RNA–Protein interactions for RNA: ENST00000496840.1

TARDBP-210, Transcript of TAR DNA binding protein, humanhuman

TSL 3

Gene TARDBP, Length 692 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-210ENST00000496840 IGHV1-2P23083 117 aa3.81□□□□□ -1.8
TARDBP-210ENST00000496840 NSFP46459 744 aaKnown RBP3.81□□□□□ -1.8
TARDBP-210ENST00000496840 TRPC1P48995 793 aa3.81□□□□□ -1.8
TARDBP-210ENST00000496840 HNRNPFP52597 415 aaKnown RBP3.81□□□□□ -1.8
TARDBP-210ENST00000496840 METAP1P53582 386 aa3.81□□□□□ -1.8
TARDBP-210ENST00000496840 SMC1AQ14683 1233 aaKnown RBP3.81□□□□□ -1.8
TARDBP-210ENST00000496840 NKAIN2Q5VXU1 208 aa3.81□□□□□ -1.8
TARDBP-210ENST00000496840 CADM2Q8N3J6 435 aa3.81□□□□□ -1.8
TARDBP-210ENST00000496840 RNF175Q8N4F7 328 aa3.81□□□□□ -1.8
TARDBP-210ENST00000496840 NEK11Q8NG66 645 aa3.81□□□□□ -1.8
TARDBP-210ENST00000496840 P3H4Q92791 437 aa3.81□□□□□ -1.8
TARDBP-210ENST00000496840 RAB39BQ96DA2 213 aa3.81□□□□□ -1.8
TARDBP-210ENST00000496840 EBF4Q9BQW3 602 aa3.81□□□□□ -1.8
TARDBP-210ENST00000496840 SPXQ9BT56 116 aa3.81□□□□□ -1.8
TARDBP-210ENST00000496840 SYTL2Q9HCH5 934 aa3.81□□□□□ -1.8
TARDBP-210ENST00000496840 A0A0U1RQG5 324 aaPredicted RBP3.8□□□□□ -1.8
TARDBP-210ENST00000496840 ARPC1BO15143 372 aaKnown RBP3.8□□□□□ -1.8
TARDBP-210ENST00000496840 ATP6V1G1O75348 118 aa3.8□□□□□ -1.8
TARDBP-210ENST00000496840 ALPPP05187 535 aa3.8□□□□□ -1.8
TARDBP-210ENST00000496840 ALPPL2P10696 532 aa3.8□□□□□ -1.8
TARDBP-210ENST00000496840 RPA1P27694 616 aa3.8□□□□□ -1.8
TARDBP-210ENST00000496840 CCL11P51671 97 aa3.8□□□□□ -1.8
TARDBP-210ENST00000496840 PPP1R8Q12972 351 aaKnown RBP3.8□□□□□ -1.8
TARDBP-210ENST00000496840 PSG7Q13046 419 aa3.8□□□□□ -1.8
TARDBP-210ENST00000496840 SLC22A16Q86VW1 577 aa3.8□□□□□ -1.8
TARDBP-210ENST00000496840 CHCHD4Q8N4Q1 142 aa3.8□□□□□ -1.8
TARDBP-210ENST00000496840 GPATCH11Q8N954 259 aa3.8□□□□□ -1.8
TARDBP-210ENST00000496840 CCDC47Q96A33 483 aaKnown RBP3.8□□□□□ -1.8
TARDBP-210ENST00000496840 TRPV6Q9H1D0 765 aa3.8□□□□□ -1.8
TARDBP-210ENST00000496840 ABCG8Q9H221 673 aa3.8□□□□□ -1.8
TARDBP-210ENST00000496840 NDUFA13Q9P0J0 144 aa3.8□□□□□ -1.8
TARDBP-210ENST00000496840 ERVK-18Q9QC07 812 aa3.8□□□□□ -1.8
TARDBP-210ENST00000496840 DNPEPQ9ULA0 475 aa3.8□□□□□ -1.8
TARDBP-210ENST00000496840 STRAPQ9Y3F4 350 aaKnown RBP3.8□□□□□ -1.8
TARDBP-210ENST00000496840 RPGRIP1LQ68CZ1 1315 aa3.79□□□□□ -1.8
TARDBP-210ENST00000496840 A0A0U1RRA0 63 aa3.79□□□□□ -1.8
TARDBP-210ENST00000496840 PDLIM1O00151 329 aa3.79□□□□□ -1.8
TARDBP-210ENST00000496840 EMC8O43402 210 aa3.79□□□□□ -1.8
TARDBP-210ENST00000496840 RANBP6O60518 1105 aaKnown RBP3.79□□□□□ -1.8
TARDBP-210ENST00000496840 SEC22BO75396 215 aa3.79□□□□□ -1.8
TARDBP-210ENST00000496840 ZNF18P17022 549 aa3.79□□□□□ -1.8
TARDBP-210ENST00000496840 DIO3P55073 304 aa3.79□□□□□ -1.8
TARDBP-210ENST00000496840 CCZ1BP86790 482 aa3.79□□□□□ -1.8
TARDBP-210ENST00000496840 CCZ1P86791 482 aaPredicted RBP3.79□□□□□ -1.8
TARDBP-210ENST00000496840 SBK1Q52WX2 424 aa3.79□□□□□ -1.8
TARDBP-210ENST00000496840 GPAT3Q53EU6 434 aa3.79□□□□□ -1.8
TARDBP-210ENST00000496840 PARP10Q53GL7 1025 aa3.79□□□□□ -1.8
TARDBP-210ENST00000496840 MOB1BQ7L9L4 216 aa3.79□□□□□ -1.8
TARDBP-210ENST00000496840 BATF2Q8N1L9 274 aa3.79□□□□□ -1.8
TARDBP-210ENST00000496840 CCNYQ8ND76 341 aa3.79□□□□□ -1.8
TARDBP-210ENST00000496840 ACCSQ96QU6 501 aa3.79□□□□□ -1.8
TARDBP-210ENST00000496840 ZNF184Q99676 751 aaPredicted RBP3.79□□□□□ -1.8
TARDBP-210ENST00000496840 XPO4Q9C0E2 1151 aaKnown RBP3.79□□□□□ -1.8
TARDBP-210ENST00000496840 SIRPDQ9H106 197 aa3.79□□□□□ -1.8
TARDBP-210ENST00000496840 TMEM89A2RUT3 159 aa3.78□□□□□ -1.8
TARDBP-210ENST00000496840 C11orf98E9PRG8 122 aa3.78□□□□□ -1.8
TARDBP-210ENST00000496840 EEF2KO00418 725 aaKnown RBP3.78□□□□□ -1.8
TARDBP-210ENST00000496840 ECDO95905 644 aaPredicted RBP3.78□□□□□ -1.8
TARDBP-210ENST00000496840 GHRP10912 638 aa3.78□□□□□ -1.8
TARDBP-210ENST00000496840 MARCKSP29966 332 aaPredicted RBP3.78□□□□□ -1.8
TARDBP-210ENST00000496840 SFNP31947 248 aa3.78□□□□□ -1.8
TARDBP-210ENST00000496840 NLRP11P59045 1033 aaKnown RBP3.78□□□□□ -1.8
TARDBP-210ENST00000496840 PDK1Q15118 436 aa3.78□□□□□ -1.8
TARDBP-210ENST00000496840 PRR4Q16378 134 aa3.78□□□□□ -1.8
TARDBP-210ENST00000496840 ZNF658BQ4V348 819 aaPredicted RBP3.78□□□□□ -1.8
TARDBP-210ENST00000496840 BNIPLQ7Z465 357 aa3.78□□□□□ -1.8
TARDBP-210ENST00000496840 TGIF2LYQ8IUE0 185 aa3.78□□□□□ -1.8
TARDBP-210ENST00000496840 PYROXD2Q8N2H3 581 aa3.78□□□□□ -1.8
TARDBP-210ENST00000496840 UBE2Q2Q8WVN8 375 aa3.78□□□□□ -1.8
TARDBP-210ENST00000496840 LHX4Q969G2 390 aa3.78□□□□□ -1.8
TARDBP-210ENST00000496840 TMEM186Q96B77 213 aa3.78□□□□□ -1.8
TARDBP-210ENST00000496840 DDX47Q9H0S4 455 aaKnown RBP3.78□□□□□ -1.8
TARDBP-210ENST00000496840 ABCG4Q9H172 646 aa3.78□□□□□ -1.8
TARDBP-210ENST00000496840 EHD1Q9H4M9 534 aa3.78□□□□□ -1.8
TARDBP-210ENST00000496840 EXOSC3Q9NQT5 275 aaKnown RBP3.78□□□□□ -1.8
TARDBP-210ENST00000496840 KCNN3Q9UGI6 736 aa3.78□□□□□ -1.8
TARDBP-210ENST00000496840 SLC2A6Q9UGQ3 507 aa3.78□□□□□ -1.8
TARDBP-210ENST00000496840 FAM153AQ9UHL3 310 aa3.78□□□□□ -1.8
TARDBP-210ENST00000496840 PTPRUQ92729 1446 aa3.78□□□□□ -1.8
TARDBP-210ENST00000496840 NME2P1O60361 137 aa3.77□□□□□ -1.81
TARDBP-210ENST00000496840 HSF2BPO75031 334 aa3.77□□□□□ -1.81
TARDBP-210ENST00000496840 PGK2P07205 417 aa3.77□□□□□ -1.81
TARDBP-210ENST00000496840 APRTP07741 180 aa3.77□□□□□ -1.81
TARDBP-210ENST00000496840 WASHC5Q12768 1159 aa3.77□□□□□ -1.81
TARDBP-210ENST00000496840 KYAT1Q16773 422 aa3.77□□□□□ -1.81
TARDBP-210ENST00000496840 ZNF528Q3MIS6 628 aa3.77□□□□□ -1.81
TARDBP-210ENST00000496840 CCDC14Q49A88 953 aa3.77□□□□□ -1.81
TARDBP-210ENST00000496840 LGSNQ5TDP6 509 aa3.77□□□□□ -1.81
TARDBP-210ENST00000496840 HIST2H2AA3Q6FI13 130 aa3.77□□□□□ -1.81
TARDBP-210ENST00000496840 NEK5Q6P3R8 708 aa3.77□□□□□ -1.81
TARDBP-210ENST00000496840 CNSTQ6PJW8 725 aa3.77□□□□□ -1.81
TARDBP-210ENST00000496840 WDR88Q6ZMY6 472 aa3.77□□□□□ -1.81
TARDBP-210ENST00000496840 ENTHD1Q8IYW4 607 aa3.77□□□□□ -1.81
TARDBP-210ENST00000496840 MRPL43Q8N983 215 aaKnown RBP3.77□□□□□ -1.81
TARDBP-210ENST00000496840 NINJ2Q9NZG7 142 aa3.77□□□□□ -1.81
TARDBP-210ENST00000496840 SPASTQ9UBP0 616 aa3.77□□□□□ -1.81
TARDBP-210ENST00000496840 COPS7AQ9UBW8 275 aa3.77□□□□□ -1.81
TARDBP-210ENST00000496840 KLHDC2Q9Y2U9 406 aa3.77□□□□□ -1.81
TARDBP-210ENST00000496840 TRIM49D1C9J1S8 452 aa3.76□□□□□ -1.81
TARDBP-210ENST00000496840 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms