RNA–Protein interactions for RNA: ENST00000497871.1

ATPAF2-209, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 2

Gene ATPAF2, Length 633 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-209ENST00000497871 PLXDC2Q6UX71 529 aa16.52■□□□□ 0.24
ATPAF2-209ENST00000497871 LCA5Q86VQ0 697 aa16.52■□□□□ 0.24
ATPAF2-209ENST00000497871 C16orf78Q8WTQ4 265 aa16.52■□□□□ 0.24
ATPAF2-209ENST00000497871 RNF138Q8WVD3 245 aa16.52■□□□□ 0.24
ATPAF2-209ENST00000497871 SMPDL3BQ92485 455 aa16.52■□□□□ 0.24
ATPAF2-209ENST00000497871 EXOSC8Q96B26 276 aaKnown RBP16.52■□□□□ 0.24
ATPAF2-209ENST00000497871 ACPTQ9BZG2 426 aa16.52■□□□□ 0.24
ATPAF2-209ENST00000497871 STMN4Q9H169 189 aaPredicted RBP16.52■□□□□ 0.24
ATPAF2-209ENST00000497871 FOLH1BQ9HBA9 442 aa16.52■□□□□ 0.24
ATPAF2-209ENST00000497871 TAS2R9Q9NYW1 312 aa16.52■□□□□ 0.24
ATPAF2-209ENST00000497871 NDRG3Q9UGV2 375 aa16.52■□□□□ 0.24
ATPAF2-209ENST00000497871 DKKL1Q9UK85 242 aa16.52■□□□□ 0.24
ATPAF2-209ENST00000497871 DOCK7Q96N67 2140 aa16.51■□□□□ 0.23
ATPAF2-209ENST00000497871 TNFSF12-TNFSF13A0A0A6YY99 330 aa16.51■□□□□ 0.23
ATPAF2-209ENST00000497871 SH3D21A4FU49 640 aa16.51■□□□□ 0.23
ATPAF2-209ENST00000497871 HCRTR2O43614 444 aa16.51■□□□□ 0.23
ATPAF2-209ENST00000497871 DLX3O60479 287 aa16.51■□□□□ 0.23
ATPAF2-209ENST00000497871 NME6O75414 186 aaPredicted RBP16.51■□□□□ 0.23
ATPAF2-209ENST00000497871 TNFSF13O75888 250 aa16.51■□□□□ 0.23
ATPAF2-209ENST00000497871 GRK2P25098 689 aa16.51■□□□□ 0.23
ATPAF2-209ENST00000497871 DPP4P27487 766 aa16.51■□□□□ 0.23
ATPAF2-209ENST00000497871 IL12BP29460 328 aa16.51■□□□□ 0.23
ATPAF2-209ENST00000497871 HOXC12P31275 282 aa16.51■□□□□ 0.23
ATPAF2-209ENST00000497871 GSTM5P46439 218 aa16.51■□□□□ 0.23
ATPAF2-209ENST00000497871 GAS1P54826 345 aa16.51■□□□□ 0.23
ATPAF2-209ENST00000497871 ACSM2AQ08AH3 577 aa16.51■□□□□ 0.23
ATPAF2-209ENST00000497871 ACSM2BQ68CK6 577 aa16.51■□□□□ 0.23
ATPAF2-209ENST00000497871 NPSR1Q6W5P4 371 aa16.51■□□□□ 0.23
ATPAF2-209ENST00000497871 GRAMD2AQ8IUY3 354 aa16.51■□□□□ 0.23
ATPAF2-209ENST00000497871 GCNT2Q8N0V5 402 aa16.51■□□□□ 0.23
ATPAF2-209ENST00000497871 MTBPQ96DY7 904 aa16.51■□□□□ 0.23
ATPAF2-209ENST00000497871 C11orf24Q96F05 449 aaPredicted RBP16.51■□□□□ 0.23
ATPAF2-209ENST00000497871 APIPQ96GX9 242 aa16.51■□□□□ 0.23
ATPAF2-209ENST00000497871 TMEM237Q96Q45 408 aa16.51■□□□□ 0.23
ATPAF2-209ENST00000497871 SHCBP1LQ9BZQ2 653 aa16.51■□□□□ 0.23
ATPAF2-209ENST00000497871 NEUROD4Q9HD90 331 aa16.51■□□□□ 0.23
ATPAF2-209ENST00000497871 SIRT5Q9NXA8 310 aa16.51■□□□□ 0.23
ATPAF2-209ENST00000497871 PACSIN3Q9UKS6 424 aa16.51■□□□□ 0.23
ATPAF2-209ENST00000497871 STK38LQ9Y2H1 464 aa16.51■□□□□ 0.23
ATPAF2-209ENST00000497871 EXPH5Q8NEV8 1989 aa16.51■□□□□ 0.23
ATPAF2-209ENST00000497871 VPS13CQ709C8 3753 aa16.51■□□□□ 0.23
ATPAF2-209ENST00000497871 EXOC1LA0A1B0GW35 172 aa16.5■□□□□ 0.23
ATPAF2-209ENST00000497871 CCDC151A5D8V7 595 aa16.5■□□□□ 0.23
ATPAF2-209ENST00000497871 TGM6O95932 706 aa16.5■□□□□ 0.23
ATPAF2-209ENST00000497871 CRHP06850 196 aa16.5■□□□□ 0.23
ATPAF2-209ENST00000497871 ATP5F1P24539 256 aaPredicted RBP16.5■□□□□ 0.23
ATPAF2-209ENST00000497871 TIA1P31483 386 aaKnown RBP eCLIP16.5■□□□□ 0.23
ATPAF2-209ENST00000497871 PCYT1AP49585 367 aa16.5■□□□□ 0.23
ATPAF2-209ENST00000497871 PRKAA2P54646 552 aa16.5■□□□□ 0.23
ATPAF2-209ENST00000497871 DSCR4P56555 118 aaPredicted RBP16.5■□□□□ 0.23
ATPAF2-209ENST00000497871 POU4F3Q15319 338 aa16.5■□□□□ 0.23
ATPAF2-209ENST00000497871 GLE1Q53GS7 698 aaKnown RBP16.5■□□□□ 0.23
ATPAF2-209ENST00000497871 OR2A2Q6IF42 318 aa16.5■□□□□ 0.23
ATPAF2-209ENST00000497871 CHMP1BQ7LBR1 199 aa16.5■□□□□ 0.23
ATPAF2-209ENST00000497871 SLC22A9Q8IVM8 553 aa16.5■□□□□ 0.23
ATPAF2-209ENST00000497871 SLC44A2Q8IWA5 706 aaPredicted RBP16.5■□□□□ 0.23
ATPAF2-209ENST00000497871 FAM9CQ8IZT9 166 aa16.5■□□□□ 0.23
ATPAF2-209ENST00000497871 NOA1Q8NC60 698 aaKnown RBP16.5■□□□□ 0.23
ATPAF2-209ENST00000497871 WFDC11Q8NEX6 87 aa16.5■□□□□ 0.23
ATPAF2-209ENST00000497871 OR7G2Q8NG99 324 aa16.5■□□□□ 0.23
ATPAF2-209ENST00000497871 OR4N2Q8NGD1 307 aa16.5■□□□□ 0.23
ATPAF2-209ENST00000497871 BEX4Q9NWD9 120 aaPredicted RBP16.5■□□□□ 0.23
ATPAF2-209ENST00000497871 SENP1Q9P0U3 644 aa16.5■□□□□ 0.23
ATPAF2-209ENST00000497871 OR10H1Q9Y4A9 318 aa16.5■□□□□ 0.23
ATPAF2-209ENST00000497871 A0A1W2PNV4 684 aa16.49■□□□□ 0.23
ATPAF2-209ENST00000497871 A0A1W2PPR1 153 aa16.49■□□□□ 0.23
ATPAF2-209ENST00000497871 SERTM1A2A2V5 107 aa16.49■□□□□ 0.23
ATPAF2-209ENST00000497871 MSTNO14793 375 aa16.49■□□□□ 0.23
ATPAF2-209ENST00000497871 ENO1P06733 434 aaKnown RBP16.49■□□□□ 0.23
ATPAF2-209ENST00000497871 CTAGE8P0CG41 777 aa16.49■□□□□ 0.23
ATPAF2-209ENST00000497871 PEPDP12955 493 aa16.49■□□□□ 0.23
ATPAF2-209ENST00000497871 CD53P19397 219 aa16.49■□□□□ 0.23
ATPAF2-209ENST00000497871 HTR6P50406 440 aa16.49■□□□□ 0.23
ATPAF2-209ENST00000497871 PKNOX1P55347 436 aa16.49■□□□□ 0.23
ATPAF2-209ENST00000497871 B3GALT5-AS1P59052 145 aa16.49■□□□□ 0.23
ATPAF2-209ENST00000497871 PSG6Q00889 435 aa16.49■□□□□ 0.23
ATPAF2-209ENST00000497871 LCP2Q13094 533 aa16.49■□□□□ 0.23
ATPAF2-209ENST00000497871 CTAGE4Q8IX94 777 aa16.49■□□□□ 0.23
ATPAF2-209ENST00000497871 OR4K17Q8NGC6 315 aa16.49■□□□□ 0.23
ATPAF2-209ENST00000497871 EFHD2Q96C19 240 aaPredicted RBP16.49■□□□□ 0.23
ATPAF2-209ENST00000497871 BBS4Q96RK4 519 aa16.49■□□□□ 0.23
ATPAF2-209ENST00000497871 SDHAF3Q9NRP4 125 aa16.49■□□□□ 0.23
ATPAF2-209ENST00000497871 EIF3LQ9Y262 564 aaKnown RBP16.49■□□□□ 0.23
ATPAF2-209ENST00000497871 FLNAP21333 2647 aaKnown RBP16.49■□□□□ 0.23
ATPAF2-209ENST00000497871 A0A087WV62 115 aa16.48■□□□□ 0.23
ATPAF2-209ENST00000497871 MYO1GB0I1T2 1018 aa16.48■□□□□ 0.23
ATPAF2-209ENST00000497871 B4DXG7 233 aa16.48■□□□□ 0.23
ATPAF2-209ENST00000497871 COQ9O75208 318 aa16.48■□□□□ 0.23
ATPAF2-209ENST00000497871 ANXA4P09525 319 aaPredicted RBP16.48■□□□□ 0.23
ATPAF2-209ENST00000497871 DDCP20711 480 aa16.48■□□□□ 0.23
ATPAF2-209ENST00000497871 GCAP28676 217 aa16.48■□□□□ 0.23
ATPAF2-209ENST00000497871 EEFSECP57772 596 aaKnown RBP16.48■□□□□ 0.23
ATPAF2-209ENST00000497871 BTKQ06187 659 aa16.48■□□□□ 0.23
ATPAF2-209ENST00000497871 CYP27C1Q4G0S4 372 aa16.48■□□□□ 0.23
ATPAF2-209ENST00000497871 P4HA3Q7Z4N8 544 aa16.48■□□□□ 0.23
ATPAF2-209ENST00000497871 BIVMQ86UB2 503 aa16.48■□□□□ 0.23
ATPAF2-209ENST00000497871 FADS6Q8N9I5 356 aa16.48■□□□□ 0.23
ATPAF2-209ENST00000497871 MNS1Q8NEH6 495 aa16.48■□□□□ 0.23
ATPAF2-209ENST00000497871 STARD4Q96DR4 205 aa16.48■□□□□ 0.23
ATPAF2-209ENST00000497871 L3HYPDHQ96EM0 354 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms