RNA–Protein interactions for RNA: ENST00000496116.1

CMSS1-208, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 1 (best)

Gene CMSS1, Length 2,145 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-208ENST00000496116 WDR53Q7Z5U6 358 aaPredicted RBP10.37□□□□□ -0.75
CMSS1-208ENST00000496116 BCDIN3DQ7Z5W3 292 aaKnown RBP10.37□□□□□ -0.75
CMSS1-208ENST00000496116 CYP4Z2PQ8N1L4 340 aa10.37□□□□□ -0.75
CMSS1-208ENST00000496116 OR2L13Q8N349 312 aa10.37□□□□□ -0.75
CMSS1-208ENST00000496116 SLC16A11Q8NCK7 471 aa10.37□□□□□ -0.75
CMSS1-208ENST00000496116 TOR1AIP2Q8NFQ8 470 aa10.37□□□□□ -0.75
CMSS1-208ENST00000496116 TMEM163Q8TC26 289 aa10.37□□□□□ -0.75
CMSS1-208ENST00000496116 DIO2Q92813 273 aa10.37□□□□□ -0.75
CMSS1-208ENST00000496116 ZG16BQ96DA0 208 aa10.37□□□□□ -0.75
CMSS1-208ENST00000496116 ZNF582Q96NG8 517 aaPredicted RBP10.37□□□□□ -0.75
CMSS1-208ENST00000496116 GPA33Q99795 319 aa10.37□□□□□ -0.75
CMSS1-208ENST00000496116 ZFYVE21Q9BQ24 234 aa10.37□□□□□ -0.75
CMSS1-208ENST00000496116 HHATLQ9HCP6 504 aa10.37□□□□□ -0.75
CMSS1-208ENST00000496116 EXOSC4Q9NPD3 245 aaKnown RBP10.37□□□□□ -0.75
CMSS1-208ENST00000496116 KRCC1Q9NPI7 259 aaPredicted RBP10.37□□□□□ -0.75
CMSS1-208ENST00000496116 SEMA4GQ9NTN9 838 aa10.37□□□□□ -0.75
CMSS1-208ENST00000496116 CHCHD3Q9NX63 227 aaKnown RBP10.37□□□□□ -0.75
CMSS1-208ENST00000496116 KCMF1Q9P0J7 381 aa10.37□□□□□ -0.75
CMSS1-208ENST00000496116 CRNNQ9UBG3 495 aaPredicted RBP10.37□□□□□ -0.75
CMSS1-208ENST00000496116 KLHL3Q9UH77 587 aa10.37□□□□□ -0.75
CMSS1-208ENST00000496116 WDR45Q9Y484 360 aa10.37□□□□□ -0.75
CMSS1-208ENST00000496116 UGT2A1Q9Y4X1 527 aa10.37□□□□□ -0.75
CMSS1-208ENST00000496116 ENTPD2Q9Y5L3 495 aa10.37□□□□□ -0.75
CMSS1-208ENST00000496116 C2orf74A8MZ97 194 aa10.36□□□□□ -0.75
CMSS1-208ENST00000496116 PRODHO43272 600 aa10.36□□□□□ -0.75
CMSS1-208ENST00000496116 FRS3O43559 492 aa10.36□□□□□ -0.75
CMSS1-208ENST00000496116 FCMRO60667 390 aa10.36□□□□□ -0.75
CMSS1-208ENST00000496116 CTSVO60911 334 aa10.36□□□□□ -0.75
CMSS1-208ENST00000496116 NDUFV2P19404 249 aa10.36□□□□□ -0.75
CMSS1-208ENST00000496116 SOX3P41225 446 aa10.36□□□□□ -0.75
CMSS1-208ENST00000496116 SIM1P81133 766 aaPredicted RBP10.36□□□□□ -0.75
CMSS1-208ENST00000496116 LSM11P83369 360 aaKnown RBP eCLIP10.36□□□□□ -0.75
CMSS1-208ENST00000496116 EFNB1P98172 346 aa10.36□□□□□ -0.75
CMSS1-208ENST00000496116 DLX2Q07687 328 aaPredicted RBP10.36□□□□□ -0.75
CMSS1-208ENST00000496116 RAB40BQ12829 278 aa10.36□□□□□ -0.75
CMSS1-208ENST00000496116 ARHGAP11BQ3KRB8 267 aa10.36□□□□□ -0.75
CMSS1-208ENST00000496116 EIPR1Q53HC9 387 aa10.36□□□□□ -0.75
CMSS1-208ENST00000496116 SPANXN2Q5MJ10 180 aa10.36□□□□□ -0.75
CMSS1-208ENST00000496116 FCRL6Q6DN72 434 aa10.36□□□□□ -0.75
CMSS1-208ENST00000496116 FRRS1Q6ZNA5 592 aa10.36□□□□□ -0.75
CMSS1-208ENST00000496116 PRICKLE2Q7Z3G6 844 aa10.36□□□□□ -0.75
CMSS1-208ENST00000496116 KIF18BQ86Y91 864 aa10.36□□□□□ -0.75
CMSS1-208ENST00000496116 OR52I1Q8NGK6 324 aa10.36□□□□□ -0.75
CMSS1-208ENST00000496116 ACOT11Q8WXI4 607 aaPredicted RBP10.36□□□□□ -0.75
CMSS1-208ENST00000496116 CDS1Q92903 461 aa10.36□□□□□ -0.75
CMSS1-208ENST00000496116 PLA2G12AQ9BZM1 189 aa10.36□□□□□ -0.75
CMSS1-208ENST00000496116 MCOLN1Q9GZU1 580 aa10.36□□□□□ -0.75
CMSS1-208ENST00000496116 TWSG1Q9GZX9 223 aa10.36□□□□□ -0.75
CMSS1-208ENST00000496116 SAP130Q9H0E3 1048 aa10.36□□□□□ -0.75
CMSS1-208ENST00000496116 C6orf106Q9H6K1 298 aaPredicted RBP10.36□□□□□ -0.75
CMSS1-208ENST00000496116 EGLN3Q9H6Z9 239 aa10.36□□□□□ -0.75
CMSS1-208ENST00000496116 C8orf33Q9H7E9 229 aaPredicted RBP10.36□□□□□ -0.75
CMSS1-208ENST00000496116 SP140LQ9H930 580 aa10.36□□□□□ -0.75
CMSS1-208ENST00000496116 LYRM4Q9HD34 91 aa10.36□□□□□ -0.75
CMSS1-208ENST00000496116 CD93Q9NPY3 652 aa10.36□□□□□ -0.75
CMSS1-208ENST00000496116 ABCB10Q9NRK6 738 aa10.36□□□□□ -0.75
CMSS1-208ENST00000496116 POT1Q9NUX5 634 aa10.36□□□□□ -0.75
CMSS1-208ENST00000496116 IRAK4Q9NWZ3 460 aa10.36□□□□□ -0.75
CMSS1-208ENST00000496116 NDUFB11Q9NX14 153 aa10.36□□□□□ -0.75
CMSS1-208ENST00000496116 STUB1Q9UNE7 303 aa10.36□□□□□ -0.75
CMSS1-208ENST00000496116 GPR55Q9Y2T6 319 aaPredicted RBP10.36□□□□□ -0.75
CMSS1-208ENST00000496116 SLC22A7Q9Y694 548 aa10.36□□□□□ -0.75
CMSS1-208ENST00000496116 FANCMQ8IYD8 2048 aa10.36□□□□□ -0.75
CMSS1-208ENST00000496116 FAM221BA6H8Z2 402 aa10.36□□□□□ -0.75
CMSS1-208ENST00000496116 P2RX6O15547 441 aa10.36□□□□□ -0.75
CMSS1-208ENST00000496116 NARSO43776 548 aaKnown RBP10.36□□□□□ -0.75
CMSS1-208ENST00000496116 GPX5O75715 221 aa10.36□□□□□ -0.75
CMSS1-208ENST00000496116 UBXN7O94888 489 aa10.36□□□□□ -0.75
CMSS1-208ENST00000496116 OR5F1O95221 314 aa10.36□□□□□ -0.75
CMSS1-208ENST00000496116 TNFP01375 233 aa10.36□□□□□ -0.75
CMSS1-208ENST00000496116 ACP2P11117 423 aa10.36□□□□□ -0.75
CMSS1-208ENST00000496116 CPMP14384 443 aa10.36□□□□□ -0.75
CMSS1-208ENST00000496116 ALOX12P18054 663 aa10.36□□□□□ -0.75
CMSS1-208ENST00000496116 DNASE1L3Q13609 305 aa10.36□□□□□ -0.75
CMSS1-208ENST00000496116 RUNX2Q13950 521 aa10.36□□□□□ -0.75
CMSS1-208ENST00000496116 DECR1Q16698 335 aa10.36□□□□□ -0.75
CMSS1-208ENST00000496116 ALG11Q2TAA5 492 aa10.36□□□□□ -0.75
CMSS1-208ENST00000496116 PUS10Q3MIT2 529 aaKnown RBP10.36□□□□□ -0.75
CMSS1-208ENST00000496116 C3orf38Q5JPI3 329 aa10.36□□□□□ -0.75
CMSS1-208ENST00000496116 DGLUCYQ7Z3D6 616 aa10.36□□□□□ -0.75
CMSS1-208ENST00000496116 MRGPREQ86SM8 312 aa10.36□□□□□ -0.75
CMSS1-208ENST00000496116 SLC22A16Q86VW1 577 aa10.36□□□□□ -0.75
CMSS1-208ENST00000496116 PARP16Q8N5Y8 322 aa10.36□□□□□ -0.75
CMSS1-208ENST00000496116 RPLP0P6Q8NHW5 317 aa10.36□□□□□ -0.75
CMSS1-208ENST00000496116 RSC1A1Q92681 617 aa10.36□□□□□ -0.75
CMSS1-208ENST00000496116 OSTF1Q92882 214 aa10.36□□□□□ -0.75
CMSS1-208ENST00000496116 FAM46AQ96IP4 442 aaKnown RBP10.36□□□□□ -0.75
CMSS1-208ENST00000496116 CEP19Q96LK0 163 aa10.36□□□□□ -0.75
CMSS1-208ENST00000496116 MCHR1Q99705 422 aa10.36□□□□□ -0.75
CMSS1-208ENST00000496116 CNPPD1Q9BV87 410 aa10.36□□□□□ -0.75
CMSS1-208ENST00000496116 SIAEQ9HAT2 523 aa10.36□□□□□ -0.75
CMSS1-208ENST00000496116 CNIH4Q9P003 139 aa10.36□□□□□ -0.75
CMSS1-208ENST00000496116 TESQ9UGI8 421 aaKnown RBP10.36□□□□□ -0.75
CMSS1-208ENST00000496116 ZNF229Q9UJW7 825 aa10.36□□□□□ -0.75
CMSS1-208ENST00000496116 PILRAQ9UKJ1 303 aa10.36□□□□□ -0.75
CMSS1-208ENST00000496116 SSR3Q9UNL2 185 aa10.36□□□□□ -0.75
CMSS1-208ENST00000496116 ZNF443Q9Y2A4 671 aaPredicted RBP10.36□□□□□ -0.75
CMSS1-208ENST00000496116 CHST2Q9Y4C5 530 aa10.36□□□□□ -0.75
CMSS1-208ENST00000496116 HS3ST3A1Q9Y663 406 aa10.36□□□□□ -0.75
CMSS1-208ENST00000496116 A0A075B6Q4 140 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms