RNA–Protein interactions for RNA: ENST00000494780.1

COL27A1-208, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 4

Gene COL27A1, Length 514 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-208ENST00000494780 TIFABQ6ZNK6 161 aa21.06■□□□□ 0.96
COL27A1-208ENST00000494780 LCA5Q86VQ0 697 aa21.06■□□□□ 0.96
COL27A1-208ENST00000494780 GRAMD2AQ8IUY3 354 aa21.06■□□□□ 0.96
COL27A1-208ENST00000494780 GCNT2Q8N0V5 402 aa21.06■□□□□ 0.96
COL27A1-208ENST00000494780 C16orf78Q8WTQ4 265 aa21.06■□□□□ 0.96
COL27A1-208ENST00000494780 SMPDL3BQ92485 455 aa21.06■□□□□ 0.96
COL27A1-208ENST00000494780 TMEM237Q96Q45 408 aa21.06■□□□□ 0.96
COL27A1-208ENST00000494780 SLC35C2Q9NQQ7 365 aa21.06■□□□□ 0.96
COL27A1-208ENST00000494780 TMEM216Q9P0N5 145 aa21.06■□□□□ 0.96
COL27A1-208ENST00000494780 PACSIN3Q9UKS6 424 aa21.06■□□□□ 0.96
COL27A1-208ENST00000494780 STK38LQ9Y2H1 464 aa21.06■□□□□ 0.96
COL27A1-208ENST00000494780 FLNAP21333 2647 aaKnown RBP21.06■□□□□ 0.96
COL27A1-208ENST00000494780 EXOC1LA0A1B0GW35 172 aa21.05■□□□□ 0.96
COL27A1-208ENST00000494780 A8MXE2 369 aa21.05■□□□□ 0.96
COL27A1-208ENST00000494780 HCRTR2O43614 444 aa21.05■□□□□ 0.96
COL27A1-208ENST00000494780 DLX3O60479 287 aa21.05■□□□□ 0.96
COL27A1-208ENST00000494780 ZIC3O60481 467 aa21.05■□□□□ 0.96
COL27A1-208ENST00000494780 PLOD3O60568 738 aa21.05■□□□□ 0.96
COL27A1-208ENST00000494780 IMPDH1P20839 514 aa21.05■□□□□ 0.96
COL27A1-208ENST00000494780 DPP4P27487 766 aa21.05■□□□□ 0.96
COL27A1-208ENST00000494780 TIA1P31483 386 aaKnown RBP eCLIP21.05■□□□□ 0.96
COL27A1-208ENST00000494780 MPIP34949 423 aa21.05■□□□□ 0.96
COL27A1-208ENST00000494780 GSTM5P46439 218 aa21.05■□□□□ 0.96
COL27A1-208ENST00000494780 GAS1P54826 345 aa21.05■□□□□ 0.96
COL27A1-208ENST00000494780 OR5M10Q6IEU7 315 aa21.05■□□□□ 0.96
COL27A1-208ENST00000494780 GALNT18Q6P9A2 607 aa21.05■□□□□ 0.96
COL27A1-208ENST00000494780 PLXDC2Q6UX71 529 aa21.05■□□□□ 0.96
COL27A1-208ENST00000494780 FAM9CQ8IZT9 166 aa21.05■□□□□ 0.96
COL27A1-208ENST00000494780 MTBPQ96DY7 904 aa21.05■□□□□ 0.96
COL27A1-208ENST00000494780 APIPQ96GX9 242 aa21.05■□□□□ 0.96
COL27A1-208ENST00000494780 STMN4Q9H169 189 aaPredicted RBP21.05■□□□□ 0.96
COL27A1-208ENST00000494780 TAS2R9Q9NYW1 312 aa21.05■□□□□ 0.96
COL27A1-208ENST00000494780 TNFSF12-TNFSF13A0A0A6YY99 330 aa21.04■□□□□ 0.96
COL27A1-208ENST00000494780 NME6O75414 186 aaPredicted RBP21.04■□□□□ 0.96
COL27A1-208ENST00000494780 TNFSF13O75888 250 aa21.04■□□□□ 0.96
COL27A1-208ENST00000494780 ENO1P06733 434 aaKnown RBP21.04■□□□□ 0.96
COL27A1-208ENST00000494780 CRHP06850 196 aa21.04■□□□□ 0.96
COL27A1-208ENST00000494780 ATP5F1P24539 256 aaPredicted RBP21.04■□□□□ 0.96
COL27A1-208ENST00000494780 HTR6P50406 440 aa21.04■□□□□ 0.96
COL27A1-208ENST00000494780 SLC22A9Q8IVM8 553 aa21.04■□□□□ 0.96
COL27A1-208ENST00000494780 SLC44A2Q8IWA5 706 aaPredicted RBP21.04■□□□□ 0.96
COL27A1-208ENST00000494780 NOA1Q8NC60 698 aaKnown RBP21.04■□□□□ 0.96
COL27A1-208ENST00000494780 OR7G2Q8NG99 324 aa21.04■□□□□ 0.96
COL27A1-208ENST00000494780 OR4K17Q8NGC6 315 aa21.04■□□□□ 0.96
COL27A1-208ENST00000494780 C11orf24Q96F05 449 aaPredicted RBP21.04■□□□□ 0.96
COL27A1-208ENST00000494780 GSX1Q9H4S2 264 aaPredicted RBP21.04■□□□□ 0.96
COL27A1-208ENST00000494780 NEUROD4Q9HD90 331 aa21.04■□□□□ 0.96
COL27A1-208ENST00000494780 SIRT5Q9NXA8 310 aa21.04■□□□□ 0.96
COL27A1-208ENST00000494780 SENP1Q9P0U3 644 aa21.04■□□□□ 0.96
COL27A1-208ENST00000494780 NDRG3Q9UGV2 375 aa21.04■□□□□ 0.96
COL27A1-208ENST00000494780 A0A1W2PNV4 684 aa21.03■□□□□ 0.96
COL27A1-208ENST00000494780 CCDC151A5D8V7 595 aa21.03■□□□□ 0.96
COL27A1-208ENST00000494780 MSTNO14793 375 aa21.03■□□□□ 0.96
COL27A1-208ENST00000494780 CASKO14936 926 aa21.03■□□□□ 0.96
COL27A1-208ENST00000494780 TGM6O95932 706 aa21.03■□□□□ 0.96
COL27A1-208ENST00000494780 PKNOX1P55347 436 aa21.03■□□□□ 0.96
COL27A1-208ENST00000494780 DSCR4P56555 118 aaPredicted RBP21.03■□□□□ 0.96
COL27A1-208ENST00000494780 LCP2Q13094 533 aa21.03■□□□□ 0.96
COL27A1-208ENST00000494780 POU4F3Q15319 338 aa21.03■□□□□ 0.96
COL27A1-208ENST00000494780 GLE1Q53GS7 698 aaKnown RBP21.03■□□□□ 0.96
COL27A1-208ENST00000494780 MED12LQ86YW9 2145 aa21.03■□□□□ 0.96
COL27A1-208ENST00000494780 WFDC11Q8NEX6 87 aa21.03■□□□□ 0.96
COL27A1-208ENST00000494780 EFHD2Q96C19 240 aaPredicted RBP21.03■□□□□ 0.96
COL27A1-208ENST00000494780 BEX4Q9NWD9 120 aaPredicted RBP21.03■□□□□ 0.96
COL27A1-208ENST00000494780 OR10H1Q9Y4A9 318 aa21.03■□□□□ 0.96
COL27A1-208ENST00000494780 NAV3Q8IVL0 2385 aa21.03■□□□□ 0.96
COL27A1-208ENST00000494780 NIPBLQ6KC79 2804 aaeCLIP21.02■□□□□ 0.96
COL27A1-208ENST00000494780 SERTM1A2A2V5 107 aa21.02■□□□□ 0.96
COL27A1-208ENST00000494780 COQ9O75208 318 aa21.02■□□□□ 0.96
COL27A1-208ENST00000494780 ABHD2P08910 425 aa21.02■□□□□ 0.96
COL27A1-208ENST00000494780 ANXA4P09525 319 aaPredicted RBP21.02■□□□□ 0.96
COL27A1-208ENST00000494780 CTAGE8P0CG41 777 aa21.02■□□□□ 0.96
COL27A1-208ENST00000494780 PEPDP12955 493 aa21.02■□□□□ 0.96
COL27A1-208ENST00000494780 CD53P19397 219 aa21.02■□□□□ 0.96
COL27A1-208ENST00000494780 GCAP28676 217 aa21.02■□□□□ 0.96
COL27A1-208ENST00000494780 HOXC12P31275 282 aa21.02■□□□□ 0.96
COL27A1-208ENST00000494780 PCYT1AP49585 367 aa21.02■□□□□ 0.96
COL27A1-208ENST00000494780 PRKAA2P54646 552 aa21.02■□□□□ 0.96
COL27A1-208ENST00000494780 B3GALT5-AS1P59052 145 aa21.02■□□□□ 0.96
COL27A1-208ENST00000494780 OR2A2Q6IF42 318 aa21.02■□□□□ 0.96
COL27A1-208ENST00000494780 CHMP1BQ7LBR1 199 aa21.02■□□□□ 0.96
COL27A1-208ENST00000494780 P4HA3Q7Z4N8 544 aa21.02■□□□□ 0.96
COL27A1-208ENST00000494780 CTAGE4Q8IX94 777 aa21.02■□□□□ 0.96
COL27A1-208ENST00000494780 MNS1Q8NEH6 495 aa21.02■□□□□ 0.96
COL27A1-208ENST00000494780 OR4N2Q8NGD1 307 aa21.02■□□□□ 0.96
COL27A1-208ENST00000494780 L3HYPDHQ96EM0 354 aa21.02■□□□□ 0.96
COL27A1-208ENST00000494780 C16orf45Q96MC5 204 aaPredicted RBP21.02■□□□□ 0.96
COL27A1-208ENST00000494780 BBS4Q96RK4 519 aa21.02■□□□□ 0.96
COL27A1-208ENST00000494780 EBPLQ9BY08 206 aa21.02■□□□□ 0.96
COL27A1-208ENST00000494780 PPP4R1LQ9P1A2 415 aa21.02■□□□□ 0.96
COL27A1-208ENST00000494780 EIF3LQ9Y262 564 aaKnown RBP21.02■□□□□ 0.96
COL27A1-208ENST00000494780 A0A1W2PPR1 153 aa21.01■□□□□ 0.95
COL27A1-208ENST00000494780 MYO1GB0I1T2 1018 aa21.01■□□□□ 0.95
COL27A1-208ENST00000494780 B4DXG7 233 aa21.01■□□□□ 0.95
COL27A1-208ENST00000494780 SLITRK5O94991 958 aa21.01■□□□□ 0.95
COL27A1-208ENST00000494780 DDCP20711 480 aa21.01■□□□□ 0.95
COL27A1-208ENST00000494780 TCEA1P23193 301 aaKnown RBP21.01■□□□□ 0.95
COL27A1-208ENST00000494780 EVI2BP34910 448 aa21.01■□□□□ 0.95
COL27A1-208ENST00000494780 PSG6Q00889 435 aa21.01■□□□□ 0.95
COL27A1-208ENST00000494780 ZNF155Q12901 538 aaPredicted RBP21.01■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms