RNA–Protein interactions for RNA: ENST00000494618.1

NCL-210, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 910 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-210ENST00000494618 GLT8D2Q9H1C3 349 aa3.48□□□□□ -1.85
NCL-210ENST00000494618 DCAF13Q9NV06 445 aaKnown RBP3.48□□□□□ -1.85
NCL-210ENST00000494618 TRIM49D1C9J1S8 452 aa3.47□□□□□ -1.85
NCL-210ENST00000494618 TLR4O00206 839 aa3.47□□□□□ -1.85
NCL-210ENST00000494618 PDXKO00764 312 aa3.47□□□□□ -1.85
NCL-210ENST00000494618 OR7A17O14581 309 aa3.47□□□□□ -1.85
NCL-210ENST00000494618 STK17BO94768 372 aa3.47□□□□□ -1.85
NCL-210ENST00000494618 HOXC4P09017 264 aaPredicted RBP3.47□□□□□ -1.85
NCL-210ENST00000494618 NR2C1P13056 603 aa3.47□□□□□ -1.85
NCL-210ENST00000494618 GNSP15586 552 aa3.47□□□□□ -1.85
NCL-210ENST00000494618 MAGEA4P43358 317 aa3.47□□□□□ -1.85
NCL-210ENST00000494618 RPL32P62910 135 aaKnown RBP3.47□□□□□ -1.85
NCL-210ENST00000494618 CKAP4Q07065 602 aaKnown RBP3.47□□□□□ -1.85
NCL-210ENST00000494618 BEND6Q5SZJ8 279 aaPredicted RBP3.47□□□□□ -1.85
NCL-210ENST00000494618 METTL11BQ5VVY1 283 aa3.47□□□□□ -1.85
NCL-210ENST00000494618 DLEU7Q6UYE1 221 aa3.47□□□□□ -1.85
NCL-210ENST00000494618 PEX5LQ8IYB4 626 aa3.47□□□□□ -1.85
NCL-210ENST00000494618 RNF138Q8WVD3 245 aa3.47□□□□□ -1.85
NCL-210ENST00000494618 VPS39Q96JC1 886 aa3.47□□□□□ -1.85
NCL-210ENST00000494618 ZNF560Q96MR9 790 aa3.47□□□□□ -1.85
NCL-210ENST00000494618 CBWD1Q9BRT8 395 aa3.47□□□□□ -1.85
NCL-210ENST00000494618 CARD6Q9BX69 1037 aa3.47□□□□□ -1.85
NCL-210ENST00000494618 TEX13AQ9BXU3 409 aaPredicted RBP3.47□□□□□ -1.85
NCL-210ENST00000494618 ABCG8Q9H221 673 aa3.47□□□□□ -1.85
NCL-210ENST00000494618 FAM114A2Q9NRY5 505 aa3.47□□□□□ -1.85
NCL-210ENST00000494618 CWC25Q9NXE8 425 aaPredicted RBP3.47□□□□□ -1.85
NCL-210ENST00000494618 OBSCNQ5VST9 7968 aa3.46□□□□□ -1.85
NCL-210ENST00000494618 LRP3O75074 770 aa3.46□□□□□ -1.86
NCL-210ENST00000494618 GOSR1O95249 250 aa3.46□□□□□ -1.86
NCL-210ENST00000494618 IGHV3-23P01764 117 aa3.46□□□□□ -1.86
NCL-210ENST00000494618 PROS1P07225 676 aa3.46□□□□□ -1.86
NCL-210ENST00000494618 NUMBP49757 651 aa3.46□□□□□ -1.86
NCL-210ENST00000494618 UCNP55089 124 aa3.46□□□□□ -1.86
NCL-210ENST00000494618 ORC2Q13416 577 aaPredicted RBP3.46□□□□□ -1.86
NCL-210ENST00000494618 ZKSCAN8Q15776 578 aaPredicted RBP3.46□□□□□ -1.86
NCL-210ENST00000494618 PKN2Q16513 984 aaKnown RBP3.46□□□□□ -1.86
NCL-210ENST00000494618 PARP6Q2NL67 630 aa3.46□□□□□ -1.86
NCL-210ENST00000494618 IGFL2Q6UWQ7 119 aa3.46□□□□□ -1.86
NCL-210ENST00000494618 TMEM179BQ7Z7N9 219 aa3.46□□□□□ -1.86
NCL-210ENST00000494618 PARGQ86W56 976 aa3.46□□□□□ -1.86
NCL-210ENST00000494618 DHTKD1Q96HY7 919 aaPredicted RBP3.46□□□□□ -1.86
NCL-210ENST00000494618 TM2D1Q9BX74 207 aa3.46□□□□□ -1.86
NCL-210ENST00000494618 DDX47Q9H0S4 455 aaKnown RBP3.46□□□□□ -1.86
NCL-210ENST00000494618 Q9H3A6 140 aa3.46□□□□□ -1.86
NCL-210ENST00000494618 HMG20BQ9P0W2 317 aa3.46□□□□□ -1.86
NCL-210ENST00000494618 MBD2Q9UBB5 411 aa3.46□□□□□ -1.86
NCL-210ENST00000494618 PINLYPA6NC86 204 aa3.45□□□□□ -1.86
NCL-210ENST00000494618 TMEM110-MUSTN1A8MSY1 372 aa3.45□□□□□ -1.86
NCL-210ENST00000494618 PTBP1P26599 531 aaKnown RBP eCLIP3.45□□□□□ -1.863e-14■■■□□ 15.2
NCL-210ENST00000494618 HNRNPFP52597 415 aaKnown RBP3.45□□□□□ -1.86
NCL-210ENST00000494618 CASP9P55211 416 aa3.45□□□□□ -1.86
NCL-210ENST00000494618 ZNF699Q32M78 642 aa3.45□□□□□ -1.86
NCL-210ENST00000494618 ACSF3Q4G176 576 aaPredicted RBP3.45□□□□□ -1.86
NCL-210ENST00000494618 WSCD1Q658N2 575 aa3.45□□□□□ -1.86
NCL-210ENST00000494618 DMKNQ6E0U4 476 aaPredicted RBP3.45□□□□□ -1.86
NCL-210ENST00000494618 GOLGA7Q7Z5G4 137 aa3.45□□□□□ -1.86
NCL-210ENST00000494618 TMEM110Q86TL2 294 aa3.45□□□□□ -1.86
NCL-210ENST00000494618 AMZ2Q86W34 360 aa3.45□□□□□ -1.86
NCL-210ENST00000494618 TGIF2LYQ8IUE0 185 aa3.45□□□□□ -1.86
NCL-210ENST00000494618 ERI1Q8IV48 349 aaKnown RBP3.45□□□□□ -1.86
NCL-210ENST00000494618 LRRC17Q8N6Y2 441 aa3.45□□□□□ -1.86
NCL-210ENST00000494618 CSNK1A1LQ8N752 337 aa3.45□□□□□ -1.86
NCL-210ENST00000494618 PHYHIPQ92561 330 aa3.45□□□□□ -1.86
NCL-210ENST00000494618 MARC2Q969Z3 335 aa3.45□□□□□ -1.86
NCL-210ENST00000494618 NDUFAF3Q9BU61 184 aa3.45□□□□□ -1.86
NCL-210ENST00000494618 FZR1Q9UM11 496 aa3.45□□□□□ -1.86
NCL-210ENST00000494618 TDRKHQ9Y2W6 561 aaKnown RBP3.45□□□□□ -1.86
NCL-210ENST00000494618 TRBV2A0A0J9YWF9 115 aa3.44□□□□□ -1.86
NCL-210ENST00000494618 TOXO94900 526 aa3.44□□□□□ -1.86
NCL-210ENST00000494618 CXCL14O95715 111 aa3.44□□□□□ -1.86
NCL-210ENST00000494618 IGFBP1P08833 259 aaPredicted RBP3.44□□□□□ -1.86
NCL-210ENST00000494618 HMOX1P09601 288 aa3.44□□□□□ -1.86
NCL-210ENST00000494618 SLC35G4P0C7Q5 338 aa3.44□□□□□ -1.86
NCL-210ENST00000494618 MDKP21741 143 aaPredicted RBP3.44□□□□□ -1.86
NCL-210ENST00000494618 RFC2P35250 354 aa3.44□□□□□ -1.86
NCL-210ENST00000494618 GNB2P62879 340 aa3.44□□□□□ -1.86
NCL-210ENST00000494618 HERVK_113P63132 956 aa3.44□□□□□ -1.86
NCL-210ENST00000494618 ERVK-8P63133 956 aa3.44□□□□□ -1.86
NCL-210ENST00000494618 UBXN1Q04323 297 aa3.44□□□□□ -1.86
NCL-210ENST00000494618 GFPT1Q06210 699 aaPredicted RBP3.44□□□□□ -1.86
NCL-210ENST00000494618 BCL2L1Q07817 233 aa3.44□□□□□ -1.86
NCL-210ENST00000494618 PSG7Q13046 419 aa3.44□□□□□ -1.86
NCL-210ENST00000494618 CYP51A1Q16850 503 aa3.44□□□□□ -1.86
NCL-210ENST00000494618 ZNF528Q3MIS6 628 aa3.44□□□□□ -1.86
NCL-210ENST00000494618 P4HA3Q7Z4N8 544 aa3.44□□□□□ -1.86
NCL-210ENST00000494618 SFRP1Q8N474 314 aa3.44□□□□□ -1.86
NCL-210ENST00000494618 ZNF397Q8NF99 534 aaPredicted RBP3.44□□□□□ -1.86
NCL-210ENST00000494618 SNX21Q969T3 373 aa3.44□□□□□ -1.86
NCL-210ENST00000494618 TADA1Q96BN2 335 aa3.44□□□□□ -1.86
NCL-210ENST00000494618 CCDC51Q96ER9 411 aa3.44□□□□□ -1.86
NCL-210ENST00000494618 DTD2Q96FN9 168 aa3.44□□□□□ -1.86
NCL-210ENST00000494618 ERVK-6Q9BXR3 956 aa3.44□□□□□ -1.86
NCL-210ENST00000494618 PRMT8Q9NR22 394 aaPredicted RBP3.44□□□□□ -1.86
NCL-210ENST00000494618 DUS2Q9NX74 493 aaKnown RBP3.44□□□□□ -1.86
NCL-210ENST00000494618 EHFQ9NZC4 300 aa3.44□□□□□ -1.86
NCL-210ENST00000494618 ZMYM6O95789 1325 aa3.44□□□□□ -1.86
NCL-210ENST00000494618 B4DXG7 233 aa3.43□□□□□ -1.86
NCL-210ENST00000494618 HTATSF1O43719 755 aaKnown RBP3.43□□□□□ -1.86
NCL-210ENST00000494618 RAMP1O60894 148 aa3.43□□□□□ -1.86
NCL-210ENST00000494618 SLC6A8P48029 635 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms