RNA–Protein interactions for RNA: ENST00000497470.1

SCAMP3-209, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 5

Gene SCAMP3, Length 845 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-209ENST00000497470 ARAFP10398 606 aa18.23■□□□□ 0.51
SCAMP3-209ENST00000497470 NR0B1P51843 470 aaKnown RBP18.23■□□□□ 0.51
SCAMP3-209ENST00000497470 SLC7A2P52569 658 aa18.23■□□□□ 0.51
SCAMP3-209ENST00000497470 MTPNP58546 118 aa18.23■□□□□ 0.51
SCAMP3-209ENST00000497470 SLC25A3Q00325 362 aa18.23■□□□□ 0.51
SCAMP3-209ENST00000497470 EFR3AQ14156 821 aa18.23■□□□□ 0.51
SCAMP3-209ENST00000497470 DEFB109BQ30KR1 87 aa18.23■□□□□ 0.51
SCAMP3-209ENST00000497470 RABL3Q5HYI8 236 aa18.23■□□□□ 0.51
SCAMP3-209ENST00000497470 COX20Q5RI15 118 aa18.23■□□□□ 0.51
SCAMP3-209ENST00000497470 GCNT6Q5T4J0 391 aa18.23■□□□□ 0.51
SCAMP3-209ENST00000497470 ATP1A1-AS1Q5TC04 95 aa18.23■□□□□ 0.51
SCAMP3-209ENST00000497470 ABHD17BQ5VST6 288 aa18.23■□□□□ 0.51
SCAMP3-209ENST00000497470 ANGPTL8Q6UXH0 198 aa18.23■□□□□ 0.51
SCAMP3-209ENST00000497470 ISLR2Q6UXK2 745 aa18.23■□□□□ 0.51
SCAMP3-209ENST00000497470 DEFB107AQ8IZN7 70 aa18.23■□□□□ 0.51
SCAMP3-209ENST00000497470 CLEC4FQ8N1N0 589 aa18.23■□□□□ 0.51
SCAMP3-209ENST00000497470 C11orf65Q8NCR3 313 aa18.23■□□□□ 0.51
SCAMP3-209ENST00000497470 BRIX1Q8TDN6 353 aaKnown RBP18.23■□□□□ 0.51
SCAMP3-209ENST00000497470 XAGE5Q8WWM1 108 aa18.23■□□□□ 0.51
SCAMP3-209ENST00000497470 DIO2Q92813 273 aa18.23■□□□□ 0.51
SCAMP3-209ENST00000497470 POP5Q969H6 163 aaKnown RBP18.23■□□□□ 0.51
SCAMP3-209ENST00000497470 RASL10BQ96S79 203 aa18.23■□□□□ 0.51
SCAMP3-209ENST00000497470 SDF2Q99470 211 aa18.23■□□□□ 0.51
SCAMP3-209ENST00000497470 SLC39A3Q9BRY0 314 aa18.23■□□□□ 0.51
SCAMP3-209ENST00000497470 MUC13Q9H3R2 512 aa18.23■□□□□ 0.51
SCAMP3-209ENST00000497470 WDR70Q9NW82 654 aa18.23■□□□□ 0.51
SCAMP3-209ENST00000497470 CD300AQ9UGN4 299 aa18.23■□□□□ 0.51
SCAMP3-209ENST00000497470 TUBD1Q9UJT1 453 aa18.23■□□□□ 0.51
SCAMP3-209ENST00000497470 OR10H1Q9Y4A9 318 aa18.23■□□□□ 0.51
SCAMP3-209ENST00000497470 NPFFR2Q9Y5X5 522 aa18.23■□□□□ 0.51
SCAMP3-209ENST00000497470 NME4O00746 187 aa18.22■□□□□ 0.51
SCAMP3-209ENST00000497470 TSPAN2O60636 221 aa18.22■□□□□ 0.51
SCAMP3-209ENST00000497470 STX11O75558 287 aa18.22■□□□□ 0.51
SCAMP3-209ENST00000497470 ITGA10O75578 1167 aa18.22■□□□□ 0.51
SCAMP3-209ENST00000497470 KCNK2O95069 426 aa18.22■□□□□ 0.51
SCAMP3-209ENST00000497470 OR12D1P0DN82 309 aa18.22■□□□□ 0.51
SCAMP3-209ENST00000497470 ETFAP13804 333 aa18.22■□□□□ 0.51
SCAMP3-209ENST00000497470 ITPKBP27987 946 aa18.22■□□□□ 0.51
SCAMP3-209ENST00000497470 ABCD3P28288 659 aa18.22■□□□□ 0.51
SCAMP3-209ENST00000497470 HTR1EP28566 365 aa18.22■□□□□ 0.51
SCAMP3-209ENST00000497470 SSR4P51571 173 aa18.22■□□□□ 0.51
SCAMP3-209ENST00000497470 CRISP3P54108 245 aa18.22■□□□□ 0.51
SCAMP3-209ENST00000497470 CORO7P57737 925 aa18.22■□□□□ 0.51
SCAMP3-209ENST00000497470 MFAP5Q13361 173 aa18.22■□□□□ 0.51
SCAMP3-209ENST00000497470 ADRM1Q16186 407 aa18.22■□□□□ 0.51
SCAMP3-209ENST00000497470 NTRK2Q16620 822 aa18.22■□□□□ 0.51
SCAMP3-209ENST00000497470 ZSWIM7Q19AV6 140 aa18.22■□□□□ 0.51
SCAMP3-209ENST00000497470 INTS11Q5TA45 600 aaKnown RBP18.22■□□□□ 0.51
SCAMP3-209ENST00000497470 TNFAIP8L2Q6P589 184 aaPredicted RBP18.22■□□□□ 0.51
SCAMP3-209ENST00000497470 LYPD8Q6UX82 237 aa18.22■□□□□ 0.51
SCAMP3-209ENST00000497470 IGFL3Q6UXB1 125 aa18.22■□□□□ 0.51
SCAMP3-209ENST00000497470 RINLQ6ZS11 566 aa18.22■□□□□ 0.51
SCAMP3-209ENST00000497470 NUP54Q7Z3B4 507 aa18.22■□□□□ 0.51
SCAMP3-209ENST00000497470 GOLM1Q8NBJ4 401 aa18.22■□□□□ 0.51
SCAMP3-209ENST00000497470 OR10A6Q8NH74 314 aa18.22■□□□□ 0.51
SCAMP3-209ENST00000497470 DOK4Q8TEW6 326 aa18.22■□□□□ 0.51
SCAMP3-209ENST00000497470 JADE3Q92613 823 aa18.22■□□□□ 0.51
SCAMP3-209ENST00000497470 HAS2Q92819 552 aa18.22■□□□□ 0.51
SCAMP3-209ENST00000497470 GAL3ST4Q96RP7 486 aa18.22■□□□□ 0.51
SCAMP3-209ENST00000497470 ZNF350Q9GZX5 532 aa18.22■□□□□ 0.51
SCAMP3-209ENST00000497470 ALG2Q9H553 416 aa18.22■□□□□ 0.51
SCAMP3-209ENST00000497470 CDCP1Q9H5V8 836 aa18.22■□□□□ 0.51
SCAMP3-209ENST00000497470 ZNF552Q9H707 407 aaPredicted RBP18.22■□□□□ 0.51
SCAMP3-209ENST00000497470 SUCOQ9UBS9 1254 aaKnown RBP18.22■□□□□ 0.51
SCAMP3-209ENST00000497470 PCDHGA10Q9Y5H3 936 aa18.22■□□□□ 0.51
SCAMP3-209ENST00000497470 A0A0G2JPF8 293 aa18.21■□□□□ 0.51
SCAMP3-209ENST00000497470 HNRNPCL2B2RXH8 293 aa18.21■□□□□ 0.51
SCAMP3-209ENST00000497470 HNRNPCL3B7ZW38 293 aa18.21■□□□□ 0.51
SCAMP3-209ENST00000497470 RRP9O43818 475 aaKnown RBP18.21■□□□□ 0.51
SCAMP3-209ENST00000497470 PPM1BO75688 479 aa18.21■□□□□ 0.51
SCAMP3-209ENST00000497470 DNAJB5O75953 348 aa18.21■□□□□ 0.51
SCAMP3-209ENST00000497470 CELA2AP08217 269 aa18.21■□□□□ 0.51
SCAMP3-209ENST00000497470 HNRNPCL4P0DMR1 293 aa18.21■□□□□ 0.51
SCAMP3-209ENST00000497470 ETS2P15036 469 aa18.21■□□□□ 0.51
SCAMP3-209ENST00000497470 ENDOUP21128 410 aaKnown RBP18.21■□□□□ 0.51
SCAMP3-209ENST00000497470 PCGF2P35227 344 aa18.21■□□□□ 0.51
SCAMP3-209ENST00000497470 KRT20P35900 424 aa18.21■□□□□ 0.51
SCAMP3-209ENST00000497470 HLCSP50747 726 aa18.21■□□□□ 0.51
SCAMP3-209ENST00000497470 RPP38P78345 283 aaKnown RBP18.21■□□□□ 0.51
SCAMP3-209ENST00000497470 ELOAQ14241 798 aaKnown RBP18.21■□□□□ 0.51
SCAMP3-209ENST00000497470 SELPLGQ14242 412 aa18.21■□□□□ 0.51
SCAMP3-209ENST00000497470 VMACQ2NL98 169 aa18.21■□□□□ 0.51
SCAMP3-209ENST00000497470 ZNF791Q3KP31 576 aaPredicted RBP18.21■□□□□ 0.51
SCAMP3-209ENST00000497470 DCST2Q5T1A1 773 aa18.21■□□□□ 0.51
SCAMP3-209ENST00000497470 REEP3Q6NUK4 255 aa18.21■□□□□ 0.51
SCAMP3-209ENST00000497470 CCDC80Q76M96 950 aa18.21■□□□□ 0.51
SCAMP3-209ENST00000497470 ASRGL1Q7L266 308 aa18.21■□□□□ 0.51
SCAMP3-209ENST00000497470 C16orf62Q7Z3J2 963 aa18.21■□□□□ 0.51
SCAMP3-209ENST00000497470 PTRH1Q86Y79 214 aaKnown RBP18.21■□□□□ 0.51
SCAMP3-209ENST00000497470 HIPK4Q8NE63 616 aa18.21■□□□□ 0.51
SCAMP3-209ENST00000497470 OR2T12Q8NG77 320 aa18.21■□□□□ 0.51
SCAMP3-209ENST00000497470 OR52E4Q8NGH9 312 aa18.21■□□□□ 0.51
SCAMP3-209ENST00000497470 FBXO27Q8NI29 283 aa18.21■□□□□ 0.51
SCAMP3-209ENST00000497470 SLC38A5Q8WUX1 472 aa18.21■□□□□ 0.51
SCAMP3-209ENST00000497470 RNF138Q8WVD3 245 aa18.21■□□□□ 0.51
SCAMP3-209ENST00000497470 CDRT15Q96T59 188 aa18.21■□□□□ 0.51
SCAMP3-209ENST00000497470 MTHFD2LQ9H903 347 aaPredicted RBP18.21■□□□□ 0.51
SCAMP3-209ENST00000497470 GPR83Q9NYM4 423 aa18.21■□□□□ 0.51
SCAMP3-209ENST00000497470 STMN3Q9NZ72 180 aa18.21■□□□□ 0.51
SCAMP3-209ENST00000497470 PCDHGB6Q9Y5F9 930 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms