RNA–Protein interactions for RNA: ENST00000504489.3

PDLIM5-208, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4 BASIC

Gene PDLIM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-208ENST00000504489 C5orf34Q96MH7 638 aa10.96□□□□□ -0.65
PDLIM5-208ENST00000504489 CCT8L2Q96SF2 557 aa10.96□□□□□ -0.65
PDLIM5-208ENST00000504489 SLC35A5Q9BS91 424 aa10.96□□□□□ -0.65
PDLIM5-208ENST00000504489 NMUR2Q9GZQ4 415 aa10.96□□□□□ -0.65
PDLIM5-208ENST00000504489 Q9N2J8 555 aa10.96□□□□□ -0.65
PDLIM5-208ENST00000504489 SH2D2AQ9NP31 389 aa10.96□□□□□ -0.65
PDLIM5-208ENST00000504489 TIMMDC1Q9NPL8 285 aa10.96□□□□□ -0.65
PDLIM5-208ENST00000504489 DUSP22Q9NRW4 184 aa10.96□□□□□ -0.65
PDLIM5-208ENST00000504489 MAP10Q9P2G4 905 aa10.96□□□□□ -0.65
PDLIM5-208ENST00000504489 FAF1Q9UNN5 650 aaPredicted RBP10.96□□□□□ -0.65
PDLIM5-208ENST00000504489 OR10H1Q9Y4A9 318 aa10.96□□□□□ -0.65
PDLIM5-208ENST00000504489 RP1L1Q8IWN7 2480 aaPredicted RBP10.96□□□□□ -0.66
PDLIM5-208ENST00000504489 OR6C70A6NIJ9 312 aa10.95□□□□□ -0.66
PDLIM5-208ENST00000504489 DUXAA6NLW8 204 aa10.95□□□□□ -0.66
PDLIM5-208ENST00000504489 TP53I11O14683 189 aa10.95□□□□□ -0.66
PDLIM5-208ENST00000504489 NME2P1O60361 137 aa10.95□□□□□ -0.66
PDLIM5-208ENST00000504489 REM1O75628 298 aa10.95□□□□□ -0.66
PDLIM5-208ENST00000504489 SORBS2O94875 1100 aaKnown RBP10.95□□□□□ -0.66
PDLIM5-208ENST00000504489 ALOX5P09917 674 aa10.95□□□□□ -0.66
PDLIM5-208ENST00000504489 HOXB9P17482 250 aaPredicted RBP10.95□□□□□ -0.66
PDLIM5-208ENST00000504489 MATN1P21941 496 aa10.95□□□□□ -0.66
PDLIM5-208ENST00000504489 NME2P22392 152 aa10.95□□□□□ -0.66
PDLIM5-208ENST00000504489 CHI3L1P36222 383 aaPredicted RBP10.95□□□□□ -0.66
PDLIM5-208ENST00000504489 PIGAP37287 484 aa10.95□□□□□ -0.66
PDLIM5-208ENST00000504489 MAGEA8P43361 318 aa10.95□□□□□ -0.66
PDLIM5-208ENST00000504489 PNLIPRP2P54317 469 aa10.95□□□□□ -0.66
PDLIM5-208ENST00000504489 TXNL4AP83876 142 aaKnown RBP10.95□□□□□ -0.66
PDLIM5-208ENST00000504489 PLCXD2Q0VAA5 305 aa10.95□□□□□ -0.66
PDLIM5-208ENST00000504489 UBAP2LQ14157 1087 aaKnown RBP10.95□□□□□ -0.66
PDLIM5-208ENST00000504489 ESPL1Q14674 2120 aa10.95□□□□□ -0.66
PDLIM5-208ENST00000504489 DUSP5Q16690 384 aa10.95□□□□□ -0.66
PDLIM5-208ENST00000504489 PAGE3Q5JUK9 113 aa10.95□□□□□ -0.66
PDLIM5-208ENST00000504489 C6orf10Q5SRN2 563 aa10.95□□□□□ -0.66
PDLIM5-208ENST00000504489 LRIF1Q5T3J3 769 aa10.95□□□□□ -0.66
PDLIM5-208ENST00000504489 SLC22A10Q63ZE4 541 aa10.95□□□□□ -0.66
PDLIM5-208ENST00000504489 SLC2A7Q6PXP3 512 aa10.95□□□□□ -0.66
PDLIM5-208ENST00000504489 CLEC4FQ8N1N0 589 aa10.95□□□□□ -0.66
PDLIM5-208ENST00000504489 PSD4Q8NDX1 1056 aa10.95□□□□□ -0.66
PDLIM5-208ENST00000504489 FAM13CQ8NE31 585 aa10.95□□□□□ -0.66
PDLIM5-208ENST00000504489 OR10G3Q8NGC4 313 aa10.95□□□□□ -0.66
PDLIM5-208ENST00000504489 OR4N2Q8NGD1 307 aa10.95□□□□□ -0.66
PDLIM5-208ENST00000504489 FAM110BQ8TC76 370 aa10.95□□□□□ -0.66
PDLIM5-208ENST00000504489 GPR151Q8TDV0 419 aa10.95□□□□□ -0.66
PDLIM5-208ENST00000504489 ADAMTS15Q8TE58 950 aa10.95□□□□□ -0.66
PDLIM5-208ENST00000504489 PAQR8Q8TEZ7 354 aa10.95□□□□□ -0.66
PDLIM5-208ENST00000504489 TMBIM1Q969X1 311 aa10.95□□□□□ -0.66
PDLIM5-208ENST00000504489 SLC35A4Q96G79 324 aa10.95□□□□□ -0.66
PDLIM5-208ENST00000504489 SLC35G5Q96KT7 338 aa10.95□□□□□ -0.66
PDLIM5-208ENST00000504489 SECISBP2Q96T21 854 aaKnown RBP10.95□□□□□ -0.66
PDLIM5-208ENST00000504489 YIPF4Q9BSR8 244 aa10.95□□□□□ -0.66
PDLIM5-208ENST00000504489 BTBD2Q9BX70 525 aa10.95□□□□□ -0.66
PDLIM5-208ENST00000504489 PAIP1Q9H074 479 aaKnown RBP10.95□□□□□ -0.66
PDLIM5-208ENST00000504489 PIGUQ9H490 435 aa10.95□□□□□ -0.66
PDLIM5-208ENST00000504489 SLC6A13Q9NSD5 602 aa10.95□□□□□ -0.66
PDLIM5-208ENST00000504489 CNIH4Q9P003 139 aa10.95□□□□□ -0.66
PDLIM5-208ENST00000504489 LEF1Q9UJU2 399 aaPredicted RBP10.95□□□□□ -0.66
PDLIM5-208ENST00000504489 MRTO4Q9UKD2 239 aaKnown RBP10.95□□□□□ -0.66
PDLIM5-208ENST00000504489 CBLCQ9ULV8 474 aa10.95□□□□□ -0.66
PDLIM5-208ENST00000504489 ARL2BPQ9Y2Y0 163 aa10.95□□□□□ -0.66
PDLIM5-208ENST00000504489 KLF13Q9Y2Y9 288 aaPredicted RBP10.95□□□□□ -0.66
PDLIM5-208ENST00000504489 NDUFAF1Q9Y375 327 aa10.95□□□□□ -0.66
PDLIM5-208ENST00000504489 CHCHD2Q9Y6H1 151 aaPredicted RBP10.95□□□□□ -0.66
PDLIM5-208ENST00000504489 GXYLT2A0PJZ3 443 aa10.94□□□□□ -0.66
PDLIM5-208ENST00000504489 ANKRD33BA6NCL7 494 aa10.94□□□□□ -0.66
PDLIM5-208ENST00000504489 EIF4E1BA6NMX2 242 aaKnown RBP10.94□□□□□ -0.66
PDLIM5-208ENST00000504489 KCNH1O95259 989 aa10.94□□□□□ -0.66
PDLIM5-208ENST00000504489 ANP32DO95626 131 aa10.94□□□□□ -0.66
PDLIM5-208ENST00000504489 KRT75O95678 551 aa10.94□□□□□ -0.66
PDLIM5-208ENST00000504489 IL33O95760 270 aa10.94□□□□□ -0.66
PDLIM5-208ENST00000504489 FAM107AO95990 144 aa10.94□□□□□ -0.66
PDLIM5-208ENST00000504489 P04436 131 aa10.94□□□□□ -0.66
PDLIM5-208ENST00000504489 GSNP06396 782 aa10.94□□□□□ -0.66
PDLIM5-208ENST00000504489 CCL3P10147 92 aa10.94□□□□□ -0.66
PDLIM5-208ENST00000504489 KRT20P35900 424 aa10.94□□□□□ -0.66
PDLIM5-208ENST00000504489 FBXW4P57775 412 aa10.94□□□□□ -0.66
PDLIM5-208ENST00000504489 RPP38P78345 283 aaKnown RBP10.94□□□□□ -0.66
PDLIM5-208ENST00000504489 MRPS22P82650 360 aaKnown RBP10.94□□□□□ -0.66
PDLIM5-208ENST00000504489 PRR20EP86478 221 aa10.94□□□□□ -0.66
PDLIM5-208ENST00000504489 PRR20CP86479 221 aa10.94□□□□□ -0.66
PDLIM5-208ENST00000504489 PRR20DP86480 221 aa10.94□□□□□ -0.66
PDLIM5-208ENST00000504489 PRR20BP86481 221 aa10.94□□□□□ -0.66
PDLIM5-208ENST00000504489 PRR20AP86496 221 aa10.94□□□□□ -0.66
PDLIM5-208ENST00000504489 EFR3AQ14156 821 aa10.94□□□□□ -0.66
PDLIM5-208ENST00000504489 MAPRE2Q15555 327 aa10.94□□□□□ -0.66
PDLIM5-208ENST00000504489 INAQ16352 499 aa10.94□□□□□ -0.66
PDLIM5-208ENST00000504489 DECR1Q16698 335 aa10.94□□□□□ -0.66
PDLIM5-208ENST00000504489 TMEM81Q6P7N7 255 aa10.94□□□□□ -0.66
PDLIM5-208ENST00000504489 GALNTL5Q7Z4T8 443 aa10.94□□□□□ -0.66
PDLIM5-208ENST00000504489 MTDHQ86UE4 582 aaKnown RBP10.94□□□□□ -0.66
PDLIM5-208ENST00000504489 FBXW8Q8N3Y1 598 aa10.94□□□□□ -0.66
PDLIM5-208ENST00000504489 ZNF843Q8N446 348 aa10.94□□□□□ -0.66
PDLIM5-208ENST00000504489 DPP10Q8N608 796 aa10.94□□□□□ -0.66
PDLIM5-208ENST00000504489 BCORP1Q8N888 145 aa10.94□□□□□ -0.66
PDLIM5-208ENST00000504489 COX18Q8N8Q8 333 aa10.94□□□□□ -0.66
PDLIM5-208ENST00000504489 DNAJB8Q8NHS0 232 aa10.94□□□□□ -0.66
PDLIM5-208ENST00000504489 FBXO30Q8TB52 745 aa10.94□□□□□ -0.66
PDLIM5-208ENST00000504489 SPPL2AQ8TCT8 520 aa10.94□□□□□ -0.66
PDLIM5-208ENST00000504489 ZFP90Q8TF47 636 aa10.94□□□□□ -0.66
PDLIM5-208ENST00000504489 PIK3R3Q92569 461 aa10.94□□□□□ -0.66
PDLIM5-208ENST00000504489 JADE3Q92613 823 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms