RNA–Protein interactions for RNA: ENST00000505005.5

NR1I3-220, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 985 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-220ENST00000505005 POLE3Q9NRF9 147 aa9.06□□□□□ -0.96
NR1I3-220ENST00000505005 AIG1Q9NVV5 245 aa9.06□□□□□ -0.96
NR1I3-220ENST00000505005 LUZP4Q9P127 313 aa9.06□□□□□ -0.96
NR1I3-220ENST00000505005 EXO1Q9UQ84 846 aaKnown RBP9.06□□□□□ -0.96
NR1I3-220ENST00000505005 CSAG2Q9Y5P2 127 aa9.06□□□□□ -0.96
NR1I3-220ENST00000505005 A0A1B0GVC2 190 aa9.05□□□□□ -0.96
NR1I3-220ENST00000505005 NPIPA5E9PKD4 350 aa9.05□□□□□ -0.96
NR1I3-220ENST00000505005 HRKO00198 91 aa9.05□□□□□ -0.96
NR1I3-220ENST00000505005 AQP7O14520 342 aa9.05□□□□□ -0.96
NR1I3-220ENST00000505005 SDHDO14521 159 aa9.05□□□□□ -0.96
NR1I3-220ENST00000505005 DIAPH2O60879 1101 aa9.05□□□□□ -0.96
NR1I3-220ENST00000505005 WDR1O75083 606 aa9.05□□□□□ -0.96
NR1I3-220ENST00000505005 IGHG3P01860 377 aa9.05□□□□□ -0.96
NR1I3-220ENST00000505005 PPIBP23284 216 aaKnown RBP9.05□□□□□ -0.96
NR1I3-220ENST00000505005 EPHA3P29320 983 aa9.05□□□□□ -0.96
NR1I3-220ENST00000505005 ARRB2P32121 409 aa9.05□□□□□ -0.96
NR1I3-220ENST00000505005 MAN2A2P49641 1150 aa9.05□□□□□ -0.96
NR1I3-220ENST00000505005 ATP4BP51164 291 aa9.05□□□□□ -0.96
NR1I3-220ENST00000505005 TDGF1P3P51864 188 aa9.05□□□□□ -0.96
NR1I3-220ENST00000505005 PRKAG1P54619 331 aa9.05□□□□□ -0.96
NR1I3-220ENST00000505005 EEFSECP57772 596 aaKnown RBP9.05□□□□□ -0.96
NR1I3-220ENST00000505005 GNGT1P63211 74 aa9.05□□□□□ -0.96
NR1I3-220ENST00000505005 PSG6Q00889 435 aa9.05□□□□□ -0.96
NR1I3-220ENST00000505005 LTB4RQ15722 352 aa9.05□□□□□ -0.96
NR1I3-220ENST00000505005 IGFBP7Q16270 282 aa9.05□□□□□ -0.96
NR1I3-220ENST00000505005 CPEB4Q17RY0 729 aaKnown RBP eCLIP9.05□□□□□ -0.96
NR1I3-220ENST00000505005 ZSWIM7Q19AV6 140 aa9.05□□□□□ -0.96
NR1I3-220ENST00000505005 GLYR1Q49A26 553 aaPredicted RBP9.05□□□□□ -0.96
NR1I3-220ENST00000505005 WLSQ5T9L3 541 aa9.05□□□□□ -0.96
NR1I3-220ENST00000505005 TIGD3Q6B0B8 471 aa9.05□□□□□ -0.96
NR1I3-220ENST00000505005 CDC73Q6P1J9 531 aa9.05□□□□□ -0.96
NR1I3-220ENST00000505005 AAGABQ6PD74 315 aa9.05□□□□□ -0.96
NR1I3-220ENST00000505005 XKRXQ6PP77 449 aa9.05□□□□□ -0.96
NR1I3-220ENST00000505005 ENPP6Q6UWR7 440 aa9.05□□□□□ -0.96
NR1I3-220ENST00000505005 LYPD8Q6UX82 237 aa9.05□□□□□ -0.96
NR1I3-220ENST00000505005 Q6ZPB1 254 aaPredicted RBP9.05□□□□□ -0.96
NR1I3-220ENST00000505005 SZRD1Q7Z422 152 aa9.05□□□□□ -0.96
NR1I3-220ENST00000505005 SHISA5Q8N114 240 aa9.05□□□□□ -0.96
NR1I3-220ENST00000505005 CPSF7Q8N684 471 aaKnown RBP9.05□□□□□ -0.96
NR1I3-220ENST00000505005 COX18Q8N8Q8 333 aa9.05□□□□□ -0.96
NR1I3-220ENST00000505005 TSPEARQ8WU66 669 aa9.05□□□□□ -0.96
NR1I3-220ENST00000505005 PHF10Q8WUB8 498 aaKnown RBP9.05□□□□□ -0.96
NR1I3-220ENST00000505005 UCN3Q969E3 161 aa9.05□□□□□ -0.96
NR1I3-220ENST00000505005 TMBIM1Q969X1 311 aa9.05□□□□□ -0.96
NR1I3-220ENST00000505005 BTBD2Q9BX70 525 aa9.05□□□□□ -0.96
NR1I3-220ENST00000505005 OSBPL11Q9BXB4 747 aa9.05□□□□□ -0.96
NR1I3-220ENST00000505005 TTTY12Q9BZ98 90 aa9.05□□□□□ -0.96
NR1I3-220ENST00000505005 TBL1XR1Q9BZK7 514 aa9.05□□□□□ -0.96
NR1I3-220ENST00000505005 TP63Q9H3D4 680 aaPredicted RBP9.05□□□□□ -0.96
NR1I3-220ENST00000505005 EXO5Q9H790 373 aa9.05□□□□□ -0.96
NR1I3-220ENST00000505005 LIN28AQ9H9Z2 209 aaKnown RBP9.05□□□□□ -0.96
NR1I3-220ENST00000505005 CACYBPQ9HB71 228 aaKnown RBP9.05□□□□□ -0.96
NR1I3-220ENST00000505005 SDR39U1Q9NRG7 319 aaPredicted RBP9.05□□□□□ -0.96
NR1I3-220ENST00000505005 UBQLN4Q9NRR5 601 aa9.05□□□□□ -0.96
NR1I3-220ENST00000505005 PLSCR2Q9NRY7 297 aa9.05□□□□□ -0.96
NR1I3-220ENST00000505005 CNOT11Q9UKZ1 510 aaKnown RBP9.05□□□□□ -0.96
NR1I3-220ENST00000505005 NPIPA1Q9UND3 350 aa9.05□□□□□ -0.96
NR1I3-220ENST00000505005 CORO2BQ9UQ03 480 aa9.05□□□□□ -0.96
NR1I3-220ENST00000505005 LIPT1Q9Y234 373 aa9.05□□□□□ -0.96
NR1I3-220ENST00000505005 SNX8Q9Y5X2 465 aa9.05□□□□□ -0.96
NR1I3-220ENST00000505005 PTGDR2Q9Y5Y4 395 aa9.05□□□□□ -0.96
NR1I3-220ENST00000505005 BOD1L1Q8NFC6 3051 aa9.05□□□□□ -0.96
NR1I3-220ENST00000505005 ZGRF1Q86YA3 2104 aa9.04□□□□□ -0.96
NR1I3-220ENST00000505005 TRGV5A0A0B4J1U4 118 aa9.04□□□□□ -0.96
NR1I3-220ENST00000505005 A0A1W2PQD3 144 aa9.04□□□□□ -0.96
NR1I3-220ENST00000505005 PRAMEF25A6NGN4 478 aa9.04□□□□□ -0.96
NR1I3-220ENST00000505005 AHRRA9YTQ3 701 aa9.04□□□□□ -0.96
NR1I3-220ENST00000505005 E9PLN8 166 aa9.04□□□□□ -0.96
NR1I3-220ENST00000505005 SCDO00767 359 aa9.04□□□□□ -0.96
NR1I3-220ENST00000505005 MAN1A2O60476 641 aa9.04□□□□□ -0.96
NR1I3-220ENST00000505005 TSPAN2O60636 221 aa9.04□□□□□ -0.96
NR1I3-220ENST00000505005 SLC19A2O60779 497 aa9.04□□□□□ -0.96
NR1I3-220ENST00000505005 TRIM3O75382 744 aaPredicted RBP9.04□□□□□ -0.96
NR1I3-220ENST00000505005 GLSO94925 669 aaPredicted RBP9.04□□□□□ -0.96
NR1I3-220ENST00000505005 ANP32DO95626 131 aa9.04□□□□□ -0.96
NR1I3-220ENST00000505005 FAM107AO95990 144 aa9.04□□□□□ -0.96
NR1I3-220ENST00000505005 ACTL6AO96019 429 aa9.04□□□□□ -0.96
NR1I3-220ENST00000505005 PGRP06401 933 aa9.04□□□□□ -0.96
NR1I3-220ENST00000505005 CCL3P10147 92 aa9.04□□□□□ -0.96
NR1I3-220ENST00000505005 LAMP1P11279 417 aa9.04□□□□□ -0.96
NR1I3-220ENST00000505005 GNLYP22749 145 aa9.04□□□□□ -0.96
NR1I3-220ENST00000505005 ADSLP30566 484 aaPredicted RBP9.04□□□□□ -0.96
NR1I3-220ENST00000505005 GABRA3P34903 492 aa9.04□□□□□ -0.96
NR1I3-220ENST00000505005 TRPC1P48995 793 aa9.04□□□□□ -0.96
NR1I3-220ENST00000505005 KCNK10P57789 538 aa9.04□□□□□ -0.96
NR1I3-220ENST00000505005 POU6F2P78424 691 aaPredicted RBP9.04□□□□□ -0.96
NR1I3-220ENST00000505005 MFSD12Q6NUT3 480 aa9.04□□□□□ -0.96
NR1I3-220ENST00000505005 ZNF551Q7Z340 670 aaPredicted RBP9.04□□□□□ -0.96
NR1I3-220ENST00000505005 ZNF227Q86WZ6 799 aa9.04□□□□□ -0.96
NR1I3-220ENST00000505005 PLCZ1Q86YW0 608 aa9.04□□□□□ -0.96
NR1I3-220ENST00000505005 SIAH3Q8IW03 269 aa9.04□□□□□ -0.96
NR1I3-220ENST00000505005 MMP21Q8N119 569 aa9.04□□□□□ -0.96
NR1I3-220ENST00000505005 OR7A2PQ8NGA2 310 aa9.04□□□□□ -0.96
NR1I3-220ENST00000505005 OR10G3Q8NGC4 313 aa9.04□□□□□ -0.96
NR1I3-220ENST00000505005 CLHC1Q8NHS4 586 aa9.04□□□□□ -0.96
NR1I3-220ENST00000505005 SSC4DQ8WTU2 575 aa9.04□□□□□ -0.96
NR1I3-220ENST00000505005 SLC9A6Q92581 669 aa9.04□□□□□ -0.96
NR1I3-220ENST00000505005 FAM120BQ96EK7 910 aaKnown RBP9.04□□□□□ -0.96
NR1I3-220ENST00000505005 LRRC46Q96FV0 321 aa9.04□□□□□ -0.96
NR1I3-220ENST00000505005 CHMP6Q96FZ7 201 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms