RNA–Protein interactions for RNA: ENST00000493582.5

HDAC4-210, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 3,188 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-210ENST00000493582 COMTD1Q86VU5 262 aa11.01□□□□□ -0.65
HDAC4-210ENST00000493582 PAQR7Q86WK9 346 aa11.01□□□□□ -0.65
HDAC4-210ENST00000493582 LURAP1LQ8IV03 231 aa11.01□□□□□ -0.65
HDAC4-210ENST00000493582 GPR26Q8NDV2 337 aa11.01□□□□□ -0.65
HDAC4-210ENST00000493582 THAP4Q8WY91 577 aa11.01□□□□□ -0.65
HDAC4-210ENST00000493582 PPCDCQ96CD2 204 aa11.01□□□□□ -0.65
HDAC4-210ENST00000493582 CA10Q9NS85 328 aa11.01□□□□□ -0.65
HDAC4-210ENST00000493582 SIRT4Q9Y6E7 314 aaPredicted RBP11.01□□□□□ -0.65
HDAC4-210ENST00000493582 MYO10Q9HD67 2058 aa11.01□□□□□ -0.65
HDAC4-210ENST00000493582 PLSCR5A0PG75 271 aa11.01□□□□□ -0.65
HDAC4-210ENST00000493582 M0R3H8 397 aa11.01□□□□□ -0.65
HDAC4-210ENST00000493582 GPR37L1O60883 481 aa11.01□□□□□ -0.65
HDAC4-210ENST00000493582 PEPDP12955 493 aa11.01□□□□□ -0.65
HDAC4-210ENST00000493582 NFYAP23511 347 aaPredicted RBP11.01□□□□□ -0.65
HDAC4-210ENST00000493582 MAOBP27338 520 aa11.01□□□□□ -0.65
HDAC4-210ENST00000493582 NSG1P42857 185 aa11.01□□□□□ -0.65
HDAC4-210ENST00000493582 PSEN2P49810 448 aa11.01□□□□□ -0.65
HDAC4-210ENST00000493582 NAE1Q13564 534 aa11.01□□□□□ -0.65
HDAC4-210ENST00000493582 PYHIN1Q6K0P9 492 aa11.01□□□□□ -0.65
HDAC4-210ENST00000493582 SERPINA13PQ6UXR4 307 aa11.01□□□□□ -0.65
HDAC4-210ENST00000493582 OLIG3Q7RTU3 272 aa11.01□□□□□ -0.65
HDAC4-210ENST00000493582 HORMAD2Q8N7B1 307 aa11.01□□□□□ -0.65
HDAC4-210ENST00000493582 TRMT10AQ8TBZ6 339 aaKnown RBP11.01□□□□□ -0.65
HDAC4-210ENST00000493582 TMEM19Q96HH6 336 aa11.01□□□□□ -0.65
HDAC4-210ENST00000493582 SUSD3Q96L08 255 aa11.01□□□□□ -0.65
HDAC4-210ENST00000493582 MRPS18AQ9NVS2 196 aaKnown RBP11.01□□□□□ -0.65
HDAC4-210ENST00000493582 ING1Q9UK53 422 aaPredicted RBP11.01□□□□□ -0.65
HDAC4-210ENST00000493582 CBLCQ9ULV8 474 aa11.01□□□□□ -0.65
HDAC4-210ENST00000493582 CHST2Q9Y4C5 530 aa11.01□□□□□ -0.65
HDAC4-210ENST00000493582 A0A0B4J203 849 aa11□□□□□ -0.65
HDAC4-210ENST00000493582 A0A1W2PRB8 838 aa11□□□□□ -0.65
HDAC4-210ENST00000493582 ANKDD1BA6NHY2 528 aa11□□□□□ -0.65
HDAC4-210ENST00000493582 AIPO00170 330 aa11□□□□□ -0.65
HDAC4-210ENST00000493582 MID1O15344 667 aa11□□□□□ -0.65
HDAC4-210ENST00000493582 MTX2O75431 263 aa11□□□□□ -0.65
HDAC4-210ENST00000493582 CBSLP0DN79 551 aa11□□□□□ -0.65
HDAC4-210ENST00000493582 CBSP35520 551 aa11□□□□□ -0.65
HDAC4-210ENST00000493582 VEGFCP49767 419 aa11□□□□□ -0.65
HDAC4-210ENST00000493582 CDH11P55287 796 aa11□□□□□ -0.65
HDAC4-210ENST00000493582 DUSP4Q13115 394 aa11□□□□□ -0.65
HDAC4-210ENST00000493582 MELKQ14680 651 aa11□□□□□ -0.65
HDAC4-210ENST00000493582 SLC25A35Q3KQZ1 300 aa11□□□□□ -0.65
HDAC4-210ENST00000493582 MINDY4Q4G0A6 757 aa11□□□□□ -0.65
HDAC4-210ENST00000493582 ZNF772Q68DY9 489 aaPredicted RBP11□□□□□ -0.65
HDAC4-210ENST00000493582 OR56B4Q8NH76 319 aa11□□□□□ -0.65
HDAC4-210ENST00000493582 FANK1Q8TC84 345 aa11□□□□□ -0.65
HDAC4-210ENST00000493582 HMGB4Q8WW32 186 aa11□□□□□ -0.65
HDAC4-210ENST00000493582 SMG9Q9H0W8 520 aaKnown RBP11□□□□□ -0.65
HDAC4-210ENST00000493582 OR10A4Q9H209 315 aa11□□□□□ -0.65
HDAC4-210ENST00000493582 LHX3Q9UBR4 397 aa11□□□□□ -0.65
HDAC4-210ENST00000493582 RPS6KB2Q9UBS0 482 aa11□□□□□ -0.65
HDAC4-210ENST00000493582 POLR2AP24928 1970 aaKnown RBP11□□□□□ -0.65
HDAC4-210ENST00000493582 SLC9B1P1A6NJY1 282 aa11□□□□□ -0.65
HDAC4-210ENST00000493582 SELENOFO60613 162 aa11□□□□□ -0.65
HDAC4-210ENST00000493582 EFCAB14O75071 495 aa11□□□□□ -0.65
HDAC4-210ENST00000493582 NTN1O95631 604 aa11□□□□□ -0.65
HDAC4-210ENST00000493582 C8GP07360 202 aa11□□□□□ -0.65
HDAC4-210ENST00000493582 FURINP09958 794 aa11□□□□□ -0.65
HDAC4-210ENST00000493582 POLR2GP62487 172 aaKnown RBP eCLIP11□□□□□ -0.65
HDAC4-210ENST00000493582 FZD5Q13467 585 aa11□□□□□ -0.65
HDAC4-210ENST00000493582 FGL2Q14314 439 aa11□□□□□ -0.65
HDAC4-210ENST00000493582 HIST2H2AA3Q6FI13 130 aa11□□□□□ -0.65
HDAC4-210ENST00000493582 SFXN4Q6P4A7 337 aa11□□□□□ -0.65
HDAC4-210ENST00000493582 METTL3Q86U44 580 aaKnown RBP11□□□□□ -0.65
HDAC4-210ENST00000493582 C20orf85Q9H1P6 137 aa11□□□□□ -0.65
HDAC4-210ENST00000493582 EVA1AQ9H8M9 152 aa11□□□□□ -0.65
HDAC4-210ENST00000493582 KLHL1Q9NR64 748 aa11□□□□□ -0.65
HDAC4-210ENST00000493582 MED9Q9NWA0 146 aa11□□□□□ -0.65
HDAC4-210ENST00000493582 A4GNTQ9UNA3 340 aa11□□□□□ -0.65
HDAC4-210ENST00000493582 A0A0C4DFX4 3053 aa11□□□□□ -0.65
HDAC4-210ENST00000493582 TRABD2BA6NFA1 517 aa11□□□□□ -0.65
HDAC4-210ENST00000493582 MCRIP1C9JLW8 97 aa11□□□□□ -0.65
HDAC4-210ENST00000493582 PEX14O75381 377 aa11□□□□□ -0.65
HDAC4-210ENST00000493582 TGFB1P01137 390 aa11□□□□□ -0.65
HDAC4-210ENST00000493582 UGT2B7P16662 529 aa11□□□□□ -0.65
HDAC4-210ENST00000493582 TAS2R50P59544 299 aa11□□□□□ -0.65
HDAC4-210ENST00000493582 RING1Q06587 406 aa11□□□□□ -0.65
HDAC4-210ENST00000493582 ZNF763Q0D2J5 394 aa11□□□□□ -0.65
HDAC4-210ENST00000493582 MRPL58Q14197 206 aaKnown RBP11□□□□□ -0.65
HDAC4-210ENST00000493582 HLXQ14774 488 aaPredicted RBP11□□□□□ -0.65
HDAC4-210ENST00000493582 KCNA10Q16322 511 aa11□□□□□ -0.65
HDAC4-210ENST00000493582 CCSMST1Q4G0I0 132 aa11□□□□□ -0.65
HDAC4-210ENST00000493582 IZUMO1Q8IYV9 350 aa11□□□□□ -0.65
HDAC4-210ENST00000493582 KLHL36Q8N4N3 616 aa11□□□□□ -0.65
HDAC4-210ENST00000493582 MRPS24Q96EL2 167 aaKnown RBP11□□□□□ -0.65
HDAC4-210ENST00000493582 LRRC46Q96FV0 321 aa11□□□□□ -0.65
HDAC4-210ENST00000493582 SLC38A3Q99624 504 aa11□□□□□ -0.65
HDAC4-210ENST00000493582 ZNF649Q9BS31 505 aa11□□□□□ -0.65
HDAC4-210ENST00000493582 GSDMCQ9BYG8 508 aa11□□□□□ -0.65
HDAC4-210ENST00000493582 ESRP2Q9H6T0 727 aaKnown RBP11□□□□□ -0.65
HDAC4-210ENST00000493582 CXorf36Q9H7Y0 433 aa11□□□□□ -0.65
HDAC4-210ENST00000493582 PIPOXQ9P0Z9 390 aa11□□□□□ -0.65
HDAC4-210ENST00000493582 MGAT4CQ9UBM8 478 aa11□□□□□ -0.65
HDAC4-210ENST00000493582 NOD1Q9Y239 953 aa11□□□□□ -0.65
HDAC4-210ENST00000493582 CHD5Q8TDI0 1954 aa10.99□□□□□ -0.65
HDAC4-210ENST00000493582 C17orf102A2RUQ5 167 aa10.99□□□□□ -0.65
HDAC4-210ENST00000493582 ARPC5O15511 151 aa10.99□□□□□ -0.65
HDAC4-210ENST00000493582 TBXA2RP21731 343 aa10.99□□□□□ -0.65
HDAC4-210ENST00000493582 HOXA1P49639 335 aaPredicted RBP10.99□□□□□ -0.65
HDAC4-210ENST00000493582 E2F1Q01094 437 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms