RNA–Protein interactions for RNA: ENST00000493903.1

GTF3A-208, Transcript of general transcription factor IIIA, humanhuman

TSL 3

Gene GTF3A, Length 748 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-208ENST00000493903 ADGBQ8N7X0 1667 aa3.84□□□□□ -1.8
GTF3A-208ENST00000493903 PLSCR5A0PG75 271 aa3.83□□□□□ -1.8
GTF3A-208ENST00000493903 METTL21EPA6NDL7 271 aa3.83□□□□□ -1.8
GTF3A-208ENST00000493903 CYB561D2O14569 222 aa3.83□□□□□ -1.8
GTF3A-208ENST00000493903 EI24O14681 340 aa3.83□□□□□ -1.8
GTF3A-208ENST00000493903 WBP4O75554 376 aaKnown RBP3.83□□□□□ -1.8
GTF3A-208ENST00000493903 MTRF1O75570 445 aaKnown RBP3.83□□□□□ -1.8
GTF3A-208ENST00000493903 CEACAM4O75871 244 aa3.83□□□□□ -1.8
GTF3A-208ENST00000493903 AP2A2O94973 939 aa3.83□□□□□ -1.8
GTF3A-208ENST00000493903 NADKO95544 446 aaPredicted RBP3.83□□□□□ -1.8
GTF3A-208ENST00000493903 PNMTP11086 282 aa3.83□□□□□ -1.8
GTF3A-208ENST00000493903 MX1P20591 662 aa3.83□□□□□ -1.8
GTF3A-208ENST00000493903 RFC4P35249 363 aa3.83□□□□□ -1.8
GTF3A-208ENST00000493903 RFC2P35250 354 aa3.83□□□□□ -1.8
GTF3A-208ENST00000493903 PLA2G16P53816 162 aa3.83□□□□□ -1.8
GTF3A-208ENST00000493903 XGP55808 180 aa3.83□□□□□ -1.8
GTF3A-208ENST00000493903 RPS8P62241 208 aaKnown RBP3.83□□□□□ -1.8
GTF3A-208ENST00000493903 RBBP4Q09028 425 aa3.83□□□□□ -1.8
GTF3A-208ENST00000493903 TMED1Q13445 227 aa3.83□□□□□ -1.8
GTF3A-208ENST00000493903 TFDP1Q14186 410 aa3.83□□□□□ -1.8
GTF3A-208ENST00000493903 SLC17A1Q14916 467 aa3.83□□□□□ -1.8
GTF3A-208ENST00000493903 SGSM1Q2NKQ1 1148 aa3.83□□□□□ -1.8
GTF3A-208ENST00000493903 GLIPR1L2Q4G1C9 344 aa3.83□□□□□ -1.8
GTF3A-208ENST00000493903 HSP90AB3PQ58FF7 597 aa3.83□□□□□ -1.8
GTF3A-208ENST00000493903 ARMC12Q5T9G4 340 aa3.83□□□□□ -1.8
GTF3A-208ENST00000493903 PRAMEF20Q5VT98 475 aa3.83□□□□□ -1.8
GTF3A-208ENST00000493903 ZSCAN25Q6NSZ9 544 aa3.83□□□□□ -1.8
GTF3A-208ENST00000493903 ATRAIDQ6UW56 229 aa3.83□□□□□ -1.8
GTF3A-208ENST00000493903 ZNF841Q6ZN19 808 aa3.83□□□□□ -1.8
GTF3A-208ENST00000493903 NLRP9Q7RTR0 991 aa3.83□□□□□ -1.8
GTF3A-208ENST00000493903 ANKRD37Q7Z713 158 aa3.83□□□□□ -1.8
GTF3A-208ENST00000493903 TRPT1Q86TN4 253 aaKnown RBP3.83□□□□□ -1.8
GTF3A-208ENST00000493903 RBM23Q86U06 439 aaKnown RBP3.83□□□□□ -1.8
GTF3A-208ENST00000493903 FAM228AQ86W67 206 aa3.83□□□□□ -1.8
GTF3A-208ENST00000493903 CDR2LQ86X02 465 aaPredicted RBP3.83□□□□□ -1.8
GTF3A-208ENST00000493903 SPEM1Q8N4L4 309 aa3.83□□□□□ -1.8
GTF3A-208ENST00000493903 CLDN19Q8N6F1 224 aa3.83□□□□□ -1.8
GTF3A-208ENST00000493903 STPG4Q8N801 248 aa3.83□□□□□ -1.8
GTF3A-208ENST00000493903 KBTBD3Q8NAB2 608 aa3.83□□□□□ -1.8
GTF3A-208ENST00000493903 RELL2Q8NC24 303 aaPredicted RBP3.83□□□□□ -1.8
GTF3A-208ENST00000493903 KLHDC9Q8NEP7 349 aa3.83□□□□□ -1.8
GTF3A-208ENST00000493903 OR9K2Q8NGE7 335 aa3.83□□□□□ -1.8
GTF3A-208ENST00000493903 OR5D13Q8NGL4 314 aa3.83□□□□□ -1.8
GTF3A-208ENST00000493903 NANPQ8TBE9 248 aa3.83□□□□□ -1.8
GTF3A-208ENST00000493903 MAPK15Q8TD08 544 aa3.83□□□□□ -1.8
GTF3A-208ENST00000493903 DLX4Q92988 240 aaPredicted RBP3.83□□□□□ -1.8
GTF3A-208ENST00000493903 CD101Q93033 1021 aa3.83□□□□□ -1.8
GTF3A-208ENST00000493903 ADIPOR1Q96A54 375 aa3.83□□□□□ -1.8
GTF3A-208ENST00000493903 ELMO2Q96JJ3 720 aa3.83□□□□□ -1.8
GTF3A-208ENST00000493903 TGM7Q96PF1 710 aa3.83□□□□□ -1.8
GTF3A-208ENST00000493903 C1QTNF4Q9BXJ3 329 aa3.83□□□□□ -1.8
GTF3A-208ENST00000493903 HOXD1Q9GZZ0 328 aa3.83□□□□□ -1.8
GTF3A-208ENST00000493903 CRLF2Q9HC73 371 aa3.83□□□□□ -1.8
GTF3A-208ENST00000493903 NRN1Q9NPD7 142 aa3.83□□□□□ -1.8
GTF3A-208ENST00000493903 FAM114A2Q9NRY5 505 aa3.83□□□□□ -1.8
GTF3A-208ENST00000493903 UFSP2Q9NUQ7 469 aa3.83□□□□□ -1.8
GTF3A-208ENST00000493903 SPATA7Q9P0W8 599 aa3.83□□□□□ -1.8
GTF3A-208ENST00000493903 TAAR2Q9P1P5 351 aa3.83□□□□□ -1.8
GTF3A-208ENST00000493903 KLK11Q9UBX7 282 aa3.83□□□□□ -1.8
GTF3A-208ENST00000493903 CDH9Q9ULB4 789 aa3.83□□□□□ -1.8
GTF3A-208ENST00000493903 EMCNQ9ULC0 261 aa3.83□□□□□ -1.8
GTF3A-208ENST00000493903 DHRS7Q9Y394 339 aa3.83□□□□□ -1.8
GTF3A-208ENST00000493903 KLF2Q9Y5W3 355 aaPredicted RBP3.83□□□□□ -1.8
GTF3A-208ENST00000493903 TNRQ92752 1358 aa3.83□□□□□ -1.8
GTF3A-208ENST00000493903 NPHP4O75161 1426 aaPredicted RBP3.83□□□□□ -1.8
GTF3A-208ENST00000493903 CASKIN1Q8WXD9 1431 aa3.83□□□□□ -1.8
GTF3A-208ENST00000493903 KIAA1210Q9ULL0 1709 aa3.83□□□□□ -1.8
GTF3A-208ENST00000493903 XIRP1Q702N8 1843 aaKnown RBP3.82□□□□□ -1.8
GTF3A-208ENST00000493903 SETD1AO15047 1707 aaKnown RBP3.82□□□□□ -1.8
GTF3A-208ENST00000493903 PLEKHH2Q8IVE3 1493 aa3.82□□□□□ -1.8
GTF3A-208ENST00000493903 FYCO1Q9BQS8 1478 aa3.82□□□□□ -1.8
GTF3A-208ENST00000493903 NLRP1Q9C000 1473 aa3.82□□□□□ -1.8
GTF3A-208ENST00000493903 MBD5Q9P267 1494 aa3.82□□□□□ -1.8
GTF3A-208ENST00000493903 PNPLA6Q8IY17 1366 aa3.82□□□□□ -1.8
GTF3A-208ENST00000493903 WDR19Q8NEZ3 1342 aa3.82□□□□□ -1.8
GTF3A-208ENST00000493903 A0A0G2JLW4 131 aa3.82□□□□□ -1.8
GTF3A-208ENST00000493903 LRIT2A6NDA9 550 aa3.82□□□□□ -1.8
GTF3A-208ENST00000493903 DNAJC9-AS1A6NH13 148 aa3.82□□□□□ -1.8
GTF3A-208ENST00000493903 TMCO5BA8MYB1 307 aa3.82□□□□□ -1.8
GTF3A-208ENST00000493903 FAM25EA8MYX2 175 aa3.82□□□□□ -1.8
GTF3A-208ENST00000493903 H3BMH7 237 aa3.82□□□□□ -1.8
GTF3A-208ENST00000493903 PDLIM1O00151 329 aa3.82□□□□□ -1.8
GTF3A-208ENST00000493903 STX7O15400 261 aaKnown RBP3.82□□□□□ -1.8
GTF3A-208ENST00000493903 TNFSF12O43508 249 aa3.82□□□□□ -1.8
GTF3A-208ENST00000493903 DUX1O43812 170 aa3.82□□□□□ -1.8
GTF3A-208ENST00000493903 CIDEAO60543 219 aa3.82□□□□□ -1.8
GTF3A-208ENST00000493903 CDC123O75794 336 aaPredicted RBP3.82□□□□□ -1.8
GTF3A-208ENST00000493903 CALCAP01258 141 aa3.82□□□□□ -1.8
GTF3A-208ENST00000493903 ATP1A1P05023 1023 aaKnown RBP3.82□□□□□ -1.8
GTF3A-208ENST00000493903 H2AFXP16104 143 aaPredicted RBP3.82□□□□□ -1.8
GTF3A-208ENST00000493903 TBXA2RP21731 343 aa3.82□□□□□ -1.8
GTF3A-208ENST00000493903 MARK3P27448 753 aa3.82□□□□□ -1.8
GTF3A-208ENST00000493903 RPL9P32969 192 aaKnown RBP3.82□□□□□ -1.8
GTF3A-208ENST00000493903 LEPRP48357 1165 aaKnown RBP3.82□□□□□ -1.8
GTF3A-208ENST00000493903 CRYBA2P53672 197 aa3.82□□□□□ -1.8
GTF3A-208ENST00000493903 CDH4P55283 916 aa3.82□□□□□ -1.8
GTF3A-208ENST00000493903 PRMT2P55345 433 aa3.82□□□□□ -1.8
GTF3A-208ENST00000493903 ILF3Q12906 894 aaKnown RBP eCLIP3.82□□□□□ -1.8
GTF3A-208ENST00000493903 BNIP1Q12981 228 aa3.82□□□□□ -1.8
GTF3A-208ENST00000493903 PLD1Q13393 1074 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms