RNA–Protein interactions for RNA: ENST00000505226.1

UBE3D-206, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 3,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-206ENST00000505226 SURF4O15260 269 aa11.15□□□□□ -0.62
UBE3D-206ENST00000505226 CXCL10P02778 98 aa11.15□□□□□ -0.62
UBE3D-206ENST00000505226 TBXA2RP21731 343 aa11.15□□□□□ -0.62
UBE3D-206ENST00000505226 SLC6A1P30531 599 aa11.15□□□□□ -0.62
UBE3D-206ENST00000505226 BTCP35070 178 aa11.15□□□□□ -0.62
UBE3D-206ENST00000505226 MAB21L1Q13394 359 aa11.15□□□□□ -0.62
UBE3D-206ENST00000505226 FCN2Q15485 313 aa11.15□□□□□ -0.62
UBE3D-206ENST00000505226 AMIGO1Q86WK6 493 aa11.15□□□□□ -0.62
UBE3D-206ENST00000505226 VRK2Q86Y07 508 aa11.15□□□□□ -0.62
UBE3D-206ENST00000505226 NKAIN4Q8IVV8 208 aa11.15□□□□□ -0.62
UBE3D-206ENST00000505226 SIRT6Q8N6T7 355 aa11.15□□□□□ -0.62
UBE3D-206ENST00000505226 HSD17B8Q92506 261 aa11.15□□□□□ -0.62
UBE3D-206ENST00000505226 MENTQ9BUN1 341 aa11.15□□□□□ -0.62
UBE3D-206ENST00000505226 MKRN2Q9H000 416 aaKnown RBP11.15□□□□□ -0.62
UBE3D-206ENST00000505226 SRRDQ9UH36 339 aa11.15□□□□□ -0.62
UBE3D-206ENST00000505226 CSNK1G3Q9Y6M4 447 aa11.15□□□□□ -0.62
UBE3D-206ENST00000505226 LOC105371267A0A1B0GV96 52 aa11.15□□□□□ -0.63
UBE3D-206ENST00000505226 A0A1W2PQ72 361 aa11.15□□□□□ -0.63
UBE3D-206ENST00000505226 FAM183AA6NL82 134 aa11.15□□□□□ -0.63
UBE3D-206ENST00000505226 SOCS6O14544 535 aa11.15□□□□□ -0.63
UBE3D-206ENST00000505226 PGRMC2O15173 223 aa11.15□□□□□ -0.63
UBE3D-206ENST00000505226 ARHGEF9O43307 516 aa11.15□□□□□ -0.63
UBE3D-206ENST00000505226 ORC5O43913 435 aa11.15□□□□□ -0.63
UBE3D-206ENST00000505226 LRG1P02750 347 aa11.15□□□□□ -0.63
UBE3D-206ENST00000505226 HMGN2P05204 90 aaKnown RBP11.15□□□□□ -0.63
UBE3D-206ENST00000505226 PLA1AQ53H76 456 aa11.15□□□□□ -0.63
UBE3D-206ENST00000505226 FAM27D1Q5T7N8 215 aa11.15□□□□□ -0.63
UBE3D-206ENST00000505226 NDUFAF5Q5TEU4 345 aa11.15□□□□□ -0.63
UBE3D-206ENST00000505226 KIAA0907Q7Z7F0 614 aaPredicted RBP11.15□□□□□ -0.63
UBE3D-206ENST00000505226 C17orf64Q86WR6 236 aa11.15□□□□□ -0.63
UBE3D-206ENST00000505226 FAM20CQ8IXL6 584 aa11.15□□□□□ -0.63
UBE3D-206ENST00000505226 NRSN1Q8IZ57 195 aa11.15□□□□□ -0.63
UBE3D-206ENST00000505226 OR2L2Q8NH16 312 aa11.15□□□□□ -0.63
UBE3D-206ENST00000505226 SUN5Q8TC36 379 aa11.15□□□□□ -0.63
UBE3D-206ENST00000505226 KLHL31Q9H511 634 aa11.15□□□□□ -0.63
UBE3D-206ENST00000505226 DDX31Q9H8H2 851 aaKnown RBP11.15□□□□□ -0.63
UBE3D-206ENST00000505226 ACSS1Q9NUB1 689 aaPredicted RBP11.15□□□□□ -0.63
UBE3D-206ENST00000505226 EXTL2Q9UBQ6 330 aa11.15□□□□□ -0.63
UBE3D-206ENST00000505226 WNT6Q9Y6F9 365 aa11.15□□□□□ -0.63
UBE3D-206ENST00000505226 A0A1W2PPV9 198 aa11.14□□□□□ -0.63
UBE3D-206ENST00000505226 CHP2O43745 196 aa11.14□□□□□ -0.63
UBE3D-206ENST00000505226 TSC22D2O75157 780 aa11.14□□□□□ -0.63
UBE3D-206ENST00000505226 HLA-DPB1P04440 258 aa11.14□□□□□ -0.63
UBE3D-206ENST00000505226 INHAP05111 366 aa11.14□□□□□ -0.63
UBE3D-206ENST00000505226 C8AP07357 584 aa11.14□□□□□ -0.63
UBE3D-206ENST00000505226 GSTM3P21266 225 aa11.14□□□□□ -0.63
UBE3D-206ENST00000505226 GPR1P46091 355 aa11.14□□□□□ -0.63
UBE3D-206ENST00000505226 NCBP2P52298 156 aaKnown RBP eCLIP11.14□□□□□ -0.63
UBE3D-206ENST00000505226 TSPAN31Q12999 210 aa11.14□□□□□ -0.63
UBE3D-206ENST00000505226 DSG2Q14126 1118 aa11.14□□□□□ -0.63
UBE3D-206ENST00000505226 IDNKQ5T6J7 187 aa11.14□□□□□ -0.63
UBE3D-206ENST00000505226 TIGD4Q8IY51 512 aa11.14□□□□□ -0.63
UBE3D-206ENST00000505226 OR11H4Q8NGC9 324 aa11.14□□□□□ -0.63
UBE3D-206ENST00000505226 AKAP1Q92667 903 aaKnown RBP eCLIP11.14□□□□□ -0.63
UBE3D-206ENST00000505226 ART5Q96L15 291 aa11.14□□□□□ -0.63
UBE3D-206ENST00000505226 SECISBP2Q96T21 854 aaKnown RBP11.14□□□□□ -0.63
UBE3D-206ENST00000505226 C17orf62Q9BQA9 187 aa11.14□□□□□ -0.63
UBE3D-206ENST00000505226 BCL2L10Q9HD36 194 aa11.14□□□□□ -0.63
UBE3D-206ENST00000505226 CBLCQ9ULV8 474 aa11.14□□□□□ -0.63
UBE3D-206ENST00000505226 NDUFS4O43181 175 aa11.14□□□□□ -0.63
UBE3D-206ENST00000505226 PIP5K1CO60331 668 aa11.14□□□□□ -0.63
UBE3D-206ENST00000505226 ZIC2O95409 532 aaPredicted RBP11.14□□□□□ -0.63
UBE3D-206ENST00000505226 MYCP01106 439 aaPredicted RBP11.14□□□□□ -0.63
UBE3D-206ENST00000505226 IGHA1P01876 353 aa11.14□□□□□ -0.63
UBE3D-206ENST00000505226 EIF4EP06730 217 aaKnown RBP11.14□□□□□ -0.63
UBE3D-206ENST00000505226 HOXB3P14651 431 aaPredicted RBP11.14□□□□□ -0.63
UBE3D-206ENST00000505226 ENPP1P22413 925 aa11.14□□□□□ -0.63
UBE3D-206ENST00000505226 GPR4P46093 362 aa11.14□□□□□ -0.63
UBE3D-206ENST00000505226 SRP9P49458 86 aaKnown RBP11.14□□□□□ -0.63
UBE3D-206ENST00000505226 TAS2R41P59536 307 aa11.14□□□□□ -0.63
UBE3D-206ENST00000505226 BCL2L15Q5TBC7 163 aa11.14□□□□□ -0.63
UBE3D-206ENST00000505226 RASSF6Q6ZTQ3 369 aa11.14□□□□□ -0.63
UBE3D-206ENST00000505226 OR11H7Q8NGC8 314 aa11.14□□□□□ -0.63
UBE3D-206ENST00000505226 SUN3Q8TAQ9 357 aa11.14□□□□□ -0.63
UBE3D-206ENST00000505226 GNPDA2Q8TDQ7 276 aa11.14□□□□□ -0.63
UBE3D-206ENST00000505226 SMG7Q92540 1137 aaKnown RBP11.14□□□□□ -0.63
UBE3D-206ENST00000505226 TTC9Q92623 222 aa11.14□□□□□ -0.63
UBE3D-206ENST00000505226 DIO2Q92813 273 aa11.14□□□□□ -0.63
UBE3D-206ENST00000505226 PPP1R16AQ96I34 528 aa11.14□□□□□ -0.63
UBE3D-206ENST00000505226 LINC00615Q96LM1 132 aaPredicted RBP11.14□□□□□ -0.63
UBE3D-206ENST00000505226 DPEP2Q9H4A9 486 aa11.14□□□□□ -0.63
UBE3D-206ENST00000505226 SLCO1C1Q9NYB5 712 aa11.14□□□□□ -0.63
UBE3D-206ENST00000505226 MAT2BQ9NZL9 334 aa11.14□□□□□ -0.63
UBE3D-206ENST00000505226 TEKT2Q9UIF3 430 aa11.14□□□□□ -0.63
UBE3D-206ENST00000505226 A0A0A6YYD5 115 aa11.13□□□□□ -0.63
UBE3D-206ENST00000505226 IGKV1-8A0A0C4DH67 115 aa11.13□□□□□ -0.63
UBE3D-206ENST00000505226 GSAPA4D1B5 854 aa11.13□□□□□ -0.63
UBE3D-206ENST00000505226 OR1F1O43749 312 aa11.13□□□□□ -0.63
UBE3D-206ENST00000505226 MOSPD3O75425 235 aa11.13□□□□□ -0.63
UBE3D-206ENST00000505226 SERPIND1P05546 499 aa11.13□□□□□ -0.63
UBE3D-206ENST00000505226 SYPP08247 313 aa11.13□□□□□ -0.63
UBE3D-206ENST00000505226 C8orf89P0DMQ9 161 aa11.13□□□□□ -0.63
UBE3D-206ENST00000505226 THBS2P35442 1172 aa11.13□□□□□ -0.63
UBE3D-206ENST00000505226 NNMTP40261 264 aa11.13□□□□□ -0.63
UBE3D-206ENST00000505226 OR10A3P58181 314 aa11.13□□□□□ -0.63
UBE3D-206ENST00000505226 SP3Q02447 781 aa11.13□□□□□ -0.63
UBE3D-206ENST00000505226 TEAD2Q15562 447 aa11.13□□□□□ -0.63
UBE3D-206ENST00000505226 ZNF322Q6U7Q0 402 aaPredicted RBP11.13□□□□□ -0.63
UBE3D-206ENST00000505226 NUDT13Q86X67 352 aa11.13□□□□□ -0.63
UBE3D-206ENST00000505226 TFGQ92734 400 aaPredicted RBP11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms