RNA–Protein interactions for RNA: ENST00000496567.5

C9orf3-222, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,575 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-222ENST00000496567 A8MVJ9 347 aa20.08■□□□□ 0.8
C9orf3-222ENST00000496567 PSME3P61289 254 aa20.08■□□□□ 0.8
C9orf3-222ENST00000496567 MRPS22P82650 360 aaKnown RBP20.08■□□□□ 0.8
C9orf3-222ENST00000496567 SELPLGQ14242 412 aa20.08■□□□□ 0.8
C9orf3-222ENST00000496567 C16orf62Q7Z3J2 963 aa20.08■□□□□ 0.8
C9orf3-222ENST00000496567 OR4N2Q8NGD1 307 aa20.08■□□□□ 0.8
C9orf3-222ENST00000496567 RAB8BQ92930 207 aa20.08■□□□□ 0.8
C9orf3-222ENST00000496567 RMND5BQ96G75 393 aaPredicted RBP20.08■□□□□ 0.8
C9orf3-222ENST00000496567 ECSITQ9BQ95 431 aa20.08■□□□□ 0.8
C9orf3-222ENST00000496567 ARHGAP9Q9BRR9 750 aa20.08■□□□□ 0.8
C9orf3-222ENST00000496567 KAT8Q9H7Z6 458 aaKnown RBP20.08■□□□□ 0.8
C9orf3-222ENST00000496567 LIPT1Q9Y234 373 aa20.08■□□□□ 0.8
C9orf3-222ENST00000496567 PCDHGB7Q9Y5F8 929 aa20.08■□□□□ 0.8
C9orf3-222ENST00000496567 GXYLT2A0PJZ3 443 aa20.07■□□□□ 0.8
C9orf3-222ENST00000496567 TMEM247A6NEH6 219 aa20.07■□□□□ 0.8
C9orf3-222ENST00000496567 HNRNPCL1O60812 293 aaKnown RBP20.07■□□□□ 0.8
C9orf3-222ENST00000496567 ATP5HO75947 161 aa20.07■□□□□ 0.8
C9orf3-222ENST00000496567 FBXO45P0C2W1 286 aa20.07■□□□□ 0.8
C9orf3-222ENST00000496567 BMP2P12643 396 aa20.07■□□□□ 0.8
C9orf3-222ENST00000496567 CASRP41180 1078 aa20.07■□□□□ 0.8
C9orf3-222ENST00000496567 RHDQ02161 417 aa20.07■□□□□ 0.8
C9orf3-222ENST00000496567 BNIP1Q12981 228 aa20.07■□□□□ 0.8
C9orf3-222ENST00000496567 RABL3Q5HYI8 236 aa20.07■□□□□ 0.8
C9orf3-222ENST00000496567 C19orf48Q6RUI8 117 aa20.07■□□□□ 0.8
C9orf3-222ENST00000496567 GPALPP1Q8IXQ4 340 aa20.07■□□□□ 0.8
C9orf3-222ENST00000496567 PGAM4Q8N0Y7 254 aa20.07■□□□□ 0.8
C9orf3-222ENST00000496567 BCORP1Q8N888 145 aa20.07■□□□□ 0.8
C9orf3-222ENST00000496567 TMBIM1Q969X1 311 aa20.07■□□□□ 0.8
C9orf3-222ENST00000496567 OMA1Q96E52 524 aa20.07■□□□□ 0.8
C9orf3-222ENST00000496567 G6PC3Q9BUM1 346 aa20.07■□□□□ 0.8
C9orf3-222ENST00000496567 TRIM8Q9BZR9 551 aa20.07■□□□□ 0.8
C9orf3-222ENST00000496567 RNF32Q9H0A6 362 aa20.07■□□□□ 0.8
C9orf3-222ENST00000496567 C1orf21Q9H246 121 aa20.07■□□□□ 0.8
C9orf3-222ENST00000496567 P2RX2Q9UBL9 471 aa20.07■□□□□ 0.8
C9orf3-222ENST00000496567 KCNE3Q9Y6H6 103 aa20.07■□□□□ 0.8
C9orf3-222ENST00000496567 ZNF354AO60765 605 aaPredicted RBP20.06■□□□□ 0.8
C9orf3-222ENST00000496567 ABCB7O75027 752 aa20.06■□□□□ 0.8
C9orf3-222ENST00000496567 REM1O75628 298 aa20.06■□□□□ 0.8
C9orf3-222ENST00000496567 KCNK2O95069 426 aa20.06■□□□□ 0.8
C9orf3-222ENST00000496567 IL12BP29460 328 aa20.06■□□□□ 0.8
C9orf3-222ENST00000496567 SOX3P41225 446 aa20.06■□□□□ 0.8
C9orf3-222ENST00000496567 HLCSP50747 726 aa20.06■□□□□ 0.8
C9orf3-222ENST00000496567 SLC25A3Q00325 362 aa20.06■□□□□ 0.8
C9orf3-222ENST00000496567 ARHGAP11BQ3KRB8 267 aa20.06■□□□□ 0.8
C9orf3-222ENST00000496567 DCST2Q5T1A1 773 aa20.06■□□□□ 0.8
C9orf3-222ENST00000496567 HEPHL1Q6MZM0 1159 aa20.06■□□□□ 0.8
C9orf3-222ENST00000496567 IGFL2Q6UWQ7 119 aa20.06■□□□□ 0.8
C9orf3-222ENST00000496567 SERPINA11Q86U17 422 aa20.06■□□□□ 0.8
C9orf3-222ENST00000496567 PRR22Q8IZ63 422 aa20.06■□□□□ 0.8
C9orf3-222ENST00000496567 RBM15BQ8NDT2 890 aaKnown RBP20.06■□□□□ 0.8
C9orf3-222ENST00000496567 CHDHQ8NE62 594 aaPredicted RBP20.06■□□□□ 0.8
C9orf3-222ENST00000496567 FBXO27Q8NI29 283 aa20.06■□□□□ 0.8
C9orf3-222ENST00000496567 TM9SF4Q92544 642 aa20.06■□□□□ 0.8
C9orf3-222ENST00000496567 TMEM125Q96AQ2 219 aa20.06■□□□□ 0.8
C9orf3-222ENST00000496567 SPACA9Q96E40 222 aaPredicted RBP20.06■□□□□ 0.8
C9orf3-222ENST00000496567 UTP23Q9BRU9 249 aaKnown RBP20.06■□□□□ 0.8
C9orf3-222ENST00000496567 SPATA9Q9BWV2 254 aa20.06■□□□□ 0.8
C9orf3-222ENST00000496567 SPAG4Q9NPE6 437 aa20.06■□□□□ 0.8
C9orf3-222ENST00000496567 HPF1Q9NWY4 346 aa20.06■□□□□ 0.8
C9orf3-222ENST00000496567 CPAMD8Q8IZJ3 1885 aa20.06■□□□□ 0.8
C9orf3-222ENST00000496567 LOC400499M0QZD8 3231 aa20.05■□□□□ 0.8
C9orf3-222ENST00000496567 TNFRSF21O75509 655 aa20.05■□□□□ 0.8
C9orf3-222ENST00000496567 PPM1BO75688 479 aa20.05■□□□□ 0.8
C9orf3-222ENST00000496567 IL33O95760 270 aa20.05■□□□□ 0.8
C9orf3-222ENST00000496567 CYB561P49447 251 aa20.05■□□□□ 0.8
C9orf3-222ENST00000496567 SLC7A2P52569 658 aa20.05■□□□□ 0.8
C9orf3-222ENST00000496567 PNLIPRP2P54317 469 aa20.05■□□□□ 0.8
C9orf3-222ENST00000496567 GNA13Q14344 377 aa20.05■□□□□ 0.8
C9orf3-222ENST00000496567 CYP51A1Q16850 503 aa20.05■□□□□ 0.8
C9orf3-222ENST00000496567 COL28A1Q2UY09 1125 aa20.05■□□□□ 0.8
C9orf3-222ENST00000496567 GCNT6Q5T4J0 391 aa20.05■□□□□ 0.8
C9orf3-222ENST00000496567 LYPD8Q6UX82 237 aa20.05■□□□□ 0.8
C9orf3-222ENST00000496567 SLC15A3Q8IY34 581 aa20.05■□□□□ 0.8
C9orf3-222ENST00000496567 OR10A6Q8NH74 314 aa20.05■□□□□ 0.8
C9orf3-222ENST00000496567 FAM110BQ8TC76 370 aa20.05■□□□□ 0.8
C9orf3-222ENST00000496567 DIO2Q92813 273 aa20.05■□□□□ 0.8
C9orf3-222ENST00000496567 ZNF451Q9Y4E5 1061 aa20.05■□□□□ 0.8
C9orf3-222ENST00000496567 OR6C70A6NIJ9 312 aa20.04■□□□□ 0.8
C9orf3-222ENST00000496567 TSPAN2O60636 221 aa20.04■□□□□ 0.8
C9orf3-222ENST00000496567 OR6B1O95007 311 aa20.04■□□□□ 0.8
C9orf3-222ENST00000496567 WDPCPO95876 746 aa20.04■□□□□ 0.8
C9orf3-222ENST00000496567 NR2F1P10589 423 aa20.04■□□□□ 0.8
C9orf3-222ENST00000496567 CPOXP36551 454 aa20.04■□□□□ 0.8
C9orf3-222ENST00000496567 RFX3P48380 749 aa20.04■□□□□ 0.8
C9orf3-222ENST00000496567 RASSF2P50749 326 aa20.04■□□□□ 0.8
C9orf3-222ENST00000496567 OC90Q02509 493 aaPredicted RBP20.04■□□□□ 0.8
C9orf3-222ENST00000496567 NTRK2Q16620 822 aa20.04■□□□□ 0.8
C9orf3-222ENST00000496567 CPEB4Q17RY0 729 aaKnown RBP eCLIP20.04■□□□□ 0.8
C9orf3-222ENST00000496567 ZNF791Q3KP31 576 aaPredicted RBP20.04■□□□□ 0.8
C9orf3-222ENST00000496567 FIGNL1Q6PIW4 674 aa20.04■□□□□ 0.8
C9orf3-222ENST00000496567 IL20RBQ6UXL0 311 aa20.04■□□□□ 0.8
C9orf3-222ENST00000496567 RINLQ6ZS11 566 aa20.04■□□□□ 0.8
C9orf3-222ENST00000496567 CCDC121Q6ZUS5 278 aa20.04■□□□□ 0.8
C9orf3-222ENST00000496567 HAS2Q92819 552 aa20.04■□□□□ 0.8
C9orf3-222ENST00000496567 COL21A1Q96P44 957 aa20.04■□□□□ 0.8
C9orf3-222ENST00000496567 TRNT1Q96Q11 434 aaKnown RBP20.04■□□□□ 0.8
C9orf3-222ENST00000496567 ADNPQ9H2P0 1102 aa20.04■□□□□ 0.8
C9orf3-222ENST00000496567 TMEM38AQ9H6F2 299 aa20.04■□□□□ 0.8
C9orf3-222ENST00000496567 TRIM45Q9H8W5 580 aaPredicted RBP20.04■□□□□ 0.8
C9orf3-222ENST00000496567 ZBTB20Q9HC78 741 aaPredicted RBP20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms