RNA–Protein interactions for RNA: ENST00000495835.1

HLA-C-209, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,073 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-209ENST00000495835 MTERF3Q96E29 417 aa22.08■■□□□ 1.13
HLA-C-209ENST00000495835 EGLN2Q96KS0 407 aa22.08■■□□□ 1.13
HLA-C-209ENST00000495835 DDX18Q9NVP1 670 aaKnown RBP22.08■■□□□ 1.13
HLA-C-209ENST00000495835 ZNF629Q9UEG4 869 aaPredicted RBP22.08■■□□□ 1.13
HLA-C-209ENST00000495835 MRTO4Q9UKD2 239 aaKnown RBP22.08■■□□□ 1.13
HLA-C-209ENST00000495835 TRAF6Q9Y4K3 522 aa22.08■■□□□ 1.13
HLA-C-209ENST00000495835 WIF1Q9Y5W5 379 aa22.08■■□□□ 1.13
HLA-C-209ENST00000495835 CD8B2A6NJW9 211 aa22.07■■□□□ 1.12
HLA-C-209ENST00000495835 UPK1AO00322 258 aa22.07■■□□□ 1.12
HLA-C-209ENST00000495835 CPN1P15169 458 aa22.07■■□□□ 1.12
HLA-C-209ENST00000495835 DDX5P17844 614 aaKnown RBP22.07■■□□□ 1.12
HLA-C-209ENST00000495835 SRD5A2P31213 254 aa22.07■■□□□ 1.12
HLA-C-209ENST00000495835 MC3RP41968 323 aa22.07■■□□□ 1.12
HLA-C-209ENST00000495835 ASMTP46597 345 aa22.07■■□□□ 1.12
HLA-C-209ENST00000495835 ZNHIT3Q15649 155 aaPredicted RBP22.07■■□□□ 1.12
HLA-C-209ENST00000495835 UGT3A2Q3SY77 523 aa22.07■■□□□ 1.12
HLA-C-209ENST00000495835 EIPR1Q53HC9 387 aa22.07■■□□□ 1.12
HLA-C-209ENST00000495835 WIPI1Q5MNZ9 446 aaPredicted RBP22.07■■□□□ 1.12
HLA-C-209ENST00000495835 TMEM107Q6UX40 140 aa22.07■■□□□ 1.12
HLA-C-209ENST00000495835 ZPLD1Q8TCW7 415 aa22.07■■□□□ 1.12
HLA-C-209ENST00000495835 TCP10LQ8TDR4 215 aa22.07■■□□□ 1.12
HLA-C-209ENST00000495835 WDYHV1Q96HA8 205 aa22.07■■□□□ 1.12
HLA-C-209ENST00000495835 TUBB1Q9H4B7 451 aa22.07■■□□□ 1.12
HLA-C-209ENST00000495835 REEP4Q9H6H4 257 aa22.07■■□□□ 1.12
HLA-C-209ENST00000495835 CALHM2Q9HA72 323 aa22.07■■□□□ 1.12
HLA-C-209ENST00000495835 MCCC2Q9HCC0 563 aa22.07■■□□□ 1.12
HLA-C-209ENST00000495835 KCNN3Q9UGI6 736 aa22.07■■□□□ 1.12
HLA-C-209ENST00000495835 MAPRE3Q9UPY8 281 aa22.07■■□□□ 1.12
HLA-C-209ENST00000495835 SLC6A5Q9Y345 797 aa22.07■■□□□ 1.12
HLA-C-209ENST00000495835 CSMD2Q7Z408 3487 aa22.07■■□□□ 1.12
HLA-C-209ENST00000495835 LSM1O15116 133 aaKnown RBP22.06■■□□□ 1.12
HLA-C-209ENST00000495835 ZNF500O60304 480 aaPredicted RBP22.06■■□□□ 1.12
HLA-C-209ENST00000495835 IL2RAP01589 272 aa22.06■■□□□ 1.12
HLA-C-209ENST00000495835 TACR1P25103 407 aa22.06■■□□□ 1.12
HLA-C-209ENST00000495835 PSMD4P55036 377 aaKnown RBP22.06■■□□□ 1.12
HLA-C-209ENST00000495835 ZNF155Q12901 538 aaPredicted RBP22.06■■□□□ 1.12
HLA-C-209ENST00000495835 DECR1Q16698 335 aa22.06■■□□□ 1.12
HLA-C-209ENST00000495835 ARL13AQ5H913 290 aaPredicted RBP22.06■■□□□ 1.12
HLA-C-209ENST00000495835 ENPP6Q6UWR7 440 aa22.06■■□□□ 1.12
HLA-C-209ENST00000495835 SEM1Q6ZVN7 128 aa22.06■■□□□ 1.12
HLA-C-209ENST00000495835 OR2T11Q8NH01 316 aa22.06■■□□□ 1.12
HLA-C-209ENST00000495835 ZFP28Q8NHY6 868 aa22.06■■□□□ 1.12
HLA-C-209ENST00000495835 C3orf14Q9HBI5 128 aa22.06■■□□□ 1.12
HLA-C-209ENST00000495835 Q9N2J8 555 aa22.06■■□□□ 1.12
HLA-C-209ENST00000495835 SERHLQ9NQF3 203 aa22.06■■□□□ 1.12
HLA-C-209ENST00000495835 SLC17A7Q9P2U7 560 aa22.06■■□□□ 1.12
HLA-C-209ENST00000495835 ABCG2Q9UNQ0 655 aa22.06■■□□□ 1.12
HLA-C-209ENST00000495835 CAMK2AQ9UQM7 478 aa22.06■■□□□ 1.12
HLA-C-209ENST00000495835 C2orf72A6NCS6 295 aa22.05■■□□□ 1.12
HLA-C-209ENST00000495835 DVL2O14641 736 aa22.05■■□□□ 1.12
HLA-C-209ENST00000495835 PDPK1O15530 556 aa22.05■■□□□ 1.12
HLA-C-209ENST00000495835 LINC00032P0C843 101 aa22.05■■□□□ 1.12
HLA-C-209ENST00000495835 FRKP42685 505 aaPredicted RBP22.05■■□□□ 1.12
HLA-C-209ENST00000495835 TLE4Q04727 773 aa22.05■■□□□ 1.12
HLA-C-209ENST00000495835 RFTN2Q52LD8 501 aaPredicted RBP22.05■■□□□ 1.12
HLA-C-209ENST00000495835 LRIG3Q6UXM1 1119 aa22.05■■□□□ 1.12
HLA-C-209ENST00000495835 YRDCQ86U90 279 aaKnown RBP22.05■■□□□ 1.12
HLA-C-209ENST00000495835 LIX1LQ8IVB5 337 aa22.05■■□□□ 1.12
HLA-C-209ENST00000495835 TWIST2Q8WVJ9 160 aa22.05■■□□□ 1.12
HLA-C-209ENST00000495835 ZBED6CLQ96FA7 236 aaPredicted RBP22.05■■□□□ 1.12
HLA-C-209ENST00000495835 LRRC46Q96FV0 321 aa22.05■■□□□ 1.12
HLA-C-209ENST00000495835 LMF2Q9BU23 707 aaKnown RBP22.05■■□□□ 1.12
HLA-C-209ENST00000495835 SDHAF3Q9NRP4 125 aa22.05■■□□□ 1.12
HLA-C-209ENST00000495835 ACSS1Q9NUB1 689 aaPredicted RBP22.05■■□□□ 1.12
HLA-C-209ENST00000495835 CBLCQ9ULV8 474 aa22.05■■□□□ 1.12
HLA-C-209ENST00000495835 FIS1Q9Y3D6 152 aa22.05■■□□□ 1.12
HLA-C-209ENST00000495835 OTOGQ6ZRI0 2925 aa22.05■■□□□ 1.12
HLA-C-209ENST00000495835 CHRNGP07510 517 aa22.04■■□□□ 1.12
HLA-C-209ENST00000495835 SDC1P18827 310 aa22.04■■□□□ 1.12
HLA-C-209ENST00000495835 MAPK1P28482 360 aa22.04■■□□□ 1.12
HLA-C-209ENST00000495835 GAS1P54826 345 aa22.04■■□□□ 1.12
HLA-C-209ENST00000495835 PDE7AQ13946 482 aa22.04■■□□□ 1.12
HLA-C-209ENST00000495835 RCAN2Q14206 197 aa22.04■■□□□ 1.12
HLA-C-209ENST00000495835 AAGABQ6PD74 315 aa22.04■■□□□ 1.12
HLA-C-209ENST00000495835 R3HCC1LQ7Z5L2 792 aaKnown RBP22.04■■□□□ 1.12
HLA-C-209ENST00000495835 IFNEQ86WN2 208 aa22.04■■□□□ 1.12
HLA-C-209ENST00000495835 OR4N2Q8NGD1 307 aa22.04■■□□□ 1.12
HLA-C-209ENST00000495835 OR14L1PQ8NHC6 308 aa22.04■■□□□ 1.12
HLA-C-209ENST00000495835 CEP70Q8NHQ1 597 aa22.04■■□□□ 1.12
HLA-C-209ENST00000495835 EFHD2Q96C19 240 aaPredicted RBP22.04■■□□□ 1.12
HLA-C-209ENST00000495835 PPCDCQ96CD2 204 aa22.04■■□□□ 1.12
HLA-C-209ENST00000495835 PPP3R2Q96LZ3 170 aa22.04■■□□□ 1.12
HLA-C-209ENST00000495835 HHATLQ9HCP6 504 aa22.04■■□□□ 1.12
HLA-C-209ENST00000495835 NTMQ9P121 344 aa22.04■■□□□ 1.12
HLA-C-209ENST00000495835 PTGDR2Q9Y5Y4 395 aa22.04■■□□□ 1.12
HLA-C-209ENST00000495835 MBD3L4A6NDZ8 208 aaPredicted RBP22.03■■□□□ 1.12
HLA-C-209ENST00000495835 MBD3L3A6NE82 208 aaPredicted RBP22.03■■□□□ 1.12
HLA-C-209ENST00000495835 MBD3L5A6NJ08 208 aaPredicted RBP22.03■■□□□ 1.12
HLA-C-209ENST00000495835 TMEM114B3SHH9 223 aa22.03■■□□□ 1.12
HLA-C-209ENST00000495835 SYT5O00445 386 aa22.03■■□□□ 1.12
HLA-C-209ENST00000495835 TYROBPO43914 113 aa22.03■■□□□ 1.12
HLA-C-209ENST00000495835 FADS1O60427 444 aa22.03■■□□□ 1.12
HLA-C-209ENST00000495835 SPAG7O75391 227 aa22.03■■□□□ 1.12
HLA-C-209ENST00000495835 NME6O75414 186 aaPredicted RBP22.03■■□□□ 1.12
HLA-C-209ENST00000495835 IL33O95760 270 aa22.03■■□□□ 1.12
HLA-C-209ENST00000495835 PRPS2P11908 318 aa22.03■■□□□ 1.12
HLA-C-209ENST00000495835 CYP4B1P13584 511 aa22.03■■□□□ 1.12
HLA-C-209ENST00000495835 CHMP24386 653 aa22.03■■□□□ 1.12
HLA-C-209ENST00000495835 GRK2P25098 689 aa22.03■■□□□ 1.12
HLA-C-209ENST00000495835 RPL3P39023 403 aaKnown RBP22.03■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms