RNA–Protein interactions for RNA: ENST00000497022.1

VPS26A-208, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3

Gene VPS26A, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-208ENST00000497022 GABRR1P24046 479 aa1.96□□□□□ -2.1
VPS26A-208ENST00000497022 NF2P35240 595 aa1.96□□□□□ -2.1
VPS26A-208ENST00000497022 NSFP46459 744 aaKnown RBP1.96□□□□□ -2.1
VPS26A-208ENST00000497022 NPY2RP49146 381 aa1.96□□□□□ -2.1
VPS26A-208ENST00000497022 SGSHP51688 502 aa1.96□□□□□ -2.1
VPS26A-208ENST00000497022 RPL32P62910 135 aaKnown RBP1.96□□□□□ -2.1
VPS26A-208ENST00000497022 ZNF45Q02386 682 aa1.96□□□□□ -2.1
VPS26A-208ENST00000497022 ZKSCAN8Q15776 578 aaPredicted RBP1.96□□□□□ -2.1
VPS26A-208ENST00000497022 MPPED2Q15777 294 aa1.96□□□□□ -2.1
VPS26A-208ENST00000497022 AARDQ4LEZ3 155 aa1.96□□□□□ -2.1
VPS26A-208ENST00000497022 ZNF57Q68EA5 555 aaPredicted RBP1.96□□□□□ -2.1
VPS26A-208ENST00000497022 C11orf88Q6PI97 169 aa1.96□□□□□ -2.1
VPS26A-208ENST00000497022 CWC27Q6UX04 472 aaKnown RBP1.96□□□□□ -2.1
VPS26A-208ENST00000497022 B3GLCTQ6Y288 498 aa1.96□□□□□ -2.1
VPS26A-208ENST00000497022 FAM9BQ8IZU0 186 aa1.96□□□□□ -2.1
VPS26A-208ENST00000497022 CSNK1A1LQ8N752 337 aa1.96□□□□□ -2.1
VPS26A-208ENST00000497022 FBXO30Q8TB52 745 aa1.96□□□□□ -2.1
VPS26A-208ENST00000497022 RNASE8Q8TDE3 154 aaKnown RBP1.96□□□□□ -2.1
VPS26A-208ENST00000497022 TMEM37Q8WXS4 190 aa1.96□□□□□ -2.1
VPS26A-208ENST00000497022 C18orf25Q96B23 403 aaPredicted RBP1.96□□□□□ -2.1
VPS26A-208ENST00000497022 IL4I1Q96RQ9 567 aa1.96□□□□□ -2.1
VPS26A-208ENST00000497022 NICN1Q9BSH3 213 aa1.96□□□□□ -2.1
VPS26A-208ENST00000497022 GLT8D2Q9H1C3 349 aa1.96□□□□□ -2.1
VPS26A-208ENST00000497022 ZWILCHQ9H900 591 aa1.96□□□□□ -2.1
VPS26A-208ENST00000497022 STX8Q9UNK0 236 aa1.96□□□□□ -2.1
VPS26A-208ENST00000497022 IGLV3-16A0A075B6K0 115 aa1.95□□□□□ -2.1
VPS26A-208ENST00000497022 ZNF320A2RRD8 509 aa1.95□□□□□ -2.1
VPS26A-208ENST00000497022 SMIM30A4D0T7 59 aa1.95□□□□□ -2.1
VPS26A-208ENST00000497022 C5orf51A6NDU8 294 aa1.95□□□□□ -2.1
VPS26A-208ENST00000497022 H0Y626 953 aa1.95□□□□□ -2.1
VPS26A-208ENST00000497022 AKAP3O75969 853 aa1.95□□□□□ -2.1
VPS26A-208ENST00000497022 SEMG1P04279 462 aa1.95□□□□□ -2.1
VPS26A-208ENST00000497022 STK19P49842 368 aaPredicted RBP1.95□□□□□ -2.1
VPS26A-208ENST00000497022 PPOXP50336 477 aa1.95□□□□□ -2.1
VPS26A-208ENST00000497022 PDE7AQ13946 482 aa1.95□□□□□ -2.1
VPS26A-208ENST00000497022 ELAVL3Q14576 367 aaKnown RBP1.95□□□□□ -2.1
VPS26A-208ENST00000497022 ARMC3Q5W041 872 aa1.95□□□□□ -2.1
VPS26A-208ENST00000497022 DPY19L2P2Q6ZN68 376 aa1.95□□□□□ -2.1
VPS26A-208ENST00000497022 FRA10AC1Q70Z53 315 aa1.95□□□□□ -2.1
VPS26A-208ENST00000497022 HSD17B13Q7Z5P4 300 aaPredicted RBP1.95□□□□□ -2.1
VPS26A-208ENST00000497022 CCDC71LQ8N9Z2 235 aa1.95□□□□□ -2.1
VPS26A-208ENST00000497022 MLKLQ8NB16 471 aa1.95□□□□□ -2.1
VPS26A-208ENST00000497022 BCL2L2Q92843 193 aaPredicted RBP1.95□□□□□ -2.1
VPS26A-208ENST00000497022 STARD4Q96DR4 205 aa1.95□□□□□ -2.1
VPS26A-208ENST00000497022 TBX15Q96SF7 602 aa1.95□□□□□ -2.1
VPS26A-208ENST00000497022 CNPY3Q9BT09 278 aa1.95□□□□□ -2.1
VPS26A-208ENST00000497022 ABCG8Q9H221 673 aa1.95□□□□□ -2.1
VPS26A-208ENST00000497022 PTGES2Q9H7Z7 377 aa1.95□□□□□ -2.1
VPS26A-208ENST00000497022 MBD2Q9UBB5 411 aa1.95□□□□□ -2.1
VPS26A-208ENST00000497022 TRPC4Q9UBN4 977 aa1.95□□□□□ -2.1
VPS26A-208ENST00000497022 MIOXQ9UGB7 285 aa1.95□□□□□ -2.1
VPS26A-208ENST00000497022 FBXW2Q9UKT8 454 aa1.95□□□□□ -2.1
VPS26A-208ENST00000497022 NPC1L1Q9UHC9 1359 aa1.95□□□□□ -2.1
VPS26A-208ENST00000497022 ZNF263O14978 683 aa1.94□□□□□ -2.1
VPS26A-208ENST00000497022 LYPLA1O75608 230 aaPredicted RBP1.94□□□□□ -2.1
VPS26A-208ENST00000497022 GPX5O75715 221 aa1.94□□□□□ -2.1
VPS26A-208ENST00000497022 TOXO94900 526 aa1.94□□□□□ -2.1
VPS26A-208ENST00000497022 TIMP1P01033 207 aa1.94□□□□□ -2.1
VPS26A-208ENST00000497022 TOP1P11387 765 aaKnown RBP1.94□□□□□ -2.1
VPS26A-208ENST00000497022 NOP14P78316 857 aaKnown RBP1.94□□□□□ -2.1
VPS26A-208ENST00000497022 UBXN1Q04323 297 aa1.94□□□□□ -2.1
VPS26A-208ENST00000497022 RAB35Q15286 201 aa1.94□□□□□ -2.1
VPS26A-208ENST00000497022 ZNF699Q32M78 642 aa1.94□□□□□ -2.1
VPS26A-208ENST00000497022 GLRA4Q5JXX5 417 aa1.94□□□□□ -2.1
VPS26A-208ENST00000497022 HECTD3Q5T447 861 aa1.94□□□□□ -2.1
VPS26A-208ENST00000497022 METTL11BQ5VVY1 283 aa1.94□□□□□ -2.1
VPS26A-208ENST00000497022 CXCL17Q6UXB2 119 aa1.94□□□□□ -2.1
VPS26A-208ENST00000497022 ANKRD23Q86SG2 305 aa1.94□□□□□ -2.1
VPS26A-208ENST00000497022 NKAIN3Q8N8D7 197 aa1.94□□□□□ -2.1
VPS26A-208ENST00000497022 GDAP1Q8TB36 358 aa1.94□□□□□ -2.1
VPS26A-208ENST00000497022 SLC35E1Q96K37 410 aa1.94□□□□□ -2.1
VPS26A-208ENST00000497022 DEFB118Q96PH6 123 aa1.94□□□□□ -2.1
VPS26A-208ENST00000497022 TSPAN18Q96SJ8 248 aa1.94□□□□□ -2.1
VPS26A-208ENST00000497022 SCRT1Q9BWW7 348 aa1.94□□□□□ -2.1
VPS26A-208ENST00000497022 FUT8Q9BYC5 575 aa1.94□□□□□ -2.1
VPS26A-208ENST00000497022 MRPL9Q9BYD2 267 aaKnown RBP1.94□□□□□ -2.1
VPS26A-208ENST00000497022 TRPV6Q9H1D0 765 aa1.94□□□□□ -2.1
VPS26A-208ENST00000497022 OR51J1Q9H342 316 aa1.94□□□□□ -2.1
VPS26A-208ENST00000497022 GLIPR2Q9H4G4 154 aa1.94□□□□□ -2.1
VPS26A-208ENST00000497022 PATZ1Q9HBE1 687 aaKnown RBP1.94□□□□□ -2.1
VPS26A-208ENST00000497022 PIGVQ9NUD9 493 aa1.94□□□□□ -2.1
VPS26A-208ENST00000497022 AKAP7Q9P0M2 348 aaPredicted RBP1.94□□□□□ -2.1
VPS26A-208ENST00000497022 NOL7Q9UMY1 257 aaKnown RBP1.94□□□□□ -2.1
VPS26A-208ENST00000497022 PPIAL4AQ9Y536 164 aa1.94□□□□□ -2.1
VPS26A-208ENST00000497022 ANKRD30BQ9BXX2 1392 aa1.94□□□□□ -2.1
VPS26A-208ENST00000497022 GRIN2DO15399 1336 aa1.93□□□□□ -2.1
VPS26A-208ENST00000497022 A0A1B0GUA9 196 aa1.93□□□□□ -2.1
VPS26A-208ENST00000497022 NME2P1O60361 137 aa1.93□□□□□ -2.1
VPS26A-208ENST00000497022 DFNA5O60443 496 aa1.93□□□□□ -2.1
VPS26A-208ENST00000497022 ATP6V1G1O75348 118 aa1.93□□□□□ -2.1
VPS26A-208ENST00000497022 PGK2P07205 417 aa1.93□□□□□ -2.1
VPS26A-208ENST00000497022 COPB2P35606 906 aa1.93□□□□□ -2.1
VPS26A-208ENST00000497022 PITPNBP48739 271 aa1.93□□□□□ -2.1
VPS26A-208ENST00000497022 GPC3P51654 580 aa1.93□□□□□ -2.1
VPS26A-208ENST00000497022 NME5P56597 212 aa1.93□□□□□ -2.1
VPS26A-208ENST00000497022 NLRP11P59045 1033 aaKnown RBP1.93□□□□□ -2.1
VPS26A-208ENST00000497022 RPS6P62753 249 aaKnown RBP1.93□□□□□ -2.1
VPS26A-208ENST00000497022 CCZ1BP86790 482 aa1.93□□□□□ -2.1
VPS26A-208ENST00000497022 CCZ1P86791 482 aaPredicted RBP1.93□□□□□ -2.1
VPS26A-208ENST00000497022 OTUD4Q01804 1114 aaKnown RBP1.93□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms