RNA–Protein interactions for RNA: ENST00000494255.5

TRA2A-209, Transcript of transformer 2 alpha homolog, humanhuman

TSL 1 (best)

Gene TRA2A, Length 1,653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-209ENST00000494255 OR4N2Q8NGD1 307 aa11.46□□□□□ -0.57
TRA2A-209ENST00000494255 GOT1L1Q8NHS2 421 aaPredicted RBP11.46□□□□□ -0.57
TRA2A-209ENST00000494255 ADAMTS15Q8TE58 950 aa11.46□□□□□ -0.57
TRA2A-209ENST00000494255 HOXB13Q92826 284 aaPredicted RBP11.46□□□□□ -0.57
TRA2A-209ENST00000494255 RMND5BQ96G75 393 aaPredicted RBP11.46□□□□□ -0.57
TRA2A-209ENST00000494255 SLC35A4Q96G79 324 aa11.46□□□□□ -0.57
TRA2A-209ENST00000494255 C16orf58Q96GQ5 468 aa11.46□□□□□ -0.57
TRA2A-209ENST00000494255 SLC35G5Q96KT7 338 aa11.46□□□□□ -0.57
TRA2A-209ENST00000494255 ADOQ96SZ5 270 aa11.46□□□□□ -0.57
TRA2A-209ENST00000494255 STACQ99469 402 aa11.46□□□□□ -0.57
TRA2A-209ENST00000494255 SLC35A5Q9BS91 424 aa11.46□□□□□ -0.57
TRA2A-209ENST00000494255 DOHHQ9BU89 302 aa11.46□□□□□ -0.57
TRA2A-209ENST00000494255 TRIM4Q9C037 500 aa11.46□□□□□ -0.57
TRA2A-209ENST00000494255 DEPPQ9NTK1 212 aa11.46□□□□□ -0.57
TRA2A-209ENST00000494255 CNOT11Q9UKZ1 510 aaKnown RBP11.46□□□□□ -0.57
TRA2A-209ENST00000494255 NTNG1Q9Y2I2 539 aa11.46□□□□□ -0.57
TRA2A-209ENST00000494255 PCDHGB3Q9Y5G1 929 aa11.46□□□□□ -0.57
TRA2A-209ENST00000494255 EML6Q6ZMW3 1958 aa11.46□□□□□ -0.57
TRA2A-209ENST00000494255 GXYLT2A0PJZ3 443 aa11.46□□□□□ -0.58
TRA2A-209ENST00000494255 ANKRD33BA6NCL7 494 aa11.46□□□□□ -0.58
TRA2A-209ENST00000494255 ACOT7O00154 380 aa11.46□□□□□ -0.58
TRA2A-209ENST00000494255 TSPAN2O60636 221 aa11.46□□□□□ -0.58
TRA2A-209ENST00000494255 UGT2B11O75310 529 aa11.46□□□□□ -0.58
TRA2A-209ENST00000494255 ZNF24P17028 368 aa11.46□□□□□ -0.58
TRA2A-209ENST00000494255 MAP3K8P41279 467 aa11.46□□□□□ -0.58
TRA2A-209ENST00000494255 RFX3P48380 749 aa11.46□□□□□ -0.58
TRA2A-209ENST00000494255 GNGT1P63211 74 aa11.46□□□□□ -0.58
TRA2A-209ENST00000494255 RCAN2Q14206 197 aa11.46□□□□□ -0.58
TRA2A-209ENST00000494255 DUSP5Q16690 384 aa11.46□□□□□ -0.58
TRA2A-209ENST00000494255 C6orf10Q5SRN2 563 aa11.46□□□□□ -0.58
TRA2A-209ENST00000494255 BLOC1S3Q6QNY0 202 aa11.46□□□□□ -0.58
TRA2A-209ENST00000494255 ANGPTL8Q6UXH0 198 aa11.46□□□□□ -0.58
TRA2A-209ENST00000494255 ZFP62Q8NB50 900 aaPredicted RBP11.46□□□□□ -0.58
TRA2A-209ENST00000494255 PIK3R3Q92569 461 aa11.46□□□□□ -0.58
TRA2A-209ENST00000494255 NR4A3Q92570 626 aa11.46□□□□□ -0.58
TRA2A-209ENST00000494255 HGDQ93099 445 aa11.46□□□□□ -0.58
TRA2A-209ENST00000494255 VPS33AQ96AX1 596 aa11.46□□□□□ -0.58
TRA2A-209ENST00000494255 EFHD2Q96C19 240 aaPredicted RBP11.46□□□□□ -0.58
TRA2A-209ENST00000494255 SPDL1Q96EA4 605 aa11.46□□□□□ -0.58
TRA2A-209ENST00000494255 FRMD6Q96NE9 622 aa11.46□□□□□ -0.58
TRA2A-209ENST00000494255 INPP5KQ9BT40 448 aa11.46□□□□□ -0.58
TRA2A-209ENST00000494255 FAM107BQ9H098 131 aa11.46□□□□□ -0.58
TRA2A-209ENST00000494255 PIGUQ9H490 435 aa11.46□□□□□ -0.58
TRA2A-209ENST00000494255 DUSP22Q9NRW4 184 aa11.46□□□□□ -0.58
TRA2A-209ENST00000494255 GPATCH2Q9NW75 528 aa11.46□□□□□ -0.58
TRA2A-209ENST00000494255 GIN1Q9NXP7 522 aa11.46□□□□□ -0.58
TRA2A-209ENST00000494255 BOKQ9UMX3 212 aaPredicted RBP11.46□□□□□ -0.58
TRA2A-209ENST00000494255 BOD1L1Q8NFC6 3051 aa11.45□□□□□ -0.58
TRA2A-209ENST00000494255 A0A0G2JMM0 328 aa11.45□□□□□ -0.58
TRA2A-209ENST00000494255 A0A1W2PPB8 328 aa11.45□□□□□ -0.58
TRA2A-209ENST00000494255 A0A1W2PRS3 328 aa11.45□□□□□ -0.58
TRA2A-209ENST00000494255 GMNCA6NCL1 334 aa11.45□□□□□ -0.58
TRA2A-209ENST00000494255 DUXAA6NLW8 204 aa11.45□□□□□ -0.58
TRA2A-209ENST00000494255 KIR3DP1A8MWS1 328 aa11.45□□□□□ -0.58
TRA2A-209ENST00000494255 TFECO14948 347 aaPredicted RBP11.45□□□□□ -0.58
TRA2A-209ENST00000494255 IL33O95760 270 aa11.45□□□□□ -0.58
TRA2A-209ENST00000494255 MATN1P21941 496 aa11.45□□□□□ -0.58
TRA2A-209ENST00000494255 TRPC1P48995 793 aa11.45□□□□□ -0.58
TRA2A-209ENST00000494255 DNASE1L1P49184 302 aa11.45□□□□□ -0.58
TRA2A-209ENST00000494255 SEC24CP53992 1094 aa11.45□□□□□ -0.58
TRA2A-209ENST00000494255 POU6F2P78424 691 aaPredicted RBP11.45□□□□□ -0.58
TRA2A-209ENST00000494255 SAXO2Q658L1 398 aa11.45□□□□□ -0.58
TRA2A-209ENST00000494255 DNAJC14Q6Y2X3 702 aaPredicted RBP11.45□□□□□ -0.58
TRA2A-209ENST00000494255 CPLX4Q7Z7G2 160 aa11.45□□□□□ -0.58
TRA2A-209ENST00000494255 PACS2Q86VP3 889 aa11.45□□□□□ -0.58
TRA2A-209ENST00000494255 ATCAYQ86WG3 371 aa11.45□□□□□ -0.58
TRA2A-209ENST00000494255 FUNDC1Q8IVP5 155 aa11.45□□□□□ -0.58
TRA2A-209ENST00000494255 CLEC4FQ8N1N0 589 aa11.45□□□□□ -0.58
TRA2A-209ENST00000494255 CDS1Q92903 461 aa11.45□□□□□ -0.58
TRA2A-209ENST00000494255 MIB2Q96AX9 1013 aa11.45□□□□□ -0.58
TRA2A-209ENST00000494255 NEURL3Q96EH8 262 aa11.45□□□□□ -0.58
TRA2A-209ENST00000494255 OTUB1Q96FW1 271 aaPredicted RBP11.45□□□□□ -0.58
TRA2A-209ENST00000494255 BTBD2Q9BX70 525 aa11.45□□□□□ -0.58
TRA2A-209ENST00000494255 ZNF385DQ9H6B1 395 aa11.45□□□□□ -0.58
TRA2A-209ENST00000494255 KLRF1Q9NZS2 232 aa11.45□□□□□ -0.58
TRA2A-209ENST00000494255 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.45□□□□□ -0.58
TRA2A-209ENST00000494255 PRAMEF25A6NGN4 478 aa11.44□□□□□ -0.58
TRA2A-209ENST00000494255 KCNK2O95069 426 aa11.44□□□□□ -0.58
TRA2A-209ENST00000494255 SNX4O95219 450 aa11.44□□□□□ -0.58
TRA2A-209ENST00000494255 KRT75O95678 551 aa11.44□□□□□ -0.58
TRA2A-209ENST00000494255 GSNP06396 782 aa11.44□□□□□ -0.58
TRA2A-209ENST00000494255 CYP4B1P13584 511 aa11.44□□□□□ -0.58
TRA2A-209ENST00000494255 RFC3P40938 356 aa11.44□□□□□ -0.58
TRA2A-209ENST00000494255 CASP3P42574 277 aa11.44□□□□□ -0.58
TRA2A-209ENST00000494255 CDKN2CP42773 168 aa11.44□□□□□ -0.58
TRA2A-209ENST00000494255 MASP1P48740 699 aa11.44□□□□□ -0.58
TRA2A-209ENST00000494255 KHKP50053 298 aa11.44□□□□□ -0.58
TRA2A-209ENST00000494255 ANXA11P50995 505 aaKnown RBP11.44□□□□□ -0.58
TRA2A-209ENST00000494255 RPS26P62854 115 aaKnown RBP11.44□□□□□ -0.58
TRA2A-209ENST00000494255 FOXK1P85037 733 aa11.44□□□□□ -0.58
TRA2A-209ENST00000494255 SNTA1Q13424 505 aa11.44□□□□□ -0.58
TRA2A-209ENST00000494255 EXOSC6Q5RKV6 272 aaKnown RBP11.44□□□□□ -0.58
TRA2A-209ENST00000494255 BICRALQ6AI39 1079 aa11.44□□□□□ -0.58
TRA2A-209ENST00000494255 DESI1Q6ICB0 168 aa11.44□□□□□ -0.58
TRA2A-209ENST00000494255 SLC30A6Q6NXT4 461 aa11.44□□□□□ -0.58
TRA2A-209ENST00000494255 TMEM81Q6P7N7 255 aa11.44□□□□□ -0.58
TRA2A-209ENST00000494255 SPATA21Q7Z572 469 aa11.44□□□□□ -0.58
TRA2A-209ENST00000494255 SLC22A16Q86VW1 577 aa11.44□□□□□ -0.58
TRA2A-209ENST00000494255 C10orf82Q8WW14 230 aa11.44□□□□□ -0.58
TRA2A-209ENST00000494255 ZNF597Q96LX8 424 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms