RNA–Protein interactions for RNA: ENST00000505553.5

TRAPPC13-208, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,410 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-208ENST00000505553 PHEXP78562 749 aa3.3□□□□□ -1.88
TRAPPC13-208ENST00000505553 ARL16Q0P5N6 197 aa3.3□□□□□ -1.88
TRAPPC13-208ENST00000505553 EIF2B1Q14232 305 aaKnown RBP3.3□□□□□ -1.88
TRAPPC13-208ENST00000505553 ECSCRQ19T08 205 aa3.3□□□□□ -1.88
TRAPPC13-208ENST00000505553 FFAR4Q5NUL3 377 aa3.3□□□□□ -1.88
TRAPPC13-208ENST00000505553 WLSQ5T9L3 541 aa3.3□□□□□ -1.88
TRAPPC13-208ENST00000505553 DOK6Q6PKX4 331 aa3.3□□□□□ -1.88
TRAPPC13-208ENST00000505553 BTNL3Q6UXE8 466 aa3.3□□□□□ -1.88
TRAPPC13-208ENST00000505553 USP43Q70EL4 1123 aa3.3□□□□□ -1.88
TRAPPC13-208ENST00000505553 MOB2Q70IA6 237 aa3.3□□□□□ -1.88
TRAPPC13-208ENST00000505553 ZNF771Q7L3S4 317 aaPredicted RBP3.3□□□□□ -1.88
TRAPPC13-208ENST00000505553 TRPM8Q7Z2W7 1104 aa3.3□□□□□ -1.88
TRAPPC13-208ENST00000505553 TSEN54Q7Z6J9 526 aaKnown RBP3.3□□□□□ -1.88
TRAPPC13-208ENST00000505553 ACOT1Q86TX2 421 aa3.3□□□□□ -1.88
TRAPPC13-208ENST00000505553 TTC5Q8N0Z6 440 aa3.3□□□□□ -1.88
TRAPPC13-208ENST00000505553 CLDN19Q8N6F1 224 aa3.3□□□□□ -1.88
TRAPPC13-208ENST00000505553 OR10G7Q8NGN6 311 aa3.3□□□□□ -1.88
TRAPPC13-208ENST00000505553 NANPQ8TBE9 248 aa3.3□□□□□ -1.88
TRAPPC13-208ENST00000505553 SPPL2AQ8TCT8 520 aa3.3□□□□□ -1.88
TRAPPC13-208ENST00000505553 PIGCQ92535 297 aa3.3□□□□□ -1.88
TRAPPC13-208ENST00000505553 TADA1Q96BN2 335 aa3.3□□□□□ -1.88
TRAPPC13-208ENST00000505553 SH3YL1Q96HL8 342 aaPredicted RBP3.3□□□□□ -1.88
TRAPPC13-208ENST00000505553 RPRD1AQ96P16 312 aaPredicted RBP3.3□□□□□ -1.88
TRAPPC13-208ENST00000505553 TGM7Q96PF1 710 aa3.3□□□□□ -1.88
TRAPPC13-208ENST00000505553 RIT2Q99578 217 aa3.3□□□□□ -1.88
TRAPPC13-208ENST00000505553 EPYCQ99645 322 aa3.3□□□□□ -1.88
TRAPPC13-208ENST00000505553 MMP28Q9H239 520 aa3.3□□□□□ -1.88
TRAPPC13-208ENST00000505553 METTL7AQ9H8H3 244 aa3.3□□□□□ -1.88
TRAPPC13-208ENST00000505553 MED20Q9H944 212 aa3.3□□□□□ -1.88
TRAPPC13-208ENST00000505553 B3GAT2Q9NPZ5 323 aa3.3□□□□□ -1.88
TRAPPC13-208ENST00000505553 UFSP2Q9NUQ7 469 aa3.3□□□□□ -1.88
TRAPPC13-208ENST00000505553 C2orf42Q9NWW7 574 aa3.3□□□□□ -1.88
TRAPPC13-208ENST00000505553 GNG12Q9UBI6 72 aa3.3□□□□□ -1.88
TRAPPC13-208ENST00000505553 SEC14L3Q9UDX4 400 aa3.3□□□□□ -1.88
TRAPPC13-208ENST00000505553 MAD1L1Q9Y6D9 718 aa3.3□□□□□ -1.88
TRAPPC13-208ENST00000505553 TTC21BQ7Z4L5 1316 aa3.3□□□□□ -1.88
TRAPPC13-208ENST00000505553 A0A1B0GUV1 79 aa3.29□□□□□ -1.88
TRAPPC13-208ENST00000505553 ZNF724A8MTY0 619 aa3.29□□□□□ -1.88
TRAPPC13-208ENST00000505553 NPIPA7E9PJI5 369 aa3.29□□□□□ -1.88
TRAPPC13-208ENST00000505553 H0YC42 278 aa3.29□□□□□ -1.88
TRAPPC13-208ENST00000505553 FBP2O00757 339 aa3.29□□□□□ -1.88
TRAPPC13-208ENST00000505553 RANBP6O60518 1105 aaKnown RBP3.29□□□□□ -1.88
TRAPPC13-208ENST00000505553 N4BP1O75113 896 aaKnown RBP3.29□□□□□ -1.88
TRAPPC13-208ENST00000505553 STX11O75558 287 aa3.29□□□□□ -1.88
TRAPPC13-208ENST00000505553 PDE5AO76074 875 aa3.29□□□□□ -1.88
TRAPPC13-208ENST00000505553 NDUFB10O96000 172 aa3.29□□□□□ -1.88
TRAPPC13-208ENST00000505553 AGTP01019 485 aa3.29□□□□□ -1.88
TRAPPC13-208ENST00000505553 HSMCR30P0CW71 290 aa3.29□□□□□ -1.88
TRAPPC13-208ENST00000505553 NPIPA8P0DM63 369 aa3.29□□□□□ -1.88
TRAPPC13-208ENST00000505553 PNMTP11086 282 aa3.29□□□□□ -1.88
TRAPPC13-208ENST00000505553 TBXA2RP21731 343 aa3.29□□□□□ -1.88
TRAPPC13-208ENST00000505553 GALP22466 123 aa3.29□□□□□ -1.88
TRAPPC13-208ENST00000505553 SAA4P35542 130 aa3.29□□□□□ -1.88
TRAPPC13-208ENST00000505553 MAP2K2P36507 400 aa3.29□□□□□ -1.88
TRAPPC13-208ENST00000505553 CDH4P55283 916 aa3.29□□□□□ -1.88
TRAPPC13-208ENST00000505553 RPS27AP62979 156 aaKnown RBP3.29□□□□□ -1.88
TRAPPC13-208ENST00000505553 NTHL1P78549 312 aa3.29□□□□□ -1.88
TRAPPC13-208ENST00000505553 CYCSP99999 105 aaKnown RBP3.29□□□□□ -1.88
TRAPPC13-208ENST00000505553 ATXN7L3Q14CW9 347 aaPredicted RBP3.29□□□□□ -1.88
TRAPPC13-208ENST00000505553 RBBP5Q15291 538 aaKnown RBP3.29□□□□□ -1.88
TRAPPC13-208ENST00000505553 MLF2Q15773 248 aaPredicted RBP3.29□□□□□ -1.88
TRAPPC13-208ENST00000505553 MTHFSDQ2M296 383 aaKnown RBP3.29□□□□□ -1.88
TRAPPC13-208ENST00000505553 HLA-BQ31612 363 aa3.29□□□□□ -1.88
TRAPPC13-208ENST00000505553 UNC50Q53HI1 259 aa3.29□□□□□ -1.88
TRAPPC13-208ENST00000505553 C10orf120Q5SQS8 335 aa3.29□□□□□ -1.88
TRAPPC13-208ENST00000505553 CELF3Q5SZQ8 465 aaKnown RBP3.29□□□□□ -1.88
TRAPPC13-208ENST00000505553 BHLHB9Q6PI77 547 aa3.29□□□□□ -1.88
TRAPPC13-208ENST00000505553 C3P1Q6ZMU1 363 aa3.29□□□□□ -1.88
TRAPPC13-208ENST00000505553 NLRP9Q7RTR0 991 aa3.29□□□□□ -1.88
TRAPPC13-208ENST00000505553 FAM228AQ86W67 206 aa3.29□□□□□ -1.88
TRAPPC13-208ENST00000505553 LRRC43Q8N309 656 aa3.29□□□□□ -1.88
TRAPPC13-208ENST00000505553 SPEM1Q8N4L4 309 aa3.29□□□□□ -1.88
TRAPPC13-208ENST00000505553 STXBP6Q8NFX7 210 aa3.29□□□□□ -1.88
TRAPPC13-208ENST00000505553 OR4F17Q8NGA8 305 aa3.29□□□□□ -1.88
TRAPPC13-208ENST00000505553 OR5D13Q8NGL4 314 aa3.29□□□□□ -1.88
TRAPPC13-208ENST00000505553 ZNF671Q8TAW3 534 aa3.29□□□□□ -1.88
TRAPPC13-208ENST00000505553 SLC2A14Q8TDB8 520 aa3.29□□□□□ -1.88
TRAPPC13-208ENST00000505553 MRGPRDQ8TDS7 321 aa3.29□□□□□ -1.88
TRAPPC13-208ENST00000505553 RPL3LQ92901 407 aaKnown RBP3.29□□□□□ -1.88
TRAPPC13-208ENST00000505553 ZNF524Q96C55 264 aa3.29□□□□□ -1.88
TRAPPC13-208ENST00000505553 OR4F4Q96R69 305 aa3.29□□□□□ -1.88
TRAPPC13-208ENST00000505553 ZNF300Q96RE9 604 aaPredicted RBP3.29□□□□□ -1.88
TRAPPC13-208ENST00000505553 TNFRSF13CQ96RJ3 184 aa3.29□□□□□ -1.88
TRAPPC13-208ENST00000505553 NPY6RQ99463 290 aa3.29□□□□□ -1.88
TRAPPC13-208ENST00000505553 OVOL2Q9BRP0 275 aa3.29□□□□□ -1.88
TRAPPC13-208ENST00000505553 TUBGCP2Q9BSJ2 902 aa3.29□□□□□ -1.88
TRAPPC13-208ENST00000505553 GPR61Q9BZJ8 451 aa3.29□□□□□ -1.88
TRAPPC13-208ENST00000505553 MAGT1Q9H0U3 335 aa3.29□□□□□ -1.88
TRAPPC13-208ENST00000505553 POLR3FQ9H1D9 316 aaPredicted RBP3.29□□□□□ -1.88
TRAPPC13-208ENST00000505553 SLC25A51Q9H1U9 297 aa3.29□□□□□ -1.88
TRAPPC13-208ENST00000505553 RHOJQ9H4E5 214 aa3.29□□□□□ -1.88
TRAPPC13-208ENST00000505553 NT5DC2Q9H857 520 aa3.29□□□□□ -1.88
TRAPPC13-208ENST00000505553 GPN2Q9H9Y4 310 aaPredicted RBP3.29□□□□□ -1.88
TRAPPC13-208ENST00000505553 ELL3Q9HB65 397 aaPredicted RBP3.29□□□□□ -1.88
TRAPPC13-208ENST00000505553 MRPL39Q9NYK5 338 aaKnown RBP3.29□□□□□ -1.88
TRAPPC13-208ENST00000505553 GALPQ9UBC7 116 aa3.29□□□□□ -1.88
TRAPPC13-208ENST00000505553 SEC14L4Q9UDX3 406 aa3.29□□□□□ -1.88
TRAPPC13-208ENST00000505553 CYTH4Q9UIA0 394 aa3.29□□□□□ -1.88
TRAPPC13-208ENST00000505553 LCMT1Q9UIC8 334 aa3.29□□□□□ -1.88
TRAPPC13-208ENST00000505553 NPIPA1Q9UND3 350 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms