RNA–Protein interactions for RNA: ENST00000495619.1

NCKAP1-208, Transcript of NCK associated protein 1, humanhuman

TSL 3

Gene NCKAP1, Length 665 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-208ENST00000495619 BCAS2O75934 225 aaPredicted RBP3.6□□□□□ -1.83
NCKAP1-208ENST00000495619 SYNGR4O95473 234 aa3.6□□□□□ -1.83
NCKAP1-208ENST00000495619 IGLV1-47P01700 117 aa3.6□□□□□ -1.83
NCKAP1-208ENST00000495619 CXCL10P02778 98 aa3.6□□□□□ -1.83
NCKAP1-208ENST00000495619 HSPB1P04792 205 aaKnown RBP3.6□□□□□ -1.83
NCKAP1-208ENST00000495619 PGK2P07205 417 aa3.6□□□□□ -1.83
NCKAP1-208ENST00000495619 AHCYP23526 432 aa3.6□□□□□ -1.83
NCKAP1-208ENST00000495619 OR1D4P47884 311 aa3.6□□□□□ -1.83
NCKAP1-208ENST00000495619 SRP54P61011 504 aaKnown RBP3.6□□□□□ -1.83
NCKAP1-208ENST00000495619 PUDPQ08623 228 aa3.6□□□□□ -1.83
NCKAP1-208ENST00000495619 NME3Q13232 169 aa3.6□□□□□ -1.83
NCKAP1-208ENST00000495619 CELF3Q5SZQ8 465 aaKnown RBP3.6□□□□□ -1.83
NCKAP1-208ENST00000495619 YRDCQ86U90 279 aaKnown RBP3.6□□□□□ -1.83
NCKAP1-208ENST00000495619 LEMD2Q8NC56 503 aa3.6□□□□□ -1.83
NCKAP1-208ENST00000495619 OR52E1Q8NGJ3 308 aa3.6□□□□□ -1.83
NCKAP1-208ENST00000495619 FRAT1Q92837 279 aaPredicted RBP3.6□□□□□ -1.83
NCKAP1-208ENST00000495619 TMEM45BQ96B21 275 aa3.6□□□□□ -1.83
NCKAP1-208ENST00000495619 TMEM186Q96B77 213 aa3.6□□□□□ -1.83
NCKAP1-208ENST00000495619 C16orf74Q96GX8 76 aa3.6□□□□□ -1.83
NCKAP1-208ENST00000495619 IMMP1LQ96LU5 166 aa3.6□□□□□ -1.83
NCKAP1-208ENST00000495619 COQ7Q99807 217 aa3.6□□□□□ -1.83
NCKAP1-208ENST00000495619 FTHL17Q9BXU8 183 aa3.6□□□□□ -1.83
NCKAP1-208ENST00000495619 DDX47Q9H0S4 455 aaKnown RBP3.6□□□□□ -1.83
NCKAP1-208ENST00000495619 TNMDQ9H2S6 317 aa3.6□□□□□ -1.83
NCKAP1-208ENST00000495619 DBNDD1Q9H9R9 158 aa3.6□□□□□ -1.83
NCKAP1-208ENST00000495619 ANO10Q9NW15 660 aa3.6□□□□□ -1.83
NCKAP1-208ENST00000495619 LHX3Q9UBR4 397 aa3.6□□□□□ -1.83
NCKAP1-208ENST00000495619 COPS7AQ9UBW8 275 aa3.6□□□□□ -1.83
NCKAP1-208ENST00000495619 BARX2Q9UMQ3 279 aaPredicted RBP3.6□□□□□ -1.83
NCKAP1-208ENST00000495619 LRIT2A6NDA9 550 aa3.59□□□□□ -1.83
NCKAP1-208ENST00000495619 TMEM110-MUSTN1A8MSY1 372 aa3.59□□□□□ -1.83
NCKAP1-208ENST00000495619 TRIM49D1C9J1S8 452 aa3.59□□□□□ -1.83
NCKAP1-208ENST00000495619 HTATSF1O43719 755 aaKnown RBP3.59□□□□□ -1.83
NCKAP1-208ENST00000495619 TMOD1P28289 359 aa3.59□□□□□ -1.83
NCKAP1-208ENST00000495619 UGT1A3P35503 534 aa3.59□□□□□ -1.83
NCKAP1-208ENST00000495619 ACVR1BP36896 505 aa3.59□□□□□ -1.83
NCKAP1-208ENST00000495619 NPY2RP49146 381 aa3.59□□□□□ -1.83
NCKAP1-208ENST00000495619 RIPPLY3P57055 190 aa3.59□□□□□ -1.83
NCKAP1-208ENST00000495619 STARD6P59095 220 aa3.59□□□□□ -1.83
NCKAP1-208ENST00000495619 CAMK4Q16566 473 aa3.59□□□□□ -1.83
NCKAP1-208ENST00000495619 KYAT1Q16773 422 aa3.59□□□□□ -1.83
NCKAP1-208ENST00000495619 ZSWIM7Q19AV6 140 aa3.59□□□□□ -1.83
NCKAP1-208ENST00000495619 ZNF528Q3MIS6 628 aa3.59□□□□□ -1.83
NCKAP1-208ENST00000495619 CMPK2Q5EBM0 449 aa3.59□□□□□ -1.83
NCKAP1-208ENST00000495619 ZNF544Q6NX49 715 aa3.59□□□□□ -1.83
NCKAP1-208ENST00000495619 NEK5Q6P3R8 708 aa3.59□□□□□ -1.83
NCKAP1-208ENST00000495619 DPY19L2P2Q6ZN68 376 aa3.59□□□□□ -1.83
NCKAP1-208ENST00000495619 GET4Q7L5D6 327 aaPredicted RBP3.59□□□□□ -1.83
NCKAP1-208ENST00000495619 PRSS48Q7RTY5 328 aa3.59□□□□□ -1.83
NCKAP1-208ENST00000495619 ADGRD2Q7Z7M1 963 aa3.59□□□□□ -1.83
NCKAP1-208ENST00000495619 TMEM110Q86TL2 294 aa3.59□□□□□ -1.83
NCKAP1-208ENST00000495619 BATF2Q8N1L9 274 aa3.59□□□□□ -1.83
NCKAP1-208ENST00000495619 CCNYQ8ND76 341 aa3.59□□□□□ -1.83
NCKAP1-208ENST00000495619 MGARPQ8TDB4 240 aa3.59□□□□□ -1.83
NCKAP1-208ENST00000495619 DLX4Q92988 240 aaPredicted RBP3.59□□□□□ -1.83
NCKAP1-208ENST00000495619 DPH7Q9BTV6 452 aa3.59□□□□□ -1.83
NCKAP1-208ENST00000495619 NMUR2Q9GZQ4 415 aa3.59□□□□□ -1.83
NCKAP1-208ENST00000495619 NACA2Q9H009 215 aa3.59□□□□□ -1.83
NCKAP1-208ENST00000495619 FAM124BQ9H5Z6 455 aaPredicted RBP3.59□□□□□ -1.83
NCKAP1-208ENST00000495619 NDUFA13Q9P0J0 144 aa3.59□□□□□ -1.83
NCKAP1-208ENST00000495619 FETUBQ9UGM5 382 aa3.59□□□□□ -1.83
NCKAP1-208ENST00000495619 PURGQ9UJV8 347 aaKnown RBP3.59□□□□□ -1.83
NCKAP1-208ENST00000495619 CA5BQ9Y2D0 317 aa3.59□□□□□ -1.83
NCKAP1-208ENST00000495619 RPH3AQ9Y2J0 694 aaPredicted RBP3.59□□□□□ -1.83
NCKAP1-208ENST00000495619 RPGRIP1LQ68CZ1 1315 aa3.59□□□□□ -1.83
NCKAP1-208ENST00000495619 CFAP65Q6ZU64 1925 aaKnown RBP3.58□□□□□ -1.84
NCKAP1-208ENST00000495619 A0A0U1RRA0 63 aa3.58□□□□□ -1.84
NCKAP1-208ENST00000495619 SYCE3A1L190 88 aa3.58□□□□□ -1.84
NCKAP1-208ENST00000495619 IGSF6O95976 241 aa3.58□□□□□ -1.84
NCKAP1-208ENST00000495619 CCDC166P0CW27 439 aa3.58□□□□□ -1.84
NCKAP1-208ENST00000495619 CPN1P15169 458 aa3.58□□□□□ -1.84
NCKAP1-208ENST00000495619 SDC1P18827 310 aa3.58□□□□□ -1.84
NCKAP1-208ENST00000495619 IL2RGP31785 369 aa3.58□□□□□ -1.84
NCKAP1-208ENST00000495619 SLC6A8P48029 635 aa3.58□□□□□ -1.84
NCKAP1-208ENST00000495619 NUMBP49757 651 aa3.58□□□□□ -1.84
NCKAP1-208ENST00000495619 ZNF133P52736 654 aaPredicted RBP3.58□□□□□ -1.84
NCKAP1-208ENST00000495619 RAG2P55895 527 aa3.58□□□□□ -1.84
NCKAP1-208ENST00000495619 NLRP11P59045 1033 aaKnown RBP3.58□□□□□ -1.84
NCKAP1-208ENST00000495619 BTG3Q14201 252 aaPredicted RBP3.58□□□□□ -1.84
NCKAP1-208ENST00000495619 METTL11BQ5VVY1 283 aa3.58□□□□□ -1.84
NCKAP1-208ENST00000495619 OLFM4Q6UX06 510 aa3.58□□□□□ -1.84
NCKAP1-208ENST00000495619 MIER3Q7Z3K6 550 aa3.58□□□□□ -1.84
NCKAP1-208ENST00000495619 BNIPLQ7Z465 357 aa3.58□□□□□ -1.84
NCKAP1-208ENST00000495619 NEK11Q8NG66 645 aa3.58□□□□□ -1.84
NCKAP1-208ENST00000495619 ELSPBP1Q96BH3 223 aa3.58□□□□□ -1.84
NCKAP1-208ENST00000495619 CCDC51Q96ER9 411 aa3.58□□□□□ -1.84
NCKAP1-208ENST00000495619 DNAJA3Q96EY1 480 aa3.58□□□□□ -1.84
NCKAP1-208ENST00000495619 ZNF799Q96GE5 643 aa3.58□□□□□ -1.84
NCKAP1-208ENST00000495619 RUFY1Q96T51 708 aa3.58□□□□□ -1.84
NCKAP1-208ENST00000495619 CHMP4BQ9H444 224 aaKnown RBP3.58□□□□□ -1.84
NCKAP1-208ENST00000495619 EHD1Q9H4M9 534 aa3.58□□□□□ -1.84
NCKAP1-208ENST00000495619 ALG9Q9H6U8 611 aa3.58□□□□□ -1.84
NCKAP1-208ENST00000495619 ZNF702PQ9H963 129 aa3.58□□□□□ -1.84
NCKAP1-208ENST00000495619 MIOXQ9UGB7 285 aa3.58□□□□□ -1.84
NCKAP1-208ENST00000495619 SLC2A6Q9UGQ3 507 aa3.58□□□□□ -1.84
NCKAP1-208ENST00000495619 FKBP7Q9Y680 259 aa3.58□□□□□ -1.84
NCKAP1-208ENST00000495619 GRIN2DO15399 1336 aa3.58□□□□□ -1.84
NCKAP1-208ENST00000495619 TMEM89A2RUT3 159 aa3.57□□□□□ -1.84
NCKAP1-208ENST00000495619 PDXKO00764 312 aa3.57□□□□□ -1.84
NCKAP1-208ENST00000495619 NOL4O94818 638 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms