RNA–Protein interactions for RNA: ENST00000502394.1

MATR3-231, Transcript of matrin 3, human

TSL 4

Gene MATR3, Length 589 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-231	ENST00000502394	SLC26A5	P58743	744 aa		11.26	□□□□□ -0.61
MATR3-231	ENST00000502394	RPS18	P62269	152 aa	Known RBP	11.26	□□□□□ -0.61
MATR3-231	ENST00000502394	MRPS22	P82650	360 aa	Known RBP	11.26	□□□□□ -0.61
MATR3-231	ENST00000502394	ELOA	Q14241	798 aa	Known RBP	11.26	□□□□□ -0.61
MATR3-231	ENST00000502394	SSPN	Q14714	243 aa		11.26	□□□□□ -0.61
MATR3-231	ENST00000502394	ARHGAP11B	Q3KRB8	267 aa		11.26	□□□□□ -0.61
MATR3-231	ENST00000502394	RPS26P11	Q5JNZ5	115 aa	Predicted RBP	11.26	□□□□□ -0.61
MATR3-231	ENST00000502394	AAGAB	Q6PD74	315 aa		11.26	□□□□□ -0.61
MATR3-231	ENST00000502394	KIRREL2	Q6UWL6	708 aa		11.26	□□□□□ -0.61
MATR3-231	ENST00000502394	RNF111	Q6ZNA4	994 aa		11.26	□□□□□ -0.61
MATR3-231	ENST00000502394	FRRS1	Q6ZNA5	592 aa		11.26	□□□□□ -0.61
MATR3-231	ENST00000502394	LRRC74B	Q6ZQY2	392 aa		11.26	□□□□□ -0.61
MATR3-231	ENST00000502394	CBLL1	Q75N03	491 aa		11.26	□□□□□ -0.61
MATR3-231	ENST00000502394	EIF3M	Q7L2H7	374 aa	Known RBP	11.26	□□□□□ -0.61
MATR3-231	ENST00000502394	PPP1R32	Q7Z5V6	425 aa		11.26	□□□□□ -0.61
MATR3-231	ENST00000502394	EID3	Q8N140	333 aa		11.26	□□□□□ -0.61
MATR3-231	ENST00000502394	PAPD5	Q8NDF8	572 aa	Known RBP	11.26	□□□□□ -0.61
MATR3-231	ENST00000502394	B3GNT7	Q8NFL0	401 aa		11.26	□□□□□ -0.61
MATR3-231	ENST00000502394	BBS10	Q8TAM1	723 aa		11.26	□□□□□ -0.61
MATR3-231	ENST00000502394	SLC9A6	Q92581	669 aa		11.26	□□□□□ -0.61
MATR3-231	ENST00000502394	NCLN	Q969V3	563 aa		11.26	□□□□□ -0.61
MATR3-231	ENST00000502394	SLCO4A1	Q96BD0	722 aa		11.26	□□□□□ -0.61
MATR3-231	ENST00000502394	NACC2	Q96BF6	587 aa		11.26	□□□□□ -0.61
MATR3-231	ENST00000502394	TAMM41	Q96BW9	452 aa		11.26	□□□□□ -0.61
MATR3-231	ENST00000502394	IMMP1L	Q96LU5	166 aa		11.26	□□□□□ -0.61
MATR3-231	ENST00000502394	SDF2	Q99470	211 aa		11.26	□□□□□ -0.61
MATR3-231	ENST00000502394	LPAR4	Q99677	370 aa		11.26	□□□□□ -0.61
MATR3-231	ENST00000502394	ZNF350	Q9GZX5	532 aa		11.26	□□□□□ -0.61
MATR3-231	ENST00000502394	SAP130	Q9H0E3	1048 aa		11.26	□□□□□ -0.61
MATR3-231	ENST00000502394	PCSK5	Q92824	1860 aa		11.25	□□□□□ -0.61
MATR3-231	ENST00000502394	GXYLT2	A0PJZ3	443 aa		11.25	□□□□□ -0.61
MATR3-231	ENST00000502394	T	O15178	435 aa		11.25	□□□□□ -0.61
MATR3-231	ENST00000502394	ST8SIA5	O15466	376 aa		11.25	□□□□□ -0.61
MATR3-231	ENST00000502394	SLC28A2	O43868	658 aa		11.25	□□□□□ -0.61
MATR3-231	ENST00000502394	PRKN	O60260	465 aa	Predicted RBP	11.25	□□□□□ -0.61
MATR3-231	ENST00000502394	FKBP6	O75344	327 aa		11.25	□□□□□ -0.61
MATR3-231	ENST00000502394	KRT36	O76013	467 aa		11.25	□□□□□ -0.61
MATR3-231	ENST00000502394	SEC24D	O94855	1032 aa	Predicted RBP	11.25	□□□□□ -0.61
MATR3-231	ENST00000502394	H6PD	O95479	791 aa		11.25	□□□□□ -0.61
MATR3-231	ENST00000502394	STAMBP	O95630	424 aa		11.25	□□□□□ -0.61
MATR3-231	ENST00000502394	SERPINA1	P01009	418 aa		11.25	□□□□□ -0.61
MATR3-231	ENST00000502394	SEMG1	P04279	462 aa		11.25	□□□□□ -0.61
MATR3-231	ENST00000502394	GPI	P06744	558 aa		11.25	□□□□□ -0.61
MATR3-231	ENST00000502394	NR2F1	P10589	423 aa		11.25	□□□□□ -0.61
MATR3-231	ENST00000502394	UMPS	P11172	480 aa		11.25	□□□□□ -0.61
MATR3-231	ENST00000502394	ETS2	P15036	469 aa		11.25	□□□□□ -0.61
MATR3-231	ENST00000502394	DLST	P36957	453 aa		11.25	□□□□□ -0.61
MATR3-231	ENST00000502394	ERF	P50548	548 aa		11.25	□□□□□ -0.61
MATR3-231	ENST00000502394	CRISP3	P54108	245 aa		11.25	□□□□□ -0.61
MATR3-231	ENST00000502394	RPS15	P62841	145 aa	Known RBP	11.25	□□□□□ -0.61
MATR3-231	ENST00000502394	POU6F2	P78424	691 aa	Predicted RBP	11.25	□□□□□ -0.61
MATR3-231	ENST00000502394	LINC01559	Q495D7	138 aa		11.25	□□□□□ -0.61
MATR3-231	ENST00000502394	DCST2	Q5T1A1	773 aa		11.25	□□□□□ -0.61
MATR3-231	ENST00000502394	ATAD3B	Q5T9A4	648 aa		11.25	□□□□□ -0.61
MATR3-231	ENST00000502394	OLIG3	Q7RTU3	272 aa		11.25	□□□□□ -0.61
MATR3-231	ENST00000502394	GALNT10	Q86SR1	603 aa		11.25	□□□□□ -0.61
MATR3-231	ENST00000502394	PATL1	Q86TB9	770 aa	Known RBP	11.25	□□□□□ -0.61
MATR3-231	ENST00000502394	SPATA24	Q86W54	205 aa		11.25	□□□□□ -0.61
MATR3-231	ENST00000502394	FAM86B1	Q8N7N1	296 aa		11.25	□□□□□ -0.61
MATR3-231	ENST00000502394	COX18	Q8N8Q8	333 aa		11.25	□□□□□ -0.61
MATR3-231	ENST00000502394	C17orf47	Q8NEP4	570 aa		11.25	□□□□□ -0.61
MATR3-231	ENST00000502394	OR11G2	Q8NGC1	345 aa		11.25	□□□□□ -0.61
MATR3-231	ENST00000502394	OR8K3	Q8NH51	312 aa		11.25	□□□□□ -0.61
MATR3-231	ENST00000502394	ADAMTS17	Q8TE56	1095 aa		11.25	□□□□□ -0.61
MATR3-231	ENST00000502394	CANT1	Q8WVQ1	401 aa		11.25	□□□□□ -0.61
MATR3-231	ENST00000502394	PIK3R3	Q92569	461 aa		11.25	□□□□□ -0.61
MATR3-231	ENST00000502394	POP5	Q969H6	163 aa	Known RBP	11.25	□□□□□ -0.61
MATR3-231	ENST00000502394	FAM162A	Q96A26	154 aa		11.25	□□□□□ -0.61
MATR3-231	ENST00000502394	VMP1	Q96GC9	406 aa		11.25	□□□□□ -0.61
MATR3-231	ENST00000502394	LRGUK	Q96M69	825 aa		11.25	□□□□□ -0.61
MATR3-231	ENST00000502394	RNF145	Q96MT1	663 aa		11.25	□□□□□ -0.61
MATR3-231	ENST00000502394	TREX2	Q9BQ50	279 aa	Predicted RBP	11.25	□□□□□ -0.61
MATR3-231	ENST00000502394	BTBD2	Q9BX70	525 aa		11.25	□□□□□ -0.61
MATR3-231	ENST00000502394	WWTR1	Q9GZV5	400 aa		11.25	□□□□□ -0.61
MATR3-231	ENST00000502394	S100A14	Q9HCY8	104 aa		11.25	□□□□□ -0.61
MATR3-231	ENST00000502394	CCM2L	Q9NUG4	571 aa	Predicted RBP	11.25	□□□□□ -0.61
MATR3-231	ENST00000502394	EXD2	Q9NVH0	621 aa		11.25	□□□□□ -0.61
MATR3-231	ENST00000502394	CALML5	Q9NZT1	146 aa		11.25	□□□□□ -0.61
MATR3-231	ENST00000502394	GPC6	Q9Y625	555 aa	Predicted RBP	11.25	□□□□□ -0.61
MATR3-231	ENST00000502394		A0A0G2JPF8	293 aa		11.24	□□□□□ -0.61
MATR3-231	ENST00000502394	DHRS12	A0PJE2	317 aa		11.24	□□□□□ -0.61
MATR3-231	ENST00000502394	FRG2C	A6NGY1	282 aa		11.24	□□□□□ -0.61
MATR3-231	ENST00000502394	TMEM200C	A6NKL6	621 aa		11.24	□□□□□ -0.61
MATR3-231	ENST00000502394	HNRNPCL2	B2RXH8	293 aa		11.24	□□□□□ -0.61
MATR3-231	ENST00000502394	HNRNPCL3	B7ZW38	293 aa		11.24	□□□□□ -0.61
MATR3-231	ENST00000502394		M0QX08	132 aa		11.24	□□□□□ -0.61
MATR3-231	ENST00000502394	GMNN	O75496	209 aa		11.24	□□□□□ -0.61
MATR3-231	ENST00000502394	KCNK2	O95069	426 aa		11.24	□□□□□ -0.61
MATR3-231	ENST00000502394	MFN2	O95140	757 aa		11.24	□□□□□ -0.61
MATR3-231	ENST00000502394	IGKV1D-16	P01601	117 aa		11.24	□□□□□ -0.61
MATR3-231	ENST00000502394	HNRNPCL4	P0DMR1	293 aa		11.24	□□□□□ -0.61
MATR3-231	ENST00000502394	LIPC	P11150	499 aa		11.24	□□□□□ -0.61
MATR3-231	ENST00000502394	CD247	P20963	164 aa		11.24	□□□□□ -0.61
MATR3-231	ENST00000502394	DRD5	P21918	477 aa		11.24	□□□□□ -0.61
MATR3-231	ENST00000502394	RPS4Y1	P22090	263 aa	Known RBP	11.24	□□□□□ -0.61
MATR3-231	ENST00000502394	AQP1	P29972	269 aa		11.24	□□□□□ -0.61
MATR3-231	ENST00000502394	SLC7A1	P30825	629 aa		11.24	□□□□□ -0.61
MATR3-231	ENST00000502394	GABRA3	P34903	492 aa		11.24	□□□□□ -0.61
MATR3-231	ENST00000502394	PIGA	P37287	484 aa		11.24	□□□□□ -0.61
MATR3-231	ENST00000502394	DCAF7	P61962	342 aa		11.24	□□□□□ -0.61

Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms