RNA–Protein interactions for RNA: ENST00000493026.2

PSMD11-205, Transcript of proteasome 26S subunit, non-ATPase 11, human

TSL 2

Gene PSMD11, Length 2,387 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMD11-205	ENST00000493026	BMPR1A	P36894	532 aa		11.98	□□□□□ -0.49
PSMD11-205	ENST00000493026	RFX2	P48378	723 aa		11.98	□□□□□ -0.49
PSMD11-205	ENST00000493026	WNT4	P56705	351 aa		11.98	□□□□□ -0.49
PSMD11-205	ENST00000493026	IFITM2	Q01629	132 aa		11.98	□□□□□ -0.49
PSMD11-205	ENST00000493026	TMEM44	Q2T9K0	475 aa		11.98	□□□□□ -0.49
PSMD11-205	ENST00000493026	FAM46C	Q5VWP2	391 aa		11.98	□□□□□ -0.49
PSMD11-205	ENST00000493026	RPUSD3	Q6P087	351 aa	Known RBP	11.98	□□□□□ -0.49
PSMD11-205	ENST00000493026	LAPTM4B	Q86VI4	370 aa		11.98	□□□□□ -0.49
PSMD11-205	ENST00000493026	RBM45	Q8IUH3	476 aa	Known RBP	11.98	□□□□□ -0.49
PSMD11-205	ENST00000493026	CELF5	Q8N6W0	485 aa	Known RBP	11.98	□□□□□ -0.49
PSMD11-205	ENST00000493026	ZNF366	Q8N895	744 aa		11.98	□□□□□ -0.49
PSMD11-205	ENST00000493026	MORN4	Q8NDC4	146 aa		11.98	□□□□□ -0.49
PSMD11-205	ENST00000493026	VANGL1	Q8TAA9	524 aa	Predicted RBP	11.98	□□□□□ -0.49
PSMD11-205	ENST00000493026	SUN3	Q8TAQ9	357 aa		11.98	□□□□□ -0.49
PSMD11-205	ENST00000493026	EXOSC8	Q96B26	276 aa	Known RBP	11.98	□□□□□ -0.49
PSMD11-205	ENST00000493026	ERLEC1	Q96DZ1	483 aa		11.98	□□□□□ -0.49
PSMD11-205	ENST00000493026	LRR1	Q96L50	414 aa		11.98	□□□□□ -0.49
PSMD11-205	ENST00000493026	KCTD7	Q96MP8	289 aa		11.98	□□□□□ -0.49
PSMD11-205	ENST00000493026	ZNF582	Q96NG8	517 aa	Predicted RBP	11.98	□□□□□ -0.49
PSMD11-205	ENST00000493026	AMDHD1	Q96NU7	426 aa		11.98	□□□□□ -0.49
PSMD11-205	ENST00000493026	ACAT2	Q9BWD1	397 aa		11.98	□□□□□ -0.49
PSMD11-205	ENST00000493026	SLC22A4	Q9H015	551 aa		11.98	□□□□□ -0.49
PSMD11-205	ENST00000493026	OR51I1	Q9H343	314 aa		11.98	□□□□□ -0.49
PSMD11-205	ENST00000493026	ANKRD19P	Q9H560	264 aa		11.98	□□□□□ -0.49
PSMD11-205	ENST00000493026	ZNF576	Q9H609	170 aa		11.98	□□□□□ -0.49
PSMD11-205	ENST00000493026	CNTD2	Q9H8S5	307 aa		11.98	□□□□□ -0.49
PSMD11-205	ENST00000493026	MAN2C1	Q9NTJ4	1040 aa		11.98	□□□□□ -0.49
PSMD11-205	ENST00000493026	ZBTB32	Q9Y2Y4	487 aa	Predicted RBP	11.98	□□□□□ -0.49
PSMD11-205	ENST00000493026	TMEM98	Q9Y2Y6	226 aa		11.98	□□□□□ -0.49
PSMD11-205	ENST00000493026	PRAMEF27	A3QJZ7	478 aa		11.97	□□□□□ -0.49
PSMD11-205	ENST00000493026	OR12D1	P0DN82	309 aa		11.97	□□□□□ -0.49
PSMD11-205	ENST00000493026	FGF9	P31371	208 aa	Predicted RBP	11.97	□□□□□ -0.49
PSMD11-205	ENST00000493026	HTRA4	P83105	476 aa	Predicted RBP	11.97	□□□□□ -0.49
PSMD11-205	ENST00000493026	SYPL1	Q16563	259 aa		11.97	□□□□□ -0.49
PSMD11-205	ENST00000493026	CARTPT	Q16568	116 aa		11.97	□□□□□ -0.49
PSMD11-205	ENST00000493026	DDI2	Q5TDH0	399 aa		11.97	□□□□□ -0.49
PSMD11-205	ENST00000493026	LIPK	Q5VXJ0	399 aa		11.97	□□□□□ -0.49
PSMD11-205	ENST00000493026	OR4C11	Q6IEV9	310 aa		11.97	□□□□□ -0.49
PSMD11-205	ENST00000493026	UBE3D	Q7Z6J8	389 aa		11.97	□□□□□ -0.49
PSMD11-205	ENST00000493026	LAX1	Q8IWV1	398 aa		11.97	□□□□□ -0.49
PSMD11-205	ENST00000493026	TRMT61A	Q96FX7	289 aa	Known RBP	11.97	□□□□□ -0.49
PSMD11-205	ENST00000493026	ZSWIM3	Q96MP5	696 aa		11.97	□□□□□ -0.49
PSMD11-205	ENST00000493026	PINK1	Q9BXM7	581 aa		11.97	□□□□□ -0.49
PSMD11-205	ENST00000493026	HDAC8	Q9BY41	377 aa		11.97	□□□□□ -0.49
PSMD11-205	ENST00000493026	SLC35C2	Q9NQQ7	365 aa		11.97	□□□□□ -0.49
PSMD11-205	ENST00000493026	EXOSC1	Q9Y3B2	195 aa	Known RBP	11.97	□□□□□ -0.49
PSMD11-205	ENST00000493026	HMX3	A6NHT5	357 aa		11.97	□□□□□ -0.49
PSMD11-205	ENST00000493026	GUCY1B2	O75343	617 aa		11.97	□□□□□ -0.49
PSMD11-205	ENST00000493026	PTBP1	P26599	531 aa	Known RBP eCLIP	11.97	□□□□□ -0.49	7e-14	■□□□□ 9.3
PSMD11-205	ENST00000493026	NTS	P30990	170 aa		11.97	□□□□□ -0.49
PSMD11-205	ENST00000493026	METAP1	P53582	386 aa		11.97	□□□□□ -0.49
PSMD11-205	ENST00000493026	GAS1	P54826	345 aa		11.97	□□□□□ -0.49
PSMD11-205	ENST00000493026	C17orf67	Q0P5P2	114 aa		11.97	□□□□□ -0.49
PSMD11-205	ENST00000493026	SF3B4	Q15427	424 aa	Known RBP eCLIP	11.97	□□□□□ -0.49	4e-7	■■■■□ 19.6
PSMD11-205	ENST00000493026	CD200R1L	Q6Q8B3	271 aa		11.97	□□□□□ -0.49
PSMD11-205	ENST00000493026	TMEM163	Q8TC26	289 aa		11.97	□□□□□ -0.49
PSMD11-205	ENST00000493026	XAGE5	Q8WWM1	108 aa		11.97	□□□□□ -0.49
PSMD11-205	ENST00000493026	GLIPR2	Q9H4G4	154 aa		11.97	□□□□□ -0.49
PSMD11-205	ENST00000493026	MVB12B	Q9H7P6	319 aa		11.97	□□□□□ -0.49
PSMD11-205	ENST00000493026	ACSL5	Q9ULC5	683 aa		11.97	□□□□□ -0.49
PSMD11-205	ENST00000493026	PLAGL1	Q9UM63	463 aa		11.97	□□□□□ -0.49
PSMD11-205	ENST00000493026		A0A1W2PPV9	198 aa		11.96	□□□□□ -0.49
PSMD11-205	ENST00000493026		H7BY64	318 aa		11.96	□□□□□ -0.49
PSMD11-205	ENST00000493026	SLC30A4	O14863	429 aa		11.96	□□□□□ -0.49
PSMD11-205	ENST00000493026	CDRT1	O95170	752 aa		11.96	□□□□□ -0.49
PSMD11-205	ENST00000493026	TSPAN19	P0C672	248 aa		11.96	□□□□□ -0.49
PSMD11-205	ENST00000493026	ERVFC1	P60507	584 aa		11.96	□□□□□ -0.49
PSMD11-205	ENST00000493026	SMAD4	Q13485	552 aa	Known RBP	11.96	□□□□□ -0.49
PSMD11-205	ENST00000493026	UAP1L1	Q3KQV9	507 aa		11.96	□□□□□ -0.49
PSMD11-205	ENST00000493026	PLPP4	Q5VZY2	271 aa		11.96	□□□□□ -0.49
PSMD11-205	ENST00000493026	KIAA1161	Q6NSJ0	714 aa		11.96	□□□□□ -0.49
PSMD11-205	ENST00000493026	SLC27A4	Q6P1M0	643 aa		11.96	□□□□□ -0.49
PSMD11-205	ENST00000493026	SLC36A4	Q6YBV0	504 aa		11.96	□□□□□ -0.49
PSMD11-205	ENST00000493026	PLA2G15	Q8NCC3	412 aa		11.96	□□□□□ -0.49
PSMD11-205	ENST00000493026	CXorf40A	Q8TE69	158 aa		11.96	□□□□□ -0.49
PSMD11-205	ENST00000493026	PRAP1	Q96NZ9	151 aa		11.96	□□□□□ -0.49
PSMD11-205	ENST00000493026	RNF208	Q9H0X6	261 aa		11.96	□□□□□ -0.49
PSMD11-205	ENST00000493026	TP63	Q9H3D4	680 aa	Predicted RBP	11.96	□□□□□ -0.49
PSMD11-205	ENST00000493026	ZCCHC3	Q9NUD5	404 aa	Known RBP	11.96	□□□□□ -0.49
PSMD11-205	ENST00000493026	TEX10	Q9NXF1	929 aa	Predicted RBP	11.96	□□□□□ -0.49
PSMD11-205	ENST00000493026	PLEKHB1	Q9UF11	243 aa	Predicted RBP	11.96	□□□□□ -0.49
PSMD11-205	ENST00000493026	EDAR	Q9UNE0	448 aa		11.96	□□□□□ -0.49
PSMD11-205	ENST00000493026	GSTK1	Q9Y2Q3	226 aa		11.96	□□□□□ -0.49
PSMD11-205	ENST00000493026	N6AMT1	Q9Y5N5	214 aa		11.96	□□□□□ -0.49
PSMD11-205	ENST00000493026	HIDE1	A8MVS5	230 aa		11.96	□□□□□ -0.5
PSMD11-205	ENST00000493026	IDH3B	O43837	385 aa		11.96	□□□□□ -0.5
PSMD11-205	ENST00000493026	TIMP1	P01033	207 aa		11.96	□□□□□ -0.5
PSMD11-205	ENST00000493026	MSL3P1	P0C860	447 aa		11.96	□□□□□ -0.5
PSMD11-205	ENST00000493026	GABRA5	P31644	462 aa		11.96	□□□□□ -0.5
PSMD11-205	ENST00000493026	GPC1	P35052	558 aa		11.96	□□□□□ -0.5
PSMD11-205	ENST00000493026	ETV5	P41161	510 aa		11.96	□□□□□ -0.5
PSMD11-205	ENST00000493026	NR4A2	P43354	598 aa		11.96	□□□□□ -0.5
PSMD11-205	ENST00000493026	ETV1	P50549	477 aa		11.96	□□□□□ -0.5
PSMD11-205	ENST00000493026	DGKE	P52429	567 aa		11.96	□□□□□ -0.5
PSMD11-205	ENST00000493026	TAS2R38	P59533	333 aa		11.96	□□□□□ -0.5
PSMD11-205	ENST00000493026	CSNK1G2	P78368	415 aa		11.96	□□□□□ -0.5
PSMD11-205	ENST00000493026	SNAPC1	Q16533	368 aa		11.96	□□□□□ -0.5
PSMD11-205	ENST00000493026	BAK1	Q16611	211 aa		11.96	□□□□□ -0.5
PSMD11-205	ENST00000493026	ATAD3C	Q5T2N8	411 aa		11.96	□□□□□ -0.5
PSMD11-205	ENST00000493026	NDUFAF5	Q5TEU4	345 aa		11.96	□□□□□ -0.5

Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms