317 aa2.04□□□□□ -2.08
GYPB-207ENST00000506679 PLEKHA6Q9Y2H5 1048 aa2.04□□□□□ -2.08
GYPB-207ENST00000506679 CFAP73A6NFT4 308 aa2.03□□□□□ -2.08
GYPB-207ENST00000506679 H3BMH7 237 aa2.03□□□□□ -2.08
GYPB-207ENST00000506679 HAT1O14929 419 aa2.03□□□□□ -2.08
GYPB-207ENST00000506679 SLC4A1P02730 911 aa2.03□□□□□ -2.08
GYPB-207ENST00000506679 ZP3P21754 424 aa2.03□□□□□ -2.08
GYPB-207ENST00000506679 PTPN6P29350 595 aa2.03□□□□□ -2.08
GYPB-207ENST00000506679 SFNP31947 248 aa2.03□□□□□ -2.08
GYPB-207ENST00000506679 RGRP47804 291 aa2.03□□□□□ -2.08
GYPB-207ENST00000506679 RPS6P62753 249 aaKnown RBP2.03□□□□□ -2.08
GYPB-207ENST00000506679 HERVK_113P63132 956 aa2.03□□□□□ -2.08
GYPB-207ENST00000506679 ERVK-8P63133 956 aa2.03□□□□□ -2.08
GYPB-207ENST00000506679 MRPS6P82932 125 aaKnown RBP2.03□□□□□ -2.08
GYPB-207ENST00000506679 MYBPC1Q00872 1141 aa2.03□□□□□ -2.08
GYPB-207ENST00000506679 IL9RQ01113 521 aa2.03□□□□□ -2.08
GYPB-207ENST00000506679 CD47Q08722 323 aa2.03□□□□□ -2.08
GYPB-207ENST00000506679 PPP2R5CQ13362 524 aa2.03□□□□□ -2.08
GYPB-207ENST00000506679 SNX1Q13596 522 aa2.03□□□□□ -2.08
GYPB-207ENST00000506679 ZNF79Q15937 498 aa2.03□□□□□ -2.08
GYPB-207ENST00000506679 ISXQ2M1V0 245 aa2.03□□□□□ -2.08
GYPB-207ENST00000506679 CYBRD1Q53TN4 286 aa2.03□□□□□ -2.08
GYPB-207ENST00000506679 UFSP1Q6NVU6 142 aa2.03□□□□□ -2.08
GYPB-207ENST00000506679 WDR88Q6ZMY6 472 aa2.03□□□□□ -2.08
GYPB-207ENST00000506679 MIER3Q7Z3K6 550 aa2.03□□□□□ -2.08
GYPB-207ENST00000506679 NET1Q7Z628 596 aaPredicted RBP2.03□□□□□ -2.08
GYPB-207ENST00000506679 APOBEC3FQ8IUX4 373 aaKnown RBP2.03□□□□□ -2.08
GYPB-207ENST00000506679 C9orf40Q8IXQ3 194 aa2.03□□□□□ -2.08
GYPB-207ENST00000506679 MINDY2Q8NBR6 621 aa2.03□□□□□ -2.08
GYPB-207ENST00000506679 NFAM1Q8NET5 270 aaPredicted RBP2.03□□□□□ -2.08
GYPB-207ENST00000506679 CCDC26Q8TAB7 109 aa2.03□□□□□ -2.08
GYPB-207ENST00000506679 ADIPOR1Q96A54 375 aa2.03□□□□□ -2.08
GYPB-207ENST00000506679 FAM122AQ96E09 287 aa2.03□□□□□ -2.08
GYPB-207ENST00000506679 CYYR1Q96J86 154 aa2.03□□□□□ -2.08
GYPB-207ENST00000506679 B3GALT6Q96L58 329 aa2.03□□□□□ -2.08
GYPB-207ENST00000506679 ERVK-6Q9BXR3 956 aa2.03□□□□□ -2.08
GYPB-207ENST00000506679 ELOVL4Q9GZR5 314 aa2.03□□□□□ -2.08
GYPB-207ENST00000506679 RSPH9Q9H1X1 276 aaPredicted RBP2.03□□□□□ -2.08
GYPB-207ENST00000506679 ZNF702PQ9H963 129 aa2.03□□□□□ -2.08
GYPB-207ENST00000506679 MIEF1Q9NQG6 463 aa2.03□□□□□ -2.08
GYPB-207ENST00000506679 CNOT2Q9NZN8 540 aaKnown RBP2.03□□□□□ -2.08
GYPB-207ENST00000506679 SLC2A6Q9UGQ3 507 aa2.03□□□□□ -2.08
GYPB-207ENST00000506679 APOBEC3BQ9UH17 382 aaKnown RBP2.03□□□□□ -2.08
GYPB-207ENST00000506679 IL20RAQ9UHF4 553 aa2.03□□□□□ -2.08
GYPB-207ENST00000506679 BCAP29Q9UHQ4 241 aa2.03□□□□□ -2.08
GYPB-207ENST00000506679 CCPG1Q9ULG6 757 aa2.03□□□□□ -2.08
GYPB-207ENST00000506679 BARX2Q9UMQ3 279 aaPredicted RBP2.03□□□□□ -2.08
GYPB-207ENST00000506679 EXOSC1Q9Y3B2 195 aaKnown RBP2.03□□□□□ -2.08
GYPB-207ENST00000506679 RAI1Q7Z5J4 1906 aaPredicted RBP2.03□□□□□ -2.08
GYPB-207ENST00000506679 UBE4BO95155 1302 aa2.02□□□□□ -2.09
GYPB-207ENST00000506679 IGLV8-61A0A075B6I0 122 aa2.02□□□□□ -2.09
GYPB-207ENST00000506679 SYCE3A1L190 88 aa2.02□□□□□ -2.09
GYPB-207ENST00000506679 RNF222A6NCQ9 220 aa2.02□□□□□ -2.09
GYPB-207ENST00000506679 TRIM64A6NGJ6 449 aa2.02□□□□□ -2.09
GYPB-207ENST00000506679 TRIM64BA6NI03 449 aa2.02□□□□□ -2.09
GYPB-207ENST00000506679 ARHGAP42A6NI28 874 aa2.02□□□□□ -2.09
GYPB-207ENST00000506679 TNFSF11O14788 317 aa2.02□□□□□ -2.09
GYPB-207ENST00000506679 ALOX15BO15296 676 aa2.02□□□□□ -2.09
GYPB-207ENST00000506679 HDAC3O15379 428 aa2.02□□□□□ -2.09
GYPB-207ENST00000506679 LYPD3O95274 346 aa2.02□□□□□ -2.09
GYPB-207ENST00000506679 MT-ND3P03897 115 aa2.02□□□□□ -2.09
GYPB-207ENST00000506679 ALPPP05187 535 aa2.02□□□□□ -2.09
GYPB-207ENST00000506679 SLC35G4P0C7Q5 338 aa2.02□□□□□ -2.09
GYPB-207ENST00000506679 ALPPL2P10696 532 aa2.02□□□□□ -2.09
GYPB-207ENST00000506679 SDC1P18827 310 aa2.02□□□□□ -2.09
GYPB-207ENST00000506679 PRDX6P30041 224 aa2.02□□□□□ -2.09
GYPB-207ENST00000506679 PRKAR2BP31323 418 aa2.02□□□□□ -2.09
GYPB-207ENST00000506679 PRDX2P32119 198 aa2.02□□□□□ -2.09
GYPB-207ENST00000506679 GPC3P51654 580 aa2.02□□□□□ -2.09
GYPB-207ENST00000506679 NOP14P78316 857 aaKnown RBP2.02□□□□□ -2.09
GYPB-207ENST00000506679 IL18R1Q13478 541 aa2.02□□□□□ -2.09
GYPB-207ENST00000506679 BTG3Q14201 252 aaPredicted RBP2.02□□□□□ -2.09
GYPB-207ENST00000506679 GAMTQ14353 236 aa2.02□□□□□ -2.09
GYPB-207ENST00000506679 PDIA5Q14554 519 aa2.02□□□□□ -2.09
GYPB-207ENST00000506679 RAB35Q15286 201 aa2.02□□□□□ -2.09
GYPB-207ENST00000506679 PRR4Q16378 134 aa2.02□□□□□ -2.09
GYPB-207ENST00000506679 PKN2Q16513 984 aaKnown RBP2.02□□□□□ -2.09
GYPB-207ENST00000506679 CAMK4Q16566 473 aa2.02□□□□□ -2.09
GYPB-207ENST00000506679 CARTPTQ16568 116 aa2.02□□□□□ -2.09
GYPB-207ENST00000506679 GLYR1Q49A26 553 aaPredicted RBP2.02□□□□□ -2.09
GYPB-207ENST00000506679 ZNF57Q68EA5 555 aaPredicted RBP2.02□□□□□ -2.09
GYPB-207ENST00000506679 DMKNQ6E0U4 476 aaPredicted RBP2.02□□□□□ -2.09
GYPB-207ENST00000506679 PNCKQ6P2M8 343 aa2.02□□□□□ -2.09
GYPB-207ENST00000506679 PARGQ86W56 976 aa2.02□□□□□ -2.09
GYPB-207ENST00000506679 FBXO16Q8IX29 292 aaPredicted RBP2.02□□□□□ -2.09
GYPB-207ENST00000506679 ELMOD2Q8IZ81 293 aa2.02□□□□□ -2.09
GYPB-207ENST00000506679 RNF148Q8N7C7 305 aa2.02□□□□□ -2.09
GYPB-207ENST00000506679 ZNF564Q8TBZ8 553 aaPredicted RBP2.02□□□□□ -2.09
GYPB-207ENST00000506679 ADAMTS16Q8TE57 1224 aa2.02□□□□□ -2.09
GYPB-207ENST00000506679 NCLNQ969V3 563 aa2.02□□□□□ -2.09
GYPB-207ENST00000506679 C18orf25Q96B23 403 aaPredicted RBP2.02□□□□□ -2.09
GYPB-207ENST00000506679 ZNF414Q96IQ9 312 aa2.02□□□□□ -2.09
GYPB-207ENST00000506679 CARD6Q9BX69 1037 aa2.02□□□□□ -2.09
GYPB-207ENST00000506679 TEX13BQ9BXU2 312 aa2.02□□□□□ -2.09
GYPB-207ENST00000506679 NMNAT2Q9BZQ4 307 aa2.02□□□□□ -2.09
GYPB-207ENST00000506679 XPO4Q9C0E2 1151 aaKnown RBP2.02□□□□□ -2.09
GYPB-207ENST00000506679 NACA2Q9H009 215 aa2.02□□□□□ -2.09
GYPB-207ENST00000506679 ATG10Q9H0Y0 220 aa2.02□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms