RNA–Protein interactions for RNA: ENST00000496081.5

HLA-A-208, Transcript of major histocompatibility complex, class I, A, humanhuman

Gene HLA-A, Length 1,786 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-208ENST00000496081 QSOX2Q6ZRP7 698 aa15.24■□□□□ 0.03
HLA-A-208ENST00000496081 ATG16L2Q8NAA4 619 aa15.24■□□□□ 0.03
HLA-A-208ENST00000496081 PIK3C3Q8NEB9 887 aa15.24■□□□□ 0.03
HLA-A-208ENST00000496081 PRSS33Q8NF86 280 aa15.24■□□□□ 0.03
HLA-A-208ENST00000496081 RNF31Q96EP0 1072 aa15.24■□□□□ 0.03
HLA-A-208ENST00000496081 ZNF578Q96N58 590 aaPredicted RBP15.24■□□□□ 0.03
HLA-A-208ENST00000496081 MUS81Q96NY9 551 aa15.24■□□□□ 0.03
HLA-A-208ENST00000496081 LMF2Q9BU23 707 aaKnown RBP15.24■□□□□ 0.03
HLA-A-208ENST00000496081 SAP130Q9H0E3 1048 aa15.24■□□□□ 0.03
HLA-A-208ENST00000496081 ZNF696Q9H7X3 374 aa15.24■□□□□ 0.03
HLA-A-208ENST00000496081 FOLH1BQ9HBA9 442 aa15.24■□□□□ 0.03
HLA-A-208ENST00000496081 FBXO34Q9NWN3 711 aa15.24■□□□□ 0.03
HLA-A-208ENST00000496081 SIDT1Q9NXL6 827 aaKnown RBP15.24■□□□□ 0.03
HLA-A-208ENST00000496081 KIF17Q9P2E2 1029 aa15.24■□□□□ 0.03
HLA-A-208ENST00000496081 ERVK-19Q9WJR5 959 aa15.24■□□□□ 0.03
HLA-A-208ENST00000496081 SLC9A8Q9Y2E8 581 aa15.24■□□□□ 0.03
HLA-A-208ENST00000496081 HEMK1Q9Y5R4 338 aaPredicted RBP15.24■□□□□ 0.03
HLA-A-208ENST00000496081 NUP210LQ5VU65 1888 aa15.23■□□□□ 0.03
HLA-A-208ENST00000496081 GXYLT2A0PJZ3 443 aa15.23■□□□□ 0.03
HLA-A-208ENST00000496081 SYT5O00445 386 aa15.23■□□□□ 0.03
HLA-A-208ENST00000496081 PCDH17O14917 1159 aa15.23■□□□□ 0.03
HLA-A-208ENST00000496081 STX11O75558 287 aa15.23■□□□□ 0.03
HLA-A-208ENST00000496081 TIAF1O95411 115 aa15.23■□□□□ 0.03
HLA-A-208ENST00000496081 PRKAR1BP31321 381 aa15.23■□□□□ 0.03
HLA-A-208ENST00000496081 POLR2IP36954 125 aaKnown RBP15.23■□□□□ 0.03
HLA-A-208ENST00000496081 PGDP52209 483 aa15.23■□□□□ 0.03
HLA-A-208ENST00000496081 NUBP1P53384 320 aa15.23■□□□□ 0.03
HLA-A-208ENST00000496081 MINDY4Q4G0A6 757 aa15.23■□□□□ 0.03
HLA-A-208ENST00000496081 PHF19Q5T6S3 580 aa15.23■□□□□ 0.03
HLA-A-208ENST00000496081 TTC23Q5W5X9 447 aa15.23■□□□□ 0.03
HLA-A-208ENST00000496081 DHRS4L2Q6PKH6 230 aa15.23■□□□□ 0.03
HLA-A-208ENST00000496081 ZNF555Q8NEP9 628 aa15.23■□□□□ 0.03
HLA-A-208ENST00000496081 OR10G2Q8NGC3 310 aa15.23■□□□□ 0.03
HLA-A-208ENST00000496081 OR6T1Q8NGN1 323 aa15.23■□□□□ 0.03
HLA-A-208ENST00000496081 PHF10Q8WUB8 498 aaKnown RBP15.23■□□□□ 0.03
HLA-A-208ENST00000496081 TSLPQ969D9 159 aa15.23■□□□□ 0.03
HLA-A-208ENST00000496081 VSTM2LQ96N03 204 aa15.23■□□□□ 0.03
HLA-A-208ENST00000496081 FEVQ99581 238 aa15.23■□□□□ 0.03
HLA-A-208ENST00000496081 CNPPD1Q9BV87 410 aa15.23■□□□□ 0.03
HLA-A-208ENST00000496081 NMNAT1Q9HAN9 279 aaPredicted RBP15.23■□□□□ 0.03
HLA-A-208ENST00000496081 SLC22A11Q9NSA0 550 aa15.23■□□□□ 0.03
HLA-A-208ENST00000496081 ACAD8Q9UKU7 415 aa15.23■□□□□ 0.03
HLA-A-208ENST00000496081 RARRES3Q9UL19 164 aa15.23■□□□□ 0.03
HLA-A-208ENST00000496081 A4GNTQ9UNA3 340 aa15.23■□□□□ 0.03
HLA-A-208ENST00000496081 DTX4Q9Y2E6 619 aa15.23■□□□□ 0.03
HLA-A-208ENST00000496081 GPR179Q6PRD1 2367 aa15.22■□□□□ 0.03
HLA-A-208ENST00000496081 LNP1A1A4G5 178 aa15.22■□□□□ 0.03
HLA-A-208ENST00000496081 D6RAR5 112 aa15.22■□□□□ 0.03
HLA-A-208ENST00000496081 PRAMEF2O60811 474 aa15.22■□□□□ 0.03
HLA-A-208ENST00000496081 AK1P00568 194 aa15.22■□□□□ 0.03
HLA-A-208ENST00000496081 TNNI3P19429 210 aa15.22■□□□□ 0.03
HLA-A-208ENST00000496081 GRK6P43250 576 aa15.22■□□□□ 0.03
HLA-A-208ENST00000496081 POU6F2P78424 691 aaPredicted RBP15.22■□□□□ 0.03
HLA-A-208ENST00000496081 IL1RL1Q01638 556 aa15.22■□□□□ 0.03
HLA-A-208ENST00000496081 RHAGQ02094 409 aa15.22■□□□□ 0.03
HLA-A-208ENST00000496081 GPR68Q15743 365 aa15.22■□□□□ 0.03
HLA-A-208ENST00000496081 NPTX1Q15818 432 aa15.22■□□□□ 0.03
HLA-A-208ENST00000496081 COLEC12Q5KU26 742 aa15.22■□□□□ 0.03
HLA-A-208ENST00000496081 FIGNL1Q6PIW4 674 aa15.22■□□□□ 0.03
HLA-A-208ENST00000496081 ZNF619Q8N2I2 560 aa15.22■□□□□ 0.03
HLA-A-208ENST00000496081 SLC5A8Q8N695 610 aa15.22■□□□□ 0.03
HLA-A-208ENST00000496081 SLC38A9Q8NBW4 561 aa15.22■□□□□ 0.03
HLA-A-208ENST00000496081 PTPMT1Q8WUK0 201 aaPredicted RBP15.22■□□□□ 0.03
HLA-A-208ENST00000496081 ATOH1Q92858 354 aaPredicted RBP15.22■□□□□ 0.03
HLA-A-208ENST00000496081 DHRS1Q96LJ7 313 aa15.22■□□□□ 0.03
HLA-A-208ENST00000496081 SLC7A5P2Q9GIP4 190 aa15.22■□□□□ 0.03
HLA-A-208ENST00000496081 OR10A5Q9H207 317 aa15.22■□□□□ 0.03
HLA-A-208ENST00000496081 TRIM45Q9H8W5 580 aaPredicted RBP15.22■□□□□ 0.03
HLA-A-208ENST00000496081 MKKSQ9NPJ1 570 aaPredicted RBP15.22■□□□□ 0.03
HLA-A-208ENST00000496081 KRT84Q9NSB2 600 aa15.22■□□□□ 0.03
HLA-A-208ENST00000496081 RLIMQ9NVW2 624 aa15.22■□□□□ 0.03
HLA-A-208ENST00000496081 GPR55Q9Y2T6 319 aaPredicted RBP15.22■□□□□ 0.03
HLA-A-208ENST00000496081 IFT52Q9Y366 437 aa15.22■□□□□ 0.03
HLA-A-208ENST00000496081 PCDHGB2Q9Y5G2 931 aa15.22■□□□□ 0.03
HLA-A-208ENST00000496081 CENPVL1A0A0U1RR11 272 aa15.21■□□□□ 0.03
HLA-A-208ENST00000496081 LOC100130705A0A1B0GUX0 176 aa15.21■□□□□ 0.03
HLA-A-208ENST00000496081 AGAP5A6NIR3 686 aa15.21■□□□□ 0.03
HLA-A-208ENST00000496081 C17orf105B2RV13 164 aa15.21■□□□□ 0.03
HLA-A-208ENST00000496081 SLC16A6O15403 523 aa15.21■□□□□ 0.03
HLA-A-208ENST00000496081 SCRG1O75711 98 aa15.21■□□□□ 0.03
HLA-A-208ENST00000496081 SEC24DO94855 1032 aaPredicted RBP15.21■□□□□ 0.03
HLA-A-208ENST00000496081 SOX30O94993 753 aa15.21■□□□□ 0.03
HLA-A-208ENST00000496081 CLPSP04118 112 aa15.21■□□□□ 0.03
HLA-A-208ENST00000496081 TCF15Q12870 199 aa15.21■□□□□ 0.03
HLA-A-208ENST00000496081 PIN1Q13526 163 aaPredicted RBP15.21■□□□□ 0.03
HLA-A-208ENST00000496081 ZNHIT3Q15649 155 aaPredicted RBP15.21■□□□□ 0.03
HLA-A-208ENST00000496081 PWWP2BQ6NUJ5 590 aa15.21■□□□□ 0.03
HLA-A-208ENST00000496081 COX15Q7KZN9 410 aa15.21■□□□□ 0.03
HLA-A-208ENST00000496081 TSPYL5Q86VY4 417 aaPredicted RBP15.21■□□□□ 0.03
HLA-A-208ENST00000496081 PEX5LQ8IYB4 626 aa15.21■□□□□ 0.03
HLA-A-208ENST00000496081 CLIP4Q8N3C7 705 aa15.21■□□□□ 0.03
HLA-A-208ENST00000496081 ZNF615Q8N8J6 731 aa15.21■□□□□ 0.03
HLA-A-208ENST00000496081 ALPK1Q96QP1 1244 aa15.21■□□□□ 0.03
HLA-A-208ENST00000496081 ARHGDIGQ99819 225 aa15.21■□□□□ 0.03
HLA-A-208ENST00000496081 PNO1Q9NRX1 252 aaKnown RBP15.21■□□□□ 0.03
HLA-A-208ENST00000496081 OCIAD1Q9NX40 245 aa15.21■□□□□ 0.03
HLA-A-208ENST00000496081 KCNE5Q9UJ90 142 aa15.21■□□□□ 0.03
HLA-A-208ENST00000496081 ZNF443Q9Y2A4 671 aaPredicted RBP15.21■□□□□ 0.03
HLA-A-208ENST00000496081 TRBV4-1A0A0J9YWV2 114 aa15.21■□□□□ 0.02
HLA-A-208ENST00000496081 TCRBV16S1A1N1A0A5B0 115 aa15.21■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms