RNA–Protein interactions for RNA: ENST00000497960.5

NUP50-219, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 986 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-219ENST00000497960 EPGNQ6UW88 154 aa14.05□□□□□ -0.16
NUP50-219ENST00000497960 LARP4Q71RC2 724 aaKnown RBP eCLIP14.05□□□□□ -0.16
NUP50-219ENST00000497960 SIMC1Q8NDZ2 872 aa14.05□□□□□ -0.16
NUP50-219ENST00000497960 OR5M9Q8NGP3 310 aa14.05□□□□□ -0.16
NUP50-219ENST00000497960 CEP70Q8NHQ1 597 aa14.05□□□□□ -0.16
NUP50-219ENST00000497960 ACTRT2Q8TDY3 377 aa14.05□□□□□ -0.16
NUP50-219ENST00000497960 CA5BP1Q8WTZ4 195 aa14.05□□□□□ -0.16
NUP50-219ENST00000497960 RND1Q92730 232 aa14.05□□□□□ -0.16
NUP50-219ENST00000497960 MARVELD3Q96A59 401 aa14.05□□□□□ -0.16
NUP50-219ENST00000497960 MARK4Q96L34 752 aa14.05□□□□□ -0.16
NUP50-219ENST00000497960 OR52B2Q96RD2 323 aa14.05□□□□□ -0.16
NUP50-219ENST00000497960 NSRP1Q9H0G5 558 aaKnown RBP14.05□□□□□ -0.16
NUP50-219ENST00000497960 ACKR4Q9NPB9 350 aa14.05□□□□□ -0.16
NUP50-219ENST00000497960 TCF7L2Q9NQB0 619 aa14.05□□□□□ -0.16
NUP50-219ENST00000497960 PNPLA3Q9NST1 481 aa14.05□□□□□ -0.16
NUP50-219ENST00000497960 ASIC5Q9NY37 505 aa14.05□□□□□ -0.16
NUP50-219ENST00000497960 TAS2R9Q9NYW1 312 aa14.05□□□□□ -0.16
NUP50-219ENST00000497960 TAS2R7Q9NYW3 318 aa14.05□□□□□ -0.16
NUP50-219ENST00000497960 BAIAP2L1Q9UHR4 511 aa14.05□□□□□ -0.16
NUP50-219ENST00000497960 GPR55Q9Y2T6 319 aaPredicted RBP14.05□□□□□ -0.16
NUP50-219ENST00000497960 A0A0G2JND7 137 aa14.04□□□□□ -0.16
NUP50-219ENST00000497960 MYO1GB0I1T2 1018 aa14.04□□□□□ -0.16
NUP50-219ENST00000497960 E9PBE3 544 aa14.04□□□□□ -0.16
NUP50-219ENST00000497960 TO15178 435 aa14.04□□□□□ -0.16
NUP50-219ENST00000497960 COQ9O75208 318 aa14.04□□□□□ -0.16
NUP50-219ENST00000497960 TRAPPC6AO75865 159 aa14.04□□□□□ -0.16
NUP50-219ENST00000497960 SLITRK5O94991 958 aa14.04□□□□□ -0.16
NUP50-219ENST00000497960 G6PDP11413 515 aa14.04□□□□□ -0.16
NUP50-219ENST00000497960 ACVR2AP27037 513 aa14.04□□□□□ -0.16
NUP50-219ENST00000497960 KRT20P35900 424 aa14.04□□□□□ -0.16
NUP50-219ENST00000497960 IDH3AP50213 366 aa14.04□□□□□ -0.16
NUP50-219ENST00000497960 DIO3P55073 304 aa14.04□□□□□ -0.16
NUP50-219ENST00000497960 PSPHP78330 225 aa14.04□□□□□ -0.16
NUP50-219ENST00000497960 LSM12Q3MHD2 195 aaKnown RBP14.04□□□□□ -0.16
NUP50-219ENST00000497960 EMC4Q5J8M3 183 aa14.04□□□□□ -0.16
NUP50-219ENST00000497960 SPATA19Q7Z5L4 167 aa14.04□□□□□ -0.16
NUP50-219ENST00000497960 RFWD2Q8NHY2 731 aa14.04□□□□□ -0.16
NUP50-219ENST00000497960 PUM2Q8TB72 1066 aaKnown RBP eCLIP14.04□□□□□ -0.16
NUP50-219ENST00000497960 ASB5Q8WWX0 329 aa14.04□□□□□ -0.16
NUP50-219ENST00000497960 CHMP6Q96FZ7 201 aa14.04□□□□□ -0.16
NUP50-219ENST00000497960 EGLN2Q96KS0 407 aa14.04□□□□□ -0.16
NUP50-219ENST00000497960 BTBD9Q96Q07 612 aa14.04□□□□□ -0.16
NUP50-219ENST00000497960 EBF4Q9BQW3 602 aa14.04□□□□□ -0.16
NUP50-219ENST00000497960 ANKRA2Q9H9E1 313 aa14.04□□□□□ -0.16
NUP50-219ENST00000497960 AIG1Q9NVV5 245 aa14.04□□□□□ -0.16
NUP50-219ENST00000497960 CREBBPQ92793 2442 aa14.03□□□□□ -0.16
NUP50-219ENST00000497960 SCAMP2O15127 329 aaKnown RBP14.03□□□□□ -0.16
NUP50-219ENST00000497960 ABCB7O75027 752 aa14.03□□□□□ -0.16
NUP50-219ENST00000497960 WDR1O75083 606 aa14.03□□□□□ -0.16
NUP50-219ENST00000497960 ERN1O75460 977 aaKnown RBP14.03□□□□□ -0.16
NUP50-219ENST00000497960 REM1O75628 298 aa14.03□□□□□ -0.16
NUP50-219ENST00000497960 ALDOCP09972 364 aaKnown RBP14.03□□□□□ -0.16
NUP50-219ENST00000497960 DDX5P17844 614 aaKnown RBP14.03□□□□□ -0.16
NUP50-219ENST00000497960 ELAVL4P26378 380 aaKnown RBP14.03□□□□□ -0.16
NUP50-219ENST00000497960 LSP1P33241 339 aa14.03□□□□□ -0.16
NUP50-219ENST00000497960 RPL3P39023 403 aaKnown RBP14.03□□□□□ -0.16
NUP50-219ENST00000497960 PMPCAQ10713 525 aa14.03□□□□□ -0.16
NUP50-219ENST00000497960 SF3A3Q12874 501 aaKnown RBP eCLIP14.03□□□□□ -0.16
NUP50-219ENST00000497960 SNTA1Q13424 505 aa14.03□□□□□ -0.16
NUP50-219ENST00000497960 CGB2Q6NT52 195 aa14.03□□□□□ -0.16
NUP50-219ENST00000497960 SLC30A6Q6NXT4 461 aa14.03□□□□□ -0.16
NUP50-219ENST00000497960 TMEM81Q6P7N7 255 aa14.03□□□□□ -0.16
NUP50-219ENST00000497960 R3HCC1LQ7Z5L2 792 aaKnown RBP14.03□□□□□ -0.16
NUP50-219ENST00000497960 MARVELD2Q8N4S9 558 aa14.03□□□□□ -0.16
NUP50-219ENST00000497960 OR7G2Q8NG99 324 aa14.03□□□□□ -0.16
NUP50-219ENST00000497960 NEIL3Q8TAT5 605 aa14.03□□□□□ -0.16
NUP50-219ENST00000497960 HGDQ93099 445 aa14.03□□□□□ -0.16
NUP50-219ENST00000497960 TMBIM1Q969X1 311 aa14.03□□□□□ -0.16
NUP50-219ENST00000497960 PPCDCQ96CD2 204 aa14.03□□□□□ -0.16
NUP50-219ENST00000497960 TMCO6Q96DC7 493 aa14.03□□□□□ -0.16
NUP50-219ENST00000497960 TMEM41AQ96HV5 264 aa14.03□□□□□ -0.16
NUP50-219ENST00000497960 VSTM2LQ96N03 204 aa14.03□□□□□ -0.16
NUP50-219ENST00000497960 COL21A1Q96P44 957 aa14.03□□□□□ -0.16
NUP50-219ENST00000497960 CCDC28BQ9BUN5 200 aa14.03□□□□□ -0.16
NUP50-219ENST00000497960 FAM107BQ9H098 131 aa14.03□□□□□ -0.16
NUP50-219ENST00000497960 SLC6A15Q9H2J7 730 aa14.03□□□□□ -0.16
NUP50-219ENST00000497960 REEP4Q9H6H4 257 aa14.03□□□□□ -0.16
NUP50-219ENST00000497960 FOLH1BQ9HBA9 442 aa14.03□□□□□ -0.16
NUP50-219ENST00000497960 ALKBH4Q9NXW9 302 aa14.03□□□□□ -0.16
NUP50-219ENST00000497960 FAM53CQ9NYF3 392 aa14.03□□□□□ -0.16
NUP50-219ENST00000497960 KLRF1Q9NZS2 232 aa14.03□□□□□ -0.16
NUP50-219ENST00000497960 TNFRSF10DQ9UBN6 386 aa14.03□□□□□ -0.16
NUP50-219ENST00000497960 A0A087WV62 115 aa14.02□□□□□ -0.17
NUP50-219ENST00000497960 OR6C70A6NIJ9 312 aa14.02□□□□□ -0.17
NUP50-219ENST00000497960 GNB5O14775 395 aa14.02□□□□□ -0.17
NUP50-219ENST00000497960 UBDO15205 165 aa14.02□□□□□ -0.17
NUP50-219ENST00000497960 PDPK1O15530 556 aa14.02□□□□□ -0.17
NUP50-219ENST00000497960 UGT2B11O75310 529 aa14.02□□□□□ -0.17
NUP50-219ENST00000497960 HOXD4P09016 255 aaPredicted RBP14.02□□□□□ -0.17
NUP50-219ENST00000497960 COX6B1P14854 86 aa14.02□□□□□ -0.17
NUP50-219ENST00000497960 GABRA1P14867 456 aa14.02□□□□□ -0.17
NUP50-219ENST00000497960 IDO1P14902 403 aa14.02□□□□□ -0.17
NUP50-219ENST00000497960 CHRNB4P30926 498 aa14.02□□□□□ -0.17
NUP50-219ENST00000497960 TRPC1P48995 793 aa14.02□□□□□ -0.17
NUP50-219ENST00000497960 CDK9P50750 372 aaKnown RBP14.02□□□□□ -0.17
NUP50-219ENST00000497960 CORO7P57737 925 aa14.02□□□□□ -0.17
NUP50-219ENST00000497960 STX1BP61266 288 aa14.02□□□□□ -0.17
NUP50-219ENST00000497960 ZNF155Q12901 538 aaPredicted RBP14.02□□□□□ -0.17
NUP50-219ENST00000497960 TOMM20Q15388 145 aa14.02□□□□□ -0.17
NUP50-219ENST00000497960 CDSNQ15517 529 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms