RNA–Protein interactions for RNA: ENST00000493732.5

NPHP3-209, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 1,933 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-209ENST00000493732 BTN3A3O00478 584 aa9.03□□□□□ -0.96
NPHP3-209ENST00000493732 TBX1O43435 398 aa9.03□□□□□ -0.96
NPHP3-209ENST00000493732 TPST2O60704 377 aa9.03□□□□□ -0.96
NPHP3-209ENST00000493732 EIF2S1P05198 315 aaKnown RBP9.03□□□□□ -0.96
NPHP3-209ENST00000493732 DBIP07108 87 aaKnown RBP9.03□□□□□ -0.96
NPHP3-209ENST00000493732 ALOX12P18054 663 aa9.03□□□□□ -0.96
NPHP3-209ENST00000493732 CTHP32929 405 aa9.03□□□□□ -0.96
NPHP3-209ENST00000493732 SOX9P48436 509 aa9.03□□□□□ -0.96
NPHP3-209ENST00000493732 ILF3Q12906 894 aaKnown RBP eCLIP9.03□□□□□ -0.96
NPHP3-209ENST00000493732 DNASE1L3Q13609 305 aa9.03□□□□□ -0.96
NPHP3-209ENST00000493732 PUS10Q3MIT2 529 aaKnown RBP9.03□□□□□ -0.96
NPHP3-209ENST00000493732 EOGTQ5NDL2 527 aa9.03□□□□□ -0.96
NPHP3-209ENST00000493732 C9orf50Q5SZB4 431 aa9.03□□□□□ -0.96
NPHP3-209ENST00000493732 STEAP3Q658P3 488 aa9.03□□□□□ -0.96
NPHP3-209ENST00000493732 ACSM5Q6NUN0 579 aa9.03□□□□□ -0.96
NPHP3-209ENST00000493732 RPL13AP3Q6NVV1 102 aa9.03□□□□□ -0.96
NPHP3-209ENST00000493732 FBXO42Q6P3S6 717 aa9.03□□□□□ -0.96
NPHP3-209ENST00000493732 MBOAT2Q6ZWT7 520 aa9.03□□□□□ -0.96
NPHP3-209ENST00000493732 PHC2Q8IXK0 858 aa9.03□□□□□ -0.96
NPHP3-209ENST00000493732 RNF113BQ8IZP6 322 aaKnown RBP9.03□□□□□ -0.96
NPHP3-209ENST00000493732 KCT2Q8NC54 265 aa9.03□□□□□ -0.96
NPHP3-209ENST00000493732 ANKK1Q8NFD2 765 aa9.03□□□□□ -0.96
NPHP3-209ENST00000493732 RNF217Q8TC41 542 aa9.03□□□□□ -0.96
NPHP3-209ENST00000493732 AP3S1Q92572 193 aa9.03□□□□□ -0.96
NPHP3-209ENST00000493732 SLC35A4Q96G79 324 aa9.03□□□□□ -0.96
NPHP3-209ENST00000493732 WDFY2Q96P53 400 aa9.03□□□□□ -0.96
NPHP3-209ENST00000493732 MCHR1Q99705 422 aa9.03□□□□□ -0.96
NPHP3-209ENST00000493732 WFDC6Q9BQY6 131 aa9.03□□□□□ -0.96
NPHP3-209ENST00000493732 MED18Q9BUE0 208 aa9.03□□□□□ -0.96
NPHP3-209ENST00000493732 PIGUQ9H490 435 aa9.03□□□□□ -0.96
NPHP3-209ENST00000493732 EQTNQ9NQ60 294 aa9.03□□□□□ -0.96
NPHP3-209ENST00000493732 TRPV5Q9NQA5 729 aa9.03□□□□□ -0.96
NPHP3-209ENST00000493732 POLE3Q9NRF9 147 aa9.03□□□□□ -0.96
NPHP3-209ENST00000493732 POT1Q9NUX5 634 aa9.03□□□□□ -0.96
NPHP3-209ENST00000493732 IL20Q9NYY1 176 aa9.03□□□□□ -0.96
NPHP3-209ENST00000493732 KCMF1Q9P0J7 381 aa9.03□□□□□ -0.96
NPHP3-209ENST00000493732 ZNF624Q9P2J8 865 aaPredicted RBP9.03□□□□□ -0.96
NPHP3-209ENST00000493732 SATB2Q9UPW6 733 aa9.03□□□□□ -0.96
NPHP3-209ENST00000493732 ZNF443Q9Y2A4 671 aaPredicted RBP9.03□□□□□ -0.96
NPHP3-209ENST00000493732 HS3ST3A1Q9Y663 406 aa9.03□□□□□ -0.96
NPHP3-209ENST00000493732 SLC22A7Q9Y694 548 aa9.03□□□□□ -0.96
NPHP3-209ENST00000493732 SLC35F4A4IF30 521 aa9.03□□□□□ -0.96
NPHP3-209ENST00000493732 POM121BA6NF01 834 aa9.03□□□□□ -0.96
NPHP3-209ENST00000493732 C2orf74A8MZ97 194 aa9.03□□□□□ -0.96
NPHP3-209ENST00000493732 SLC30A4O14863 429 aa9.03□□□□□ -0.96
NPHP3-209ENST00000493732 FMO6PO60774 539 aa9.03□□□□□ -0.96
NPHP3-209ENST00000493732 ADAM23O75077 832 aa9.03□□□□□ -0.96
NPHP3-209ENST00000493732 STATHP02808 62 aa9.03□□□□□ -0.96
NPHP3-209ENST00000493732 IGFBP1P08833 259 aaPredicted RBP9.03□□□□□ -0.96
NPHP3-209ENST00000493732 HBQ1P09105 142 aa9.03□□□□□ -0.96
NPHP3-209ENST00000493732 GAAP10253 952 aa9.03□□□□□ -0.96
NPHP3-209ENST00000493732 ALPPL2P10696 532 aa9.03□□□□□ -0.96
NPHP3-209ENST00000493732 CKMT1AP12532 417 aa9.03□□□□□ -0.96
NPHP3-209ENST00000493732 CPMP14384 443 aa9.03□□□□□ -0.96
NPHP3-209ENST00000493732 HOXB3P14651 431 aaPredicted RBP9.03□□□□□ -0.96
NPHP3-209ENST00000493732 CRYBB2P43320 205 aa9.03□□□□□ -0.96
NPHP3-209ENST00000493732 OMPP47874 163 aa9.03□□□□□ -0.96
NPHP3-209ENST00000493732 DGKEP52429 567 aa9.03□□□□□ -0.96
NPHP3-209ENST00000493732 SRP54P61011 504 aaKnown RBP9.03□□□□□ -0.96
NPHP3-209ENST00000493732 PPP2CBP62714 309 aa9.03□□□□□ -0.96
NPHP3-209ENST00000493732 PPP2CAP67775 309 aa9.03□□□□□ -0.96
NPHP3-209ENST00000493732 DUSP2Q05923 314 aa9.03□□□□□ -0.96
NPHP3-209ENST00000493732 HYAL1Q12794 435 aa9.03□□□□□ -0.96
NPHP3-209ENST00000493732 TPBGQ13641 420 aa9.03□□□□□ -0.96
NPHP3-209ENST00000493732 DSG2Q14126 1118 aa9.03□□□□□ -0.96
NPHP3-209ENST00000493732 ZNF750Q32MQ0 723 aa9.03□□□□□ -0.96
NPHP3-209ENST00000493732 PLK5Q496M5 336 aa9.03□□□□□ -0.96
NPHP3-209ENST00000493732 FIGLAQ6QHK4 219 aa9.03□□□□□ -0.96
NPHP3-209ENST00000493732 HSDL2Q6YN16 418 aa9.03□□□□□ -0.96
NPHP3-209ENST00000493732 COMTD1Q86VU5 262 aa9.03□□□□□ -0.96
NPHP3-209ENST00000493732 VRK2Q86Y07 508 aa9.03□□□□□ -0.96
NPHP3-209ENST00000493732 IQCF1Q8N6M8 205 aa9.03□□□□□ -0.96
NPHP3-209ENST00000493732 CDRT4Q8N9R6 151 aa9.03□□□□□ -0.96
NPHP3-209ENST00000493732 KAT2AQ92830 837 aa9.03□□□□□ -0.96
NPHP3-209ENST00000493732 UFD1Q92890 307 aa9.03□□□□□ -0.96
NPHP3-209ENST00000493732 FGF11Q92914 225 aa9.03□□□□□ -0.96
NPHP3-209ENST00000493732 RNFT2Q96EX2 444 aa9.03□□□□□ -0.96
NPHP3-209ENST00000493732 KCTD7Q96MP8 289 aa9.03□□□□□ -0.96
NPHP3-209ENST00000493732 SLC6A18Q96N87 628 aa9.03□□□□□ -0.96
NPHP3-209ENST00000493732 OR2A14Q96R47 310 aa9.03□□□□□ -0.96
NPHP3-209ENST00000493732 STACQ99469 402 aa9.03□□□□□ -0.96
NPHP3-209ENST00000493732 ZFYVE21Q9BQ24 234 aa9.03□□□□□ -0.96
NPHP3-209ENST00000493732 C8orf33Q9H7E9 229 aaPredicted RBP9.03□□□□□ -0.96
NPHP3-209ENST00000493732 SLC28A3Q9HAS3 691 aa9.03□□□□□ -0.96
NPHP3-209ENST00000493732 SMURF1Q9HCE7 757 aa9.03□□□□□ -0.96
NPHP3-209ENST00000493732 DUSP22Q9NRW4 184 aa9.03□□□□□ -0.96
NPHP3-209ENST00000493732 H2AFY2Q9P0M6 372 aaPredicted RBP9.03□□□□□ -0.96
NPHP3-209ENST00000493732 CLEC2DQ9UHP7 191 aa9.03□□□□□ -0.96
NPHP3-209ENST00000493732 C19orf53Q9UNZ5 99 aaPredicted RBP9.03□□□□□ -0.96
NPHP3-209ENST00000493732 NINQ8N4C6 2090 aa9.03□□□□□ -0.96
NPHP3-209ENST00000493732 DOCK8Q8NF50 2099 aa9.03□□□□□ -0.96
NPHP3-209ENST00000493732 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.02□□□□□ -0.97
NPHP3-209ENST00000493732 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.02□□□□□ -0.97
NPHP3-209ENST00000493732 A6NCN8 305 aa9.02□□□□□ -0.97
NPHP3-209ENST00000493732 CPSF4LA6NMK7 179 aaKnown RBP9.02□□□□□ -0.97
NPHP3-209ENST00000493732 PLOD3O60568 738 aa9.02□□□□□ -0.97
NPHP3-209ENST00000493732 STX11O75558 287 aa9.02□□□□□ -0.97
NPHP3-209ENST00000493732 UGT2B7P16662 529 aa9.02□□□□□ -0.97
NPHP3-209ENST00000493732 MAGP20916 626 aa9.02□□□□□ -0.97
NPHP3-209ENST00000493732 SOX3P41225 446 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms