RNA–Protein interactions for RNA: ENST00000496896.1

TRIM4-205, Transcript of tripartite motif containing 4, humanhuman

TSL 5

Gene TRIM4, Length 601 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-205ENST00000496896 SIP14410 1827 aa3.31□□□□□ -1.88
TRIM4-205ENST00000496896 UMODL1Q5DID0 1318 aa3.31□□□□□ -1.88
TRIM4-205ENST00000496896 IGHV3-20A0A0C4DH32 117 aa3.31□□□□□ -1.88
TRIM4-205ENST00000496896 SMIM31A0A1B0GVY4 71 aa3.31□□□□□ -1.88
TRIM4-205ENST00000496896 MTMR11A4FU01 709 aa3.31□□□□□ -1.88
TRIM4-205ENST00000496896 TMEM110-MUSTN1A8MSY1 372 aa3.31□□□□□ -1.88
TRIM4-205ENST00000496896 I3L4J1 428 aa3.31□□□□□ -1.88
TRIM4-205ENST00000496896 CHADO15335 359 aa3.31□□□□□ -1.88
TRIM4-205ENST00000496896 MED7O43513 233 aa3.31□□□□□ -1.88
TRIM4-205ENST00000496896 FAM189A1O60320 539 aa3.31□□□□□ -1.88
TRIM4-205ENST00000496896 CYTIPO60759 359 aa3.31□□□□□ -1.88
TRIM4-205ENST00000496896 SMIM24O75264 130 aa3.31□□□□□ -1.88
TRIM4-205ENST00000496896 CELF2O95319 508 aaKnown RBP3.31□□□□□ -1.88
TRIM4-205ENST00000496896 PENKP01210 267 aaPredicted RBP3.31□□□□□ -1.88
TRIM4-205ENST00000496896 RALAP11233 206 aa3.31□□□□□ -1.88
TRIM4-205ENST00000496896 CD59P13987 128 aa3.31□□□□□ -1.88
TRIM4-205ENST00000496896 CPA3P15088 417 aa3.31□□□□□ -1.88
TRIM4-205ENST00000496896 IL11P20809 199 aa3.31□□□□□ -1.88
TRIM4-205ENST00000496896 PRDX6P30041 224 aa3.31□□□□□ -1.88
TRIM4-205ENST00000496896 ADSSP30520 456 aa3.31□□□□□ -1.88
TRIM4-205ENST00000496896 YWHABP31946 246 aaKnown RBP3.31□□□□□ -1.88
TRIM4-205ENST00000496896 FOXN2P32314 431 aa3.31□□□□□ -1.88
TRIM4-205ENST00000496896 CDH5P33151 784 aaPredicted RBP3.31□□□□□ -1.88
TRIM4-205ENST00000496896 MAGEA6P43360 314 aa3.31□□□□□ -1.88
TRIM4-205ENST00000496896 CAPZA2P47755 286 aa3.31□□□□□ -1.88
TRIM4-205ENST00000496896 KCNJ1P48048 391 aa3.31□□□□□ -1.88
TRIM4-205ENST00000496896 MARCKSL1P49006 195 aa3.31□□□□□ -1.88
TRIM4-205ENST00000496896 SERPINB9P50453 376 aa3.31□□□□□ -1.88
TRIM4-205ENST00000496896 MYL6P60660 151 aa3.31□□□□□ -1.88
TRIM4-205ENST00000496896 CNTN2Q02246 1040 aa3.31□□□□□ -1.88
TRIM4-205ENST00000496896 CACNG1Q06432 222 aa3.31□□□□□ -1.88
TRIM4-205ENST00000496896 ACSM1Q08AH1 577 aa3.31□□□□□ -1.88
TRIM4-205ENST00000496896 FCHO2Q0JRZ9 810 aa3.31□□□□□ -1.88
TRIM4-205ENST00000496896 WASHC5Q12768 1159 aa3.31□□□□□ -1.88
TRIM4-205ENST00000496896 CUL2Q13617 745 aa3.31□□□□□ -1.88
TRIM4-205ENST00000496896 TFDP2Q14188 446 aa3.31□□□□□ -1.88
TRIM4-205ENST00000496896 TMED2Q15363 201 aa3.31□□□□□ -1.88
TRIM4-205ENST00000496896 TAZQ16635 292 aa3.31□□□□□ -1.88
TRIM4-205ENST00000496896 HSP90AA5PQ58FG0 334 aa3.31□□□□□ -1.88
TRIM4-205ENST00000496896 FGD3Q5JSP0 725 aa3.31□□□□□ -1.88
TRIM4-205ENST00000496896 LCE3EQ5T5B0 92 aa3.31□□□□□ -1.88
TRIM4-205ENST00000496896 SEL1L3Q68CR1 1132 aa3.31□□□□□ -1.88
TRIM4-205ENST00000496896 LRRC74BQ6ZQY2 392 aa3.31□□□□□ -1.88
TRIM4-205ENST00000496896 OTOAQ7RTW8 1153 aa3.31□□□□□ -1.88
TRIM4-205ENST00000496896 ST13P4Q8IZP2 240 aaPredicted RBP3.31□□□□□ -1.88
TRIM4-205ENST00000496896 NME8Q8N427 588 aa3.31□□□□□ -1.88
TRIM4-205ENST00000496896 BANPQ8N9N5 519 aa3.31□□□□□ -1.88
TRIM4-205ENST00000496896 TMEM35BQ8NCS4 154 aa3.31□□□□□ -1.88
TRIM4-205ENST00000496896 TMEM161BQ8NDZ6 487 aa3.31□□□□□ -1.88
TRIM4-205ENST00000496896 CATSPER1Q8NEC5 780 aa3.31□□□□□ -1.88
TRIM4-205ENST00000496896 GDAP1Q8TB36 358 aa3.31□□□□□ -1.88
TRIM4-205ENST00000496896 CCDC110Q8TBZ0 833 aa3.31□□□□□ -1.88
TRIM4-205ENST00000496896 MGARPQ8TDB4 240 aa3.31□□□□□ -1.88
TRIM4-205ENST00000496896 ACMSDQ8TDX5 336 aa3.31□□□□□ -1.88
TRIM4-205ENST00000496896 PYROXD1Q8WU10 500 aa3.31□□□□□ -1.88
TRIM4-205ENST00000496896 C1orf54Q8WWF1 131 aa3.31□□□□□ -1.88
TRIM4-205ENST00000496896 SEPT1Q8WYJ6 367 aa3.31□□□□□ -1.88
TRIM4-205ENST00000496896 HAUS1Q96CS2 278 aa3.31□□□□□ -1.88
TRIM4-205ENST00000496896 TSSK1BQ9BXA7 367 aa3.31□□□□□ -1.88
TRIM4-205ENST00000496896 GCOM2Q9BZD3 368 aaPredicted RBP3.31□□□□□ -1.88
TRIM4-205ENST00000496896 IQCGQ9H095 443 aaKnown RBP3.31□□□□□ -1.88
TRIM4-205ENST00000496896 Q9H521 79 aa3.31□□□□□ -1.88
TRIM4-205ENST00000496896 DHX33Q9H6R0 707 aaKnown RBP3.31□□□□□ -1.88
TRIM4-205ENST00000496896 RAVER2Q9HCJ3 691 aaKnown RBP3.31□□□□□ -1.88
TRIM4-205ENST00000496896 POLD4Q9HCU8 107 aa3.31□□□□□ -1.88
TRIM4-205ENST00000496896 GPR83Q9NYM4 423 aa3.31□□□□□ -1.88
TRIM4-205ENST00000496896 CIDEBQ9UHD4 219 aa3.31□□□□□ -1.88
TRIM4-205ENST00000496896 FBXL4Q9UKA2 621 aa3.31□□□□□ -1.88
TRIM4-205ENST00000496896 UBIAD1Q9Y5Z9 338 aa3.31□□□□□ -1.88
TRIM4-205ENST00000496896 IKBKGQ9Y6K9 419 aa3.31□□□□□ -1.88
TRIM4-205ENST00000496896 COMMD3-BMI1R4GMX3 469 aa3.31□□□□□ -1.88
TRIM4-205ENST00000496896 IGLV3-10A0A075B6K4 115 aa3.3□□□□□ -1.88
TRIM4-205ENST00000496896 hCG_1818297A0A087WSY0 165 aa3.3□□□□□ -1.88
TRIM4-205ENST00000496896 IGHV3-38A0A0C4DH36 116 aa3.3□□□□□ -1.88
TRIM4-205ENST00000496896 GOLGA8QA0A0J9YX86 632 aa3.3□□□□□ -1.88
TRIM4-205ENST00000496896 GOLGA8OA6NCC3 632 aa3.3□□□□□ -1.88
TRIM4-205ENST00000496896 NKX6-3A6NJ46 265 aa3.3□□□□□ -1.88
TRIM4-205ENST00000496896 SIGLEC16A6NMB1 481 aa3.3□□□□□ -1.88
TRIM4-205ENST00000496896 KBTBD13C9JR72 458 aa3.3□□□□□ -1.88
TRIM4-205ENST00000496896 ANKRD63C9JTQ0 380 aa3.3□□□□□ -1.88
TRIM4-205ENST00000496896 SPECC1L-ADORA2AF8WAN1 911 aa3.3□□□□□ -1.88
TRIM4-205ENST00000496896 GOLGA8NF8WBI6 632 aa3.3□□□□□ -1.88
TRIM4-205ENST00000496896 H0YJX3 145 aa3.3□□□□□ -1.88
TRIM4-205ENST00000496896 APOC4-APOC2K7ER74 178 aa3.3□□□□□ -1.88
TRIM4-205ENST00000496896 MCF2LO15068 1137 aa3.3□□□□□ -1.88
TRIM4-205ENST00000496896 WDR46O15213 610 aaKnown RBP3.3□□□□□ -1.88
TRIM4-205ENST00000496896 CHMP2AO43633 222 aa3.3□□□□□ -1.88
TRIM4-205ENST00000496896 TOM1O60784 492 aa3.3□□□□□ -1.88
TRIM4-205ENST00000496896 TM7SF2O76062 418 aa3.3□□□□□ -1.88
TRIM4-205ENST00000496896 KLHL2O95198 593 aa3.3□□□□□ -1.88
TRIM4-205ENST00000496896 PSMG1O95456 288 aa3.3□□□□□ -1.88
TRIM4-205ENST00000496896 GSRP00390 522 aa3.3□□□□□ -1.88
TRIM4-205ENST00000496896 GH1P01241 217 aa3.3□□□□□ -1.88
TRIM4-205ENST00000496896 APOC2P02655 101 aa3.3□□□□□ -1.88
TRIM4-205ENST00000496896 MT-ND3P03897 115 aa3.3□□□□□ -1.88
TRIM4-205ENST00000496896 ADRB2P07550 413 aa3.3□□□□□ -1.88
TRIM4-205ENST00000496896 SERPINA6P08185 405 aa3.3□□□□□ -1.88
TRIM4-205ENST00000496896 ASNSP08243 561 aa3.3□□□□□ -1.88
TRIM4-205ENST00000496896 SNRPAP09012 282 aaKnown RBP3.3□□□□□ -1.88
TRIM4-205ENST00000496896 AOC1P19801 751 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms