RNA–Protein interactions for RNA: ENST00000505804.1

TOPBP1-204, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 472 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-204ENST00000505804 ART4Q93070 314 aa2.97□□□□□ -1.93
TOPBP1-204ENST00000505804 NCLNQ969V3 563 aa2.97□□□□□ -1.93
TOPBP1-204ENST00000505804 CNOT6LQ96LI5 555 aaKnown RBP2.97□□□□□ -1.93
TOPBP1-204ENST00000505804 CASD1Q96PB1 797 aa2.97□□□□□ -1.93
TOPBP1-204ENST00000505804 HCAR1Q9BXC0 346 aa2.97□□□□□ -1.93
TOPBP1-204ENST00000505804 IKZF5Q9H5V7 419 aa2.97□□□□□ -1.93
TOPBP1-204ENST00000505804 ZNF275Q9NSD4 429 aaPredicted RBP2.97□□□□□ -1.93
TOPBP1-204ENST00000505804 DUS2Q9NX74 493 aaKnown RBP2.97□□□□□ -1.93
TOPBP1-204ENST00000505804 KLRF1Q9NZS2 232 aa2.97□□□□□ -1.93
TOPBP1-204ENST00000505804 P2RX2Q9UBL9 471 aa2.97□□□□□ -1.93
TOPBP1-204ENST00000505804 B4GALT7Q9UBV7 327 aa2.97□□□□□ -1.93
TOPBP1-204ENST00000505804 ZNF490Q9ULM2 529 aaPredicted RBP2.97□□□□□ -1.93
TOPBP1-204ENST00000505804 PLEKHA6Q9Y2H5 1048 aa2.97□□□□□ -1.93
TOPBP1-204ENST00000505804 TRBV7-9A0A0J9YWB2 115 aa2.96□□□□□ -1.94
TOPBP1-204ENST00000505804 RNF103-CHMP3A0A140T963 221 aa2.96□□□□□ -1.94
TOPBP1-204ENST00000505804 SSX5O60225 188 aa2.96□□□□□ -1.94
TOPBP1-204ENST00000505804 NOL4O94818 638 aa2.96□□□□□ -1.94
TOPBP1-204ENST00000505804 KRTAP1-4P0C5Y4 121 aa2.96□□□□□ -1.94
TOPBP1-204ENST00000505804 CT45A10P0DMU9 189 aa2.96□□□□□ -1.94
TOPBP1-204ENST00000505804 GAP43P17677 238 aa2.96□□□□□ -1.94
TOPBP1-204ENST00000505804 RPA1P27694 616 aa2.96□□□□□ -1.94
TOPBP1-204ENST00000505804 PTPN6P29350 595 aa2.96□□□□□ -1.94
TOPBP1-204ENST00000505804 ACVR1BP36896 505 aa2.96□□□□□ -1.94
TOPBP1-204ENST00000505804 HTR5AP47898 357 aa2.96□□□□□ -1.94
TOPBP1-204ENST00000505804 MEOX2P50222 304 aa2.96□□□□□ -1.94
TOPBP1-204ENST00000505804 ERVPABLB-1P60509 514 aa2.96□□□□□ -1.94
TOPBP1-204ENST00000505804 RPS6P62753 249 aaKnown RBP2.96□□□□□ -1.94
TOPBP1-204ENST00000505804 IL9RQ01113 521 aa2.96□□□□□ -1.94
TOPBP1-204ENST00000505804 ZP4Q12836 540 aa2.96□□□□□ -1.94
TOPBP1-204ENST00000505804 SERTAD2Q14140 314 aa2.96□□□□□ -1.94
TOPBP1-204ENST00000505804 KARSQ15046 597 aaKnown RBP2.96□□□□□ -1.94
TOPBP1-204ENST00000505804 TGIF1Q15583 401 aa2.96□□□□□ -1.94
TOPBP1-204ENST00000505804 FHL5Q5TD97 284 aa2.96□□□□□ -1.94
TOPBP1-204ENST00000505804 LGSNQ5TDP6 509 aa2.96□□□□□ -1.94
TOPBP1-204ENST00000505804 OLFML2AQ68BL7 652 aa2.96□□□□□ -1.94
TOPBP1-204ENST00000505804 DMKNQ6E0U4 476 aaPredicted RBP2.96□□□□□ -1.94
TOPBP1-204ENST00000505804 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.96□□□□□ -1.94
TOPBP1-204ENST00000505804 LEG1Q6P5S2 330 aa2.96□□□□□ -1.94
TOPBP1-204ENST00000505804 Q7L0L9 218 aa2.96□□□□□ -1.94
TOPBP1-204ENST00000505804 KDM8Q8N371 416 aa2.96□□□□□ -1.94
TOPBP1-204ENST00000505804 RNF148Q8N7C7 305 aa2.96□□□□□ -1.94
TOPBP1-204ENST00000505804 DQX1Q8TE96 717 aaKnown RBP2.96□□□□□ -1.94
TOPBP1-204ENST00000505804 TADA1Q96BN2 335 aa2.96□□□□□ -1.94
TOPBP1-204ENST00000505804 VSIG2Q96IQ7 327 aa2.96□□□□□ -1.94
TOPBP1-204ENST00000505804 SAMD8Q96LT4 415 aa2.96□□□□□ -1.94
TOPBP1-204ENST00000505804 PAXXQ9BUH6 204 aa2.96□□□□□ -1.94
TOPBP1-204ENST00000505804 NMNAT2Q9BZQ4 307 aa2.96□□□□□ -1.94
TOPBP1-204ENST00000505804 MEPEQ9NQ76 525 aaPredicted RBP2.96□□□□□ -1.94
TOPBP1-204ENST00000505804 MIEF1Q9NQG6 463 aa2.96□□□□□ -1.94
TOPBP1-204ENST00000505804 SOHLH2Q9NX45 425 aa2.96□□□□□ -1.94
TOPBP1-204ENST00000505804 SLC2A6Q9UGQ3 507 aa2.96□□□□□ -1.94
TOPBP1-204ENST00000505804 CLEC4EQ9ULY5 219 aa2.96□□□□□ -1.94
TOPBP1-204ENST00000505804 METP08581 1390 aa2.96□□□□□ -1.94
TOPBP1-204ENST00000505804 GRIN2DO15399 1336 aa2.95□□□□□ -1.94
TOPBP1-204ENST00000505804 KLF18A0A0U1RQI7 1052 aa2.95□□□□□ -1.94
TOPBP1-204ENST00000505804 KRT87PA6NCN2 255 aa2.95□□□□□ -1.94
TOPBP1-204ENST00000505804 E9PMD0 336 aa2.95□□□□□ -1.94
TOPBP1-204ENST00000505804 SGK494L7N484 410 aa2.95□□□□□ -1.94
TOPBP1-204ENST00000505804 LGALS8O00214 317 aa2.95□□□□□ -1.94
TOPBP1-204ENST00000505804 SLC17A2O00624 439 aa2.95□□□□□ -1.94
TOPBP1-204ENST00000505804 IGFBP1P08833 259 aaPredicted RBP2.95□□□□□ -1.94
TOPBP1-204ENST00000505804 SDC1P18827 310 aa2.95□□□□□ -1.94
TOPBP1-204ENST00000505804 NDPQ00604 133 aa2.95□□□□□ -1.94
TOPBP1-204ENST00000505804 PUDPQ08623 228 aa2.95□□□□□ -1.94
TOPBP1-204ENST00000505804 UBE2V2Q15819 145 aa2.95□□□□□ -1.94
TOPBP1-204ENST00000505804 PKN2Q16513 984 aaKnown RBP2.95□□□□□ -1.94
TOPBP1-204ENST00000505804 CAMK4Q16566 473 aa2.95□□□□□ -1.94
TOPBP1-204ENST00000505804 QRICH1Q2TAL8 776 aa2.95□□□□□ -1.94
TOPBP1-204ENST00000505804 SLC22A10Q63ZE4 541 aa2.95□□□□□ -1.94
TOPBP1-204ENST00000505804 SLC39A4Q6P5W5 647 aa2.95□□□□□ -1.94
TOPBP1-204ENST00000505804 BTNL3Q6UXE8 466 aa2.95□□□□□ -1.94
TOPBP1-204ENST00000505804 ISLR2Q6UXK2 745 aa2.95□□□□□ -1.94
TOPBP1-204ENST00000505804 SH2D6Q7Z4S9 175 aa2.95□□□□□ -1.94
TOPBP1-204ENST00000505804 ZNF619Q8N2I2 560 aa2.95□□□□□ -1.94
TOPBP1-204ENST00000505804 ZNF525Q8N782 197 aa2.95□□□□□ -1.94
TOPBP1-204ENST00000505804 MRPL43Q8N983 215 aaKnown RBP2.95□□□□□ -1.94
TOPBP1-204ENST00000505804 MINDY2Q8NBR6 621 aa2.95□□□□□ -1.94
TOPBP1-204ENST00000505804 FAM71CQ8NEG0 241 aa2.95□□□□□ -1.94
TOPBP1-204ENST00000505804 OR8H1Q8NGG4 311 aa2.95□□□□□ -1.94
TOPBP1-204ENST00000505804 OR56B1Q8NGI3 324 aa2.95□□□□□ -1.94
TOPBP1-204ENST00000505804 CCDC26Q8TAB7 109 aa2.95□□□□□ -1.94
TOPBP1-204ENST00000505804 MCHR2Q969V1 340 aa2.95□□□□□ -1.94
TOPBP1-204ENST00000505804 SLC25A36Q96CQ1 311 aa2.95□□□□□ -1.94
TOPBP1-204ENST00000505804 TM2D1Q9BX74 207 aa2.95□□□□□ -1.94
TOPBP1-204ENST00000505804 ELOVL4Q9GZR5 314 aa2.95□□□□□ -1.94
TOPBP1-204ENST00000505804 RAB17Q9H0T7 212 aa2.95□□□□□ -1.94
TOPBP1-204ENST00000505804 OPN3Q9H1Y3 402 aaPredicted RBP2.95□□□□□ -1.94
TOPBP1-204ENST00000505804 ELOVL2Q9NXB9 296 aa2.95□□□□□ -1.94
TOPBP1-204ENST00000505804 DUSP12Q9UNI6 340 aa2.95□□□□□ -1.94
TOPBP1-204ENST00000505804 ABCC4O15439 1325 aa2.94□□□□□ -1.94
TOPBP1-204ENST00000505804 USP6P35125 1406 aa2.94□□□□□ -1.94
TOPBP1-204ENST00000505804 FAM220BPB1ANY3 271 aa2.94□□□□□ -1.94
TOPBP1-204ENST00000505804 KLLNB2CW77 178 aa2.94□□□□□ -1.94
TOPBP1-204ENST00000505804 H3BTX0 84 aa2.94□□□□□ -1.94
TOPBP1-204ENST00000505804 HAT1O14929 419 aa2.94□□□□□ -1.94
TOPBP1-204ENST00000505804 CASKO14936 926 aa2.94□□□□□ -1.94
TOPBP1-204ENST00000505804 ALOX15BO15296 676 aa2.94□□□□□ -1.94
TOPBP1-204ENST00000505804 NDUFA7O95182 113 aa2.94□□□□□ -1.94
TOPBP1-204ENST00000505804 PTBP3O95758 552 aaKnown RBP2.94□□□□□ -1.94
TOPBP1-204ENST00000505804 GSTT2P0CG29 244 aa2.94□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms