RNA–Protein interactions for RNA: ENST00000506515.1

HERC4-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-213ENST00000506515 TAAR6Q96RI8 345 aa4.85□□□□□ -1.63
HERC4-213ENST00000506515 SPAG8Q99932 426 aaPredicted RBP4.85□□□□□ -1.63
HERC4-213ENST00000506515 UPF3BQ9BZI7 483 aaKnown RBP4.85□□□□□ -1.63
HERC4-213ENST00000506515 LIME1Q9H400 295 aa4.85□□□□□ -1.63
HERC4-213ENST00000506515 MOB1AQ9H8S9 216 aa4.85□□□□□ -1.63
HERC4-213ENST00000506515 THYN1Q9P016 225 aa4.85□□□□□ -1.63
HERC4-213ENST00000506515 MOB4Q9Y3A3 225 aa4.85□□□□□ -1.63
HERC4-213ENST00000506515 AUP1Q9Y679 476 aa4.85□□□□□ -1.63
HERC4-213ENST00000506515 ARAP2Q8WZ64 1704 aa4.84□□□□□ -1.63
HERC4-213ENST00000506515 COL2A1P02458 1487 aaPredicted RBP4.84□□□□□ -1.63
HERC4-213ENST00000506515 A0A0U1RRA0 63 aa4.84□□□□□ -1.63
HERC4-213ENST00000506515 RNF103-CHMP3A0A140T963 221 aa4.84□□□□□ -1.63
HERC4-213ENST00000506515 MEI4A8MW99 385 aa4.84□□□□□ -1.63
HERC4-213ENST00000506515 EPM2AB3EWF7 344 aa4.84□□□□□ -1.63
HERC4-213ENST00000506515 SYNGR4O95473 234 aa4.84□□□□□ -1.63
HERC4-213ENST00000506515 TIMP1P01033 207 aa4.84□□□□□ -1.63
HERC4-213ENST00000506515 SLC1A6P48664 564 aa4.84□□□□□ -1.63
HERC4-213ENST00000506515 CCL11P51671 97 aa4.84□□□□□ -1.63
HERC4-213ENST00000506515 HMGCS2P54868 508 aa4.84□□□□□ -1.63
HERC4-213ENST00000506515 SSTP61278 116 aa4.84□□□□□ -1.63
HERC4-213ENST00000506515 CD300CQ08708 224 aa4.84□□□□□ -1.63
HERC4-213ENST00000506515 FASTKQ14296 549 aaKnown RBP4.84□□□□□ -1.63
HERC4-213ENST00000506515 MUC21Q5SSG8 566 aa4.84□□□□□ -1.63
HERC4-213ENST00000506515 BEND3Q5T5X7 828 aa4.84□□□□□ -1.63
HERC4-213ENST00000506515 DDI2Q5TDH0 399 aa4.84□□□□□ -1.63
HERC4-213ENST00000506515 LIPJQ5W064 366 aa4.84□□□□□ -1.63
HERC4-213ENST00000506515 STEAP1BQ6NZ63 245 aa4.84□□□□□ -1.63
HERC4-213ENST00000506515 STXBP4Q6ZWJ1 553 aa4.84□□□□□ -1.63
HERC4-213ENST00000506515 ZNF440Q8IYI8 595 aa4.84□□□□□ -1.63
HERC4-213ENST00000506515 LINC00518Q8N0U6 118 aa4.84□□□□□ -1.63
HERC4-213ENST00000506515 CHDHQ8NE62 594 aaPredicted RBP4.84□□□□□ -1.63
HERC4-213ENST00000506515 C16orf58Q96GQ5 468 aa4.84□□□□□ -1.63
HERC4-213ENST00000506515 CDHR1Q96JP9 859 aa4.84□□□□□ -1.63
HERC4-213ENST00000506515 COQ7Q99807 217 aa4.84□□□□□ -1.63
HERC4-213ENST00000506515 CHCHD5Q9BSY4 110 aa4.84□□□□□ -1.63
HERC4-213ENST00000506515 DCTN5Q9BTE1 182 aa4.84□□□□□ -1.63
HERC4-213ENST00000506515 SIRPDQ9H106 197 aa4.84□□□□□ -1.63
HERC4-213ENST00000506515 NT5DC2Q9H857 520 aa4.84□□□□□ -1.63
HERC4-213ENST00000506515 SP140LQ9H930 580 aa4.84□□□□□ -1.63
HERC4-213ENST00000506515 HPS4Q9NQG7 708 aa4.84□□□□□ -1.63
HERC4-213ENST00000506515 SPASTQ9UBP0 616 aa4.84□□□□□ -1.63
HERC4-213ENST00000506515 ZNF346Q9UL40 294 aaKnown RBP4.84□□□□□ -1.63
HERC4-213ENST00000506515 CCPG1Q9ULG6 757 aa4.84□□□□□ -1.63
HERC4-213ENST00000506515 OTOFQ9HC10 1997 aa4.84□□□□□ -1.64
HERC4-213ENST00000506515 ELP1O95163 1332 aa4.83□□□□□ -1.64
HERC4-213ENST00000506515 IGHV3OR16-10A0A075B7F0 116 aa4.83□□□□□ -1.64
HERC4-213ENST00000506515 K7EQG2 157 aa4.83□□□□□ -1.64
HERC4-213ENST00000506515 NTN3O00634 580 aaPredicted RBP4.83□□□□□ -1.64
HERC4-213ENST00000506515 SH2D1BO14796 132 aa4.83□□□□□ -1.64
HERC4-213ENST00000506515 CIAO1O76071 339 aa4.83□□□□□ -1.64
HERC4-213ENST00000506515 OR6B1O95007 311 aa4.83□□□□□ -1.64
HERC4-213ENST00000506515 SLC25A27O95847 323 aa4.83□□□□□ -1.64
HERC4-213ENST00000506515 PROS1P07225 676 aa4.83□□□□□ -1.64
HERC4-213ENST00000506515 HIST1H2AGP0C0S8 130 aaPredicted RBP4.83□□□□□ -1.64
HERC4-213ENST00000506515 ETS1P14921 441 aa4.83□□□□□ -1.64
HERC4-213ENST00000506515 GNSP15586 552 aa4.83□□□□□ -1.64
HERC4-213ENST00000506515 RIDAP52758 137 aaKnown RBP4.83□□□□□ -1.64
HERC4-213ENST00000506515 RPS4XP62701 263 aaKnown RBP4.83□□□□□ -1.64
HERC4-213ENST00000506515 KLF5Q13887 457 aaPredicted RBP4.83□□□□□ -1.64
HERC4-213ENST00000506515 BTG3Q14201 252 aaPredicted RBP4.83□□□□□ -1.64
HERC4-213ENST00000506515 CCDC92Q53HC0 331 aaPredicted RBP4.83□□□□□ -1.64
HERC4-213ENST00000506515 HERC4Q5GLZ8 1057 aaPredicted RBP4.83□□□□□ -1.64
HERC4-213ENST00000506515 CATSPER3Q86XQ3 398 aa4.83□□□□□ -1.64
HERC4-213ENST00000506515 HIST2H2ABQ8IUE6 130 aaPredicted RBP4.83□□□□□ -1.64
HERC4-213ENST00000506515 OR1K1Q8NGR3 316 aa4.83□□□□□ -1.64
HERC4-213ENST00000506515 HIST1H2ACQ93077 130 aa4.83□□□□□ -1.64
HERC4-213ENST00000506515 GLT1D1Q96MS3 346 aa4.83□□□□□ -1.64
HERC4-213ENST00000506515 TUBB1Q9H4B7 451 aa4.83□□□□□ -1.64
HERC4-213ENST00000506515 HOMER3Q9NSC5 361 aa4.83□□□□□ -1.64
HERC4-213ENST00000506515 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP4.83□□□□□ -1.64
HERC4-213ENST00000506515 NINJ2Q9NZG7 142 aa4.83□□□□□ -1.64
HERC4-213ENST00000506515 EIF3KQ9UBQ5 218 aaKnown RBP4.83□□□□□ -1.64
HERC4-213ENST00000506515 CTSZQ9UBR2 303 aa4.83□□□□□ -1.64
HERC4-213ENST00000506515 ENTPD4Q9Y227 616 aa4.83□□□□□ -1.64
HERC4-213ENST00000506515 PRSS21Q9Y6M0 314 aa4.83□□□□□ -1.64
HERC4-213ENST00000506515 DDX60LQ5H9U9 1706 aaKnown RBP4.83□□□□□ -1.64
HERC4-213ENST00000506515 GAKO14976 1311 aa4.82□□□□□ -1.64
HERC4-213ENST00000506515 TMEM89A2RUT3 159 aa4.82□□□□□ -1.64
HERC4-213ENST00000506515 CABYRO75952 493 aa4.82□□□□□ -1.64
HERC4-213ENST00000506515 MT-ATP6P00846 226 aa4.82□□□□□ -1.64
HERC4-213ENST00000506515 FCER2P06734 321 aa4.82□□□□□ -1.64
HERC4-213ENST00000506515 APRTP07741 180 aa4.82□□□□□ -1.64
HERC4-213ENST00000506515 OR9G9P0C7N8 305 aa4.82□□□□□ -1.64
HERC4-213ENST00000506515 KRT5P13647 590 aa4.82□□□□□ -1.64
HERC4-213ENST00000506515 RABIFP47224 123 aa4.82□□□□□ -1.64
HERC4-213ENST00000506515 CDKL1Q00532 357 aa4.82□□□□□ -1.64
HERC4-213ENST00000506515 MS4A2Q01362 244 aa4.82□□□□□ -1.64
HERC4-213ENST00000506515 IL1RL1Q01638 556 aa4.82□□□□□ -1.64
HERC4-213ENST00000506515 PAX8Q06710 450 aa4.82□□□□□ -1.64
HERC4-213ENST00000506515 ENPP2Q13822 863 aa4.82□□□□□ -1.64
HERC4-213ENST00000506515 SIX1Q15475 284 aaPredicted RBP4.82□□□□□ -1.64
HERC4-213ENST00000506515 RABL6Q3YEC7 729 aaPredicted RBP4.82□□□□□ -1.64
HERC4-213ENST00000506515 PAQR6Q6TCH4 344 aa4.82□□□□□ -1.64
HERC4-213ENST00000506515 ASRGL1Q7L266 308 aa4.82□□□□□ -1.64
HERC4-213ENST00000506515 NUFIP2Q7Z417 695 aaKnown RBP4.82□□□□□ -1.64
HERC4-213ENST00000506515 RPAINQ86UA6 219 aa4.82□□□□□ -1.64
HERC4-213ENST00000506515 ZNRF1Q8ND25 227 aa4.82□□□□□ -1.64
HERC4-213ENST00000506515 OR1B1Q8NGR6 318 aa4.82□□□□□ -1.64
HERC4-213ENST00000506515 RDH11Q8TC12 318 aa4.82□□□□□ -1.64
HERC4-213ENST00000506515 PHOSPHO2Q8TCD6 241 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms