RNA–Protein interactions for RNA: ENST00000504430.5

NIPBL-204, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 2

Gene NIPBL, Length 3,455 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-204ENST00000504430 FCRL5Q96RD9 977 aa4.77□□□□□ -1.65
NIPBL-204ENST00000504430 AIFM2Q9BRQ8 373 aa4.77□□□□□ -1.65
NIPBL-204ENST00000504430 TRIM36Q9NQ86 728 aa4.77□□□□□ -1.65
NIPBL-204ENST00000504430 C12orf4Q9NQ89 552 aa4.77□□□□□ -1.65
NIPBL-204ENST00000504430 MRPL39Q9NYK5 338 aaKnown RBP4.77□□□□□ -1.65
NIPBL-204ENST00000504430 LRP5LA4QPB2 252 aa4.76□□□□□ -1.65
NIPBL-204ENST00000504430 E9PMD0 336 aa4.76□□□□□ -1.65
NIPBL-204ENST00000504430 HSPA12AO43301 675 aa4.76□□□□□ -1.65
NIPBL-204ENST00000504430 SNRPAP09012 282 aaKnown RBP4.76□□□□□ -1.65
NIPBL-204ENST00000504430 CTRB1P17538 263 aa4.76□□□□□ -1.65
NIPBL-204ENST00000504430 ACVR1BP36896 505 aa4.76□□□□□ -1.65
NIPBL-204ENST00000504430 SOX2P48431 317 aa4.76□□□□□ -1.65
NIPBL-204ENST00000504430 NAPAP54920 295 aa4.76□□□□□ -1.65
NIPBL-204ENST00000504430 RPL10AP62906 217 aaKnown RBP4.76□□□□□ -1.65
NIPBL-204ENST00000504430 DHODHQ02127 395 aa4.76□□□□□ -1.65
NIPBL-204ENST00000504430 ORC2Q13416 577 aaPredicted RBP4.76□□□□□ -1.65
NIPBL-204ENST00000504430 CEP85LQ5SZL2 805 aa4.76□□□□□ -1.65
NIPBL-204ENST00000504430 CTRB2Q6GPI1 263 aa4.76□□□□□ -1.65
NIPBL-204ENST00000504430 NCAPH2Q6IBW4 605 aa4.76□□□□□ -1.65
NIPBL-204ENST00000504430 FAM151BQ6UXP7 276 aa4.76□□□□□ -1.65
NIPBL-204ENST00000504430 KLHDC1Q8N7A1 406 aa4.76□□□□□ -1.65
NIPBL-204ENST00000504430 NPEPL1Q8NDH3 523 aa4.76□□□□□ -1.65
NIPBL-204ENST00000504430 OR2L8Q8NGY9 312 aa4.76□□□□□ -1.65
NIPBL-204ENST00000504430 SPRYD4Q8WW59 207 aaPredicted RBP4.76□□□□□ -1.65
NIPBL-204ENST00000504430 ASB10Q8WXI3 467 aa4.76□□□□□ -1.65
NIPBL-204ENST00000504430 SNF8Q96H20 258 aa4.76□□□□□ -1.65
NIPBL-204ENST00000504430 RANBP9Q96S59 729 aa4.76□□□□□ -1.65
NIPBL-204ENST00000504430 MAP1LC3CQ9BXW4 147 aa4.76□□□□□ -1.65
NIPBL-204ENST00000504430 PRRG4Q9BZD6 226 aa4.76□□□□□ -1.65
NIPBL-204ENST00000504430 LRRN3Q9H3W5 708 aa4.76□□□□□ -1.65
NIPBL-204ENST00000504430 C1orf123Q9NWV4 160 aa4.76□□□□□ -1.65
NIPBL-204ENST00000504430 C2orf42Q9NWW7 574 aa4.76□□□□□ -1.65
NIPBL-204ENST00000504430 LHX3Q9UBR4 397 aa4.76□□□□□ -1.65
NIPBL-204ENST00000504430 GSTK1Q9Y2Q3 226 aa4.76□□□□□ -1.65
NIPBL-204ENST00000504430 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.76□□□□□ -1.65
NIPBL-204ENST00000504430 A0A1W2PPV9 198 aa4.76□□□□□ -1.65
NIPBL-204ENST00000504430 SMCO3A2RU48 225 aa4.76□□□□□ -1.65
NIPBL-204ENST00000504430 NPEPPSL1A6NEC2 478 aa4.76□□□□□ -1.65
NIPBL-204ENST00000504430 EIF2S2P20042 333 aaKnown RBP4.76□□□□□ -1.65
NIPBL-204ENST00000504430 CAPZBP47756 277 aa4.76□□□□□ -1.65
NIPBL-204ENST00000504430 HTR5AP47898 357 aa4.76□□□□□ -1.65
NIPBL-204ENST00000504430 PKNOX1P55347 436 aa4.76□□□□□ -1.65
NIPBL-204ENST00000504430 PLP1P60201 277 aa4.76□□□□□ -1.65
NIPBL-204ENST00000504430 CXCR4P61073 352 aa4.76□□□□□ -1.65
NIPBL-204ENST00000504430 DUOXA1Q1HG43 343 aa4.76□□□□□ -1.65
NIPBL-204ENST00000504430 SEL1L2Q5TEA6 688 aa4.76□□□□□ -1.65
NIPBL-204ENST00000504430 SLC25A47Q6Q0C1 308 aa4.76□□□□□ -1.65
NIPBL-204ENST00000504430 MPZL3Q6UWV2 235 aa4.76□□□□□ -1.65
NIPBL-204ENST00000504430 SNX20Q7Z614 316 aa4.76□□□□□ -1.65
NIPBL-204ENST00000504430 MB21D2Q8IYB1 491 aaPredicted RBP4.76□□□□□ -1.65
NIPBL-204ENST00000504430 TRAM1L1Q8N609 369 aa4.76□□□□□ -1.65
NIPBL-204ENST00000504430 BLOC1S5Q8TDH9 187 aa4.76□□□□□ -1.65
NIPBL-204ENST00000504430 OMA1Q96E52 524 aa4.76□□□□□ -1.65
NIPBL-204ENST00000504430 FRG2BQ96QU4 278 aa4.76□□□□□ -1.65
NIPBL-204ENST00000504430 OR2B2Q9GZK3 357 aa4.76□□□□□ -1.65
NIPBL-204ENST00000504430 CXXC4Q9H2H0 198 aa4.76□□□□□ -1.65
NIPBL-204ENST00000504430 C10orf88Q9H8K7 445 aa4.76□□□□□ -1.65
NIPBL-204ENST00000504430 DCAF13Q9NV06 445 aaKnown RBP4.76□□□□□ -1.65
NIPBL-204ENST00000504430 MYO6Q9UM54 1294 aa4.76□□□□□ -1.65
NIPBL-204ENST00000504430 ABCG2Q9UNQ0 655 aa4.76□□□□□ -1.65
NIPBL-204ENST00000504430 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP4.76□□□□□ -1.653e-7■■□□□ 13.7
NIPBL-204ENST00000504430 EMSYQ7Z589 1322 aa4.76□□□□□ -1.65
NIPBL-204ENST00000504430 A0A1W2PPE3 182 aa4.76□□□□□ -1.65
NIPBL-204ENST00000504430 MKRN2OSH3BPM6 223 aa4.76□□□□□ -1.65
NIPBL-204ENST00000504430 M0R296 226 aa4.76□□□□□ -1.65
NIPBL-204ENST00000504430 MLNRO43193 412 aa4.76□□□□□ -1.65
NIPBL-204ENST00000504430 PRKRAO75569 313 aaKnown RBP4.76□□□□□ -1.65
NIPBL-204ENST00000504430 WISP2O76076 250 aa4.76□□□□□ -1.65
NIPBL-204ENST00000504430 BAG3O95817 575 aa4.76□□□□□ -1.65
NIPBL-204ENST00000504430 DBTP11182 482 aaKnown RBP4.76□□□□□ -1.65
NIPBL-204ENST00000504430 ACADSP16219 412 aa4.76□□□□□ -1.65
NIPBL-204ENST00000504430 COILP38432 576 aaPredicted RBP4.76□□□□□ -1.65
NIPBL-204ENST00000504430 APOBEC1P41238 236 aaKnown RBP4.76□□□□□ -1.65
NIPBL-204ENST00000504430 BRCC3P46736 316 aa4.76□□□□□ -1.65
NIPBL-204ENST00000504430 MBTD1Q05BQ5 628 aa4.76□□□□□ -1.65
NIPBL-204ENST00000504430 CDC20Q12834 499 aa4.76□□□□□ -1.65
NIPBL-204ENST00000504430 ALX1Q15699 326 aa4.76□□□□□ -1.65
NIPBL-204ENST00000504430 FFAR4Q5NUL3 377 aa4.76□□□□□ -1.65
NIPBL-204ENST00000504430 LRRC8BQ6P9F7 803 aa4.76□□□□□ -1.65
NIPBL-204ENST00000504430 ARCQ7LC44 396 aa4.76□□□□□ -1.65
NIPBL-204ENST00000504430 CPEB2Q7Z5Q1 589 aaKnown RBP4.76□□□□□ -1.65
NIPBL-204ENST00000504430 ZFP82Q8N141 532 aa4.76□□□□□ -1.65
NIPBL-204ENST00000504430 GIPC3Q8TF64 312 aa4.76□□□□□ -1.65
NIPBL-204ENST00000504430 TFGQ92734 400 aaPredicted RBP4.76□□□□□ -1.65
NIPBL-204ENST00000504430 SNAPC3Q92966 411 aa4.76□□□□□ -1.65
NIPBL-204ENST00000504430 OTUB2Q96DC9 234 aa4.76□□□□□ -1.65
NIPBL-204ENST00000504430 ATF6BQ99941 703 aa4.76□□□□□ -1.65
NIPBL-204ENST00000504430 KLHDC3Q9BQ90 382 aa4.76□□□□□ -1.65
NIPBL-204ENST00000504430 C1QTNF7Q9BXJ2 289 aa4.76□□□□□ -1.65
NIPBL-204ENST00000504430 FAM107BQ9H098 131 aa4.76□□□□□ -1.65
NIPBL-204ENST00000504430 ABCD2Q9UBJ2 740 aa4.76□□□□□ -1.65
NIPBL-204ENST00000504430 MIOXQ9UGB7 285 aa4.76□□□□□ -1.65
NIPBL-204ENST00000504430 PEG3Q9GZU2 1588 aa4.75□□□□□ -1.65
NIPBL-204ENST00000504430 RAD50Q92878 1312 aa4.75□□□□□ -1.65
NIPBL-204ENST00000504430 LOC105371242A0A075B767 164 aa4.75□□□□□ -1.65
NIPBL-204ENST00000504430 LRRC3CA6NJW4 275 aa4.75□□□□□ -1.65
NIPBL-204ENST00000504430 ERVV-1B6SEH8 477 aa4.75□□□□□ -1.65
NIPBL-204ENST00000504430 BTBD19C9JJ37 291 aa4.75□□□□□ -1.65
NIPBL-204ENST00000504430 CYP7B1O75881 506 aa4.75□□□□□ -1.65
NIPBL-204ENST00000504430 CA1P00915 261 aaPredicted RBP4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms