RNA–Protein interactions for RNA: ENST00000491330.1

PDLIM2-217, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-217ENST00000491330 KIR2DL3P43628 341 aa15.11■□□□□ 0.01
PDLIM2-217ENST00000491330 ASCL1P50553 236 aa15.11■□□□□ 0.01
PDLIM2-217ENST00000491330 DGKQP52824 942 aa15.11■□□□□ 0.01
PDLIM2-217ENST00000491330 EIPR1Q53HC9 387 aa15.11■□□□□ 0.01
PDLIM2-217ENST00000491330 FBXW10Q5XX13 1052 aa15.11■□□□□ 0.01
PDLIM2-217ENST00000491330 FAM71E1Q6IPT2 247 aa15.11■□□□□ 0.01
PDLIM2-217ENST00000491330 ARSKQ6UWY0 536 aa15.11■□□□□ 0.01
PDLIM2-217ENST00000491330 LRIG3Q6UXM1 1119 aa15.11■□□□□ 0.01
PDLIM2-217ENST00000491330 YRDCQ86U90 279 aaKnown RBP15.11■□□□□ 0.01
PDLIM2-217ENST00000491330 DDIASQ8IXT1 998 aa15.11■□□□□ 0.01
PDLIM2-217ENST00000491330 PPP1R14CQ8TAE6 165 aa15.11■□□□□ 0.01
PDLIM2-217ENST00000491330 ZPLD1Q8TCW7 415 aa15.11■□□□□ 0.01
PDLIM2-217ENST00000491330 TCP10LQ8TDR4 215 aa15.11■□□□□ 0.01
PDLIM2-217ENST00000491330 PPCDCQ96CD2 204 aa15.11■□□□□ 0.01
PDLIM2-217ENST00000491330 ZBED6CLQ96FA7 236 aaPredicted RBP15.11■□□□□ 0.01
PDLIM2-217ENST00000491330 ZNF764Q96H86 408 aaPredicted RBP15.11■□□□□ 0.01
PDLIM2-217ENST00000491330 VSTM2LQ96N03 204 aa15.11■□□□□ 0.01
PDLIM2-217ENST00000491330 SFXN2Q96NB2 322 aa15.11■□□□□ 0.01
PDLIM2-217ENST00000491330 FAM111AQ96PZ2 611 aa15.11■□□□□ 0.01
PDLIM2-217ENST00000491330 TREX2Q9BQ50 279 aaPredicted RBP15.11■□□□□ 0.01
PDLIM2-217ENST00000491330 UGT2B28Q9BY64 529 aa15.11■□□□□ 0.01
PDLIM2-217ENST00000491330 SERHLQ9NQF3 203 aa15.11■□□□□ 0.01
PDLIM2-217ENST00000491330 PPP4R1LQ9P1A2 415 aa15.11■□□□□ 0.01
PDLIM2-217ENST00000491330 C19orf53Q9UNZ5 99 aaPredicted RBP15.11■□□□□ 0.01
PDLIM2-217ENST00000491330 MRPS18CQ9Y3D5 142 aaKnown RBP15.11■□□□□ 0.01
PDLIM2-217ENST00000491330 FIS1Q9Y3D6 152 aa15.11■□□□□ 0.01
PDLIM2-217ENST00000491330 GTF3C1Q12789 2109 aa15.11■□□□□ 0.01
PDLIM2-217ENST00000491330 LINC01387J3KSC0 135 aa15.1■□□□□ 0.01
PDLIM2-217ENST00000491330 SYT5O00445 386 aa15.1■□□□□ 0.01
PDLIM2-217ENST00000491330 PLOD2O00469 737 aa15.1■□□□□ 0.01
PDLIM2-217ENST00000491330 PDPK1O15530 556 aa15.1■□□□□ 0.01
PDLIM2-217ENST00000491330 CPN1P15169 458 aa15.1■□□□□ 0.01
PDLIM2-217ENST00000491330 CTSSP25774 331 aa15.1■□□□□ 0.01
PDLIM2-217ENST00000491330 MANFP55145 182 aaKnown RBP15.1■□□□□ 0.01
PDLIM2-217ENST00000491330 FOXA1P55317 472 aa15.1■□□□□ 0.01
PDLIM2-217ENST00000491330 GAB1Q13480 694 aa15.1■□□□□ 0.01
PDLIM2-217ENST00000491330 CDH24Q86UP0 819 aa15.1■□□□□ 0.01
PDLIM2-217ENST00000491330 ACBD4Q8NC06 268 aa15.1■□□□□ 0.01
PDLIM2-217ENST00000491330 GOT1L1Q8NHS2 421 aaPredicted RBP15.1■□□□□ 0.01
PDLIM2-217ENST00000491330 PGM2Q96G03 612 aa15.1■□□□□ 0.01
PDLIM2-217ENST00000491330 PRPF18Q99633 342 aaKnown RBP15.1■□□□□ 0.01
PDLIM2-217ENST00000491330 GATA5Q9BWX5 397 aaPredicted RBP15.1■□□□□ 0.01
PDLIM2-217ENST00000491330 GALNT9Q9HCQ5 603 aa15.1■□□□□ 0.01
PDLIM2-217ENST00000491330 SH3BP4Q9P0V3 963 aa15.1■□□□□ 0.01
PDLIM2-217ENST00000491330 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.1■□□□□ 0.01
PDLIM2-217ENST00000491330 CBLCQ9ULV8 474 aa15.1■□□□□ 0.01
PDLIM2-217ENST00000491330 ABCG2Q9UNQ0 655 aa15.1■□□□□ 0.01
PDLIM2-217ENST00000491330 V9GYY5 206 aaPredicted RBP15.1■□□□□ 0.01
PDLIM2-217ENST00000491330 C2orf72A6NCS6 295 aa15.09■□□□□ 0.01
PDLIM2-217ENST00000491330 CTIFO43310 598 aaKnown RBP15.09■□□□□ 0.01
PDLIM2-217ENST00000491330 TYROBPO43914 113 aa15.09■□□□□ 0.01
PDLIM2-217ENST00000491330 CT45A8P0DMV1 189 aa15.09■□□□□ 0.01
PDLIM2-217ENST00000491330 CT45A9P0DMV2 189 aa15.09■□□□□ 0.01
PDLIM2-217ENST00000491330 PRPS2P11908 318 aa15.09■□□□□ 0.01
PDLIM2-217ENST00000491330 HPGDP15428 266 aa15.09■□□□□ 0.01
PDLIM2-217ENST00000491330 IGFBP2P18065 325 aa15.09■□□□□ 0.01
PDLIM2-217ENST00000491330 DPP4P27487 766 aa15.09■□□□□ 0.01
PDLIM2-217ENST00000491330 ADH7P40394 386 aa15.09■□□□□ 0.01
PDLIM2-217ENST00000491330 MC3RP41968 323 aa15.09■□□□□ 0.01
PDLIM2-217ENST00000491330 DIO3P55073 304 aa15.09■□□□□ 0.01
PDLIM2-217ENST00000491330 DSCR4P56555 118 aaPredicted RBP15.09■□□□□ 0.01
PDLIM2-217ENST00000491330 CORO7P57737 925 aa15.09■□□□□ 0.01
PDLIM2-217ENST00000491330 SRYQ05066 204 aa15.09■□□□□ 0.01
PDLIM2-217ENST00000491330 DUSP2Q05923 314 aa15.09■□□□□ 0.01
PDLIM2-217ENST00000491330 TFF3Q07654 80 aa15.09■□□□□ 0.01
PDLIM2-217ENST00000491330 ZNF844Q08AG5 666 aa15.09■□□□□ 0.01
PDLIM2-217ENST00000491330 CT45A2Q5DJT8 189 aa15.09■□□□□ 0.01
PDLIM2-217ENST00000491330 FNDC7Q5VTL7 733 aa15.09■□□□□ 0.01
PDLIM2-217ENST00000491330 CLEC6AQ6EIG7 209 aa15.09■□□□□ 0.01
PDLIM2-217ENST00000491330 TMEM107Q6UX40 140 aa15.09■□□□□ 0.01
PDLIM2-217ENST00000491330 SZRD1Q7Z422 152 aa15.09■□□□□ 0.01
PDLIM2-217ENST00000491330 P4HA3Q7Z4N8 544 aa15.09■□□□□ 0.01
PDLIM2-217ENST00000491330 TRIM42Q8IWZ5 723 aa15.09■□□□□ 0.01
PDLIM2-217ENST00000491330 NATD1Q8N6N6 113 aa15.09■□□□□ 0.01
PDLIM2-217ENST00000491330 OR7G2Q8NG99 324 aa15.09■□□□□ 0.01
PDLIM2-217ENST00000491330 RNASE6Q93091 150 aaKnown RBP15.09■□□□□ 0.01
PDLIM2-217ENST00000491330 MTERF3Q96E29 417 aa15.09■□□□□ 0.01
PDLIM2-217ENST00000491330 ELP4Q96EB1 424 aa15.09■□□□□ 0.01
PDLIM2-217ENST00000491330 WDYHV1Q96HA8 205 aa15.09■□□□□ 0.01
PDLIM2-217ENST00000491330 PPP3R2Q96LZ3 170 aa15.09■□□□□ 0.01
PDLIM2-217ENST00000491330 AMDHD1Q96NU7 426 aa15.09■□□□□ 0.01
PDLIM2-217ENST00000491330 ZIM3Q96PE6 472 aa15.09■□□□□ 0.01
PDLIM2-217ENST00000491330 TBL1XR1Q9BZK7 514 aa15.09■□□□□ 0.01
PDLIM2-217ENST00000491330 OR2B2Q9GZK3 357 aa15.09■□□□□ 0.01
PDLIM2-217ENST00000491330 NPDC1Q9NQX5 325 aaPredicted RBP15.09■□□□□ 0.01
PDLIM2-217ENST00000491330 TEX15Q9BXT5 2789 aa15.09■□□□□ 0.01
PDLIM2-217ENST00000491330 MYO9AB2RTY4 2548 aa15.09■□□□□ 0.01
PDLIM2-217ENST00000491330 CENPEQ02224 2701 aa15.08■□□□□ 0.01
PDLIM2-217ENST00000491330 UQCRHLA0A096LP55 91 aa15.08■□□□□ 0
PDLIM2-217ENST00000491330 BIRC5O15392 142 aa15.08■□□□□ 0
PDLIM2-217ENST00000491330 TSPAN2O60636 221 aa15.08■□□□□ 0
PDLIM2-217ENST00000491330 SOX30O94993 753 aa15.08■□□□□ 0
PDLIM2-217ENST00000491330 IL18BPO95998 194 aa15.08■□□□□ 0
PDLIM2-217ENST00000491330 PEPDP12955 493 aa15.08■□□□□ 0
PDLIM2-217ENST00000491330 GRK2P25098 689 aa15.08■□□□□ 0
PDLIM2-217ENST00000491330 ALDH3A1P30838 453 aa15.08■□□□□ 0
PDLIM2-217ENST00000491330 CEACAM8P31997 349 aaPredicted RBP15.08■□□□□ 0
PDLIM2-217ENST00000491330 HPCAL1P37235 193 aa15.08■□□□□ 0
PDLIM2-217ENST00000491330 RFX3P48380 749 aa15.08■□□□□ 0
PDLIM2-217ENST00000491330 PRR5P85299 388 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms