RNA–Protein interactions for RNA: ENST00000490163.5

UBXN4-208, Transcript of UBX domain protein 4, humanhuman

TSL 2

Gene UBXN4, Length 3,394 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-208ENST00000490163 CYR61O00622 381 aa2.61□□□□□ -1.99
UBXN4-208ENST00000490163 POLR1CO15160 346 aaPredicted RBP2.61□□□□□ -1.99
UBXN4-208ENST00000490163 MED7O43513 233 aa2.61□□□□□ -1.99
UBXN4-208ENST00000490163 TRAPPC3O43617 180 aa2.61□□□□□ -1.99
UBXN4-208ENST00000490163 KDELR3O43731 214 aa2.61□□□□□ -1.99
UBXN4-208ENST00000490163 BRI3O95415 125 aa2.61□□□□□ -1.99
UBXN4-208ENST00000490163 TGM6O95932 706 aa2.61□□□□□ -1.99
UBXN4-208ENST00000490163 EGFP01133 1207 aa2.61□□□□□ -1.99
UBXN4-208ENST00000490163 APOEP02649 317 aa2.61□□□□□ -1.99
UBXN4-208ENST00000490163 PLEKP08567 350 aaPredicted RBP2.61□□□□□ -1.99
UBXN4-208ENST00000490163 CT62P0C5K7 136 aa2.61□□□□□ -1.99
UBXN4-208ENST00000490163 GSTT2P0CG29 244 aa2.61□□□□□ -1.99
UBXN4-208ENST00000490163 GSTT2BP0CG30 244 aa2.61□□□□□ -1.99
UBXN4-208ENST00000490163 HLA-DOBP13765 273 aa2.61□□□□□ -1.99
UBXN4-208ENST00000490163 MYL6BP14649 208 aa2.61□□□□□ -1.99
UBXN4-208ENST00000490163 IL32P24001 234 aa2.61□□□□□ -1.99
UBXN4-208ENST00000490163 ALDH4A1P30038 563 aa2.61□□□□□ -1.99
UBXN4-208ENST00000490163 BMI1P35226 326 aa2.61□□□□□ -1.99
UBXN4-208ENST00000490163 PMPCAQ10713 525 aa2.61□□□□□ -1.99
UBXN4-208ENST00000490163 TAF10Q12962 218 aa2.61□□□□□ -1.99
UBXN4-208ENST00000490163 ITIH4Q14624 930 aa2.61□□□□□ -1.99
UBXN4-208ENST00000490163 SMTNL2Q2TAL5 461 aa2.61□□□□□ -1.99
UBXN4-208ENST00000490163 CNPY1Q3B7I2 92 aa2.61□□□□□ -1.99
UBXN4-208ENST00000490163 ITPRIPL2Q3MIP1 535 aa2.61□□□□□ -1.99
UBXN4-208ENST00000490163 XKR4Q5GH76 650 aa2.61□□□□□ -1.99
UBXN4-208ENST00000490163 ARL13AQ5H913 290 aaPredicted RBP2.61□□□□□ -1.99
UBXN4-208ENST00000490163 PIP5KL1Q5T9C9 394 aa2.61□□□□□ -1.99
UBXN4-208ENST00000490163 LIPNQ5VXI9 398 aa2.61□□□□□ -1.99
UBXN4-208ENST00000490163 C8orf74Q6P047 294 aa2.61□□□□□ -1.99
UBXN4-208ENST00000490163 HDDC2Q7Z4H3 204 aa2.61□□□□□ -1.99
UBXN4-208ENST00000490163 COMMD2Q86X83 199 aa2.61□□□□□ -1.99
UBXN4-208ENST00000490163 TMEM139Q8IV31 216 aa2.61□□□□□ -1.99
UBXN4-208ENST00000490163 ACVR1CQ8NER5 493 aa2.61□□□□□ -1.99
UBXN4-208ENST00000490163 FEZF2Q8TBJ5 459 aa2.61□□□□□ -1.99
UBXN4-208ENST00000490163 SLC26A7Q8TE54 656 aa2.61□□□□□ -1.99
UBXN4-208ENST00000490163 CCDC107Q8WV48 283 aa2.61□□□□□ -1.99
UBXN4-208ENST00000490163 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP2.61□□□□□ -1.99
UBXN4-208ENST00000490163 CITED1Q99966 193 aa2.61□□□□□ -1.99
UBXN4-208ENST00000490163 CHRDL1Q9BU40 450 aa2.61□□□□□ -1.99
UBXN4-208ENST00000490163 KRTAP4-11Q9BYQ6 195 aa2.61□□□□□ -1.99
UBXN4-208ENST00000490163 ILKAPQ9H0C8 392 aaPredicted RBP2.61□□□□□ -1.99
UBXN4-208ENST00000490163 NARFLQ9H6Q4 476 aa2.61□□□□□ -1.99
UBXN4-208ENST00000490163 GPN2Q9H9Y4 310 aaPredicted RBP2.61□□□□□ -1.99
UBXN4-208ENST00000490163 PLAC1Q9HBJ0 212 aa2.61□□□□□ -1.99
UBXN4-208ENST00000490163 LNPEPQ9UIQ6 1025 aa2.61□□□□□ -1.99
UBXN4-208ENST00000490163 LRRC42Q9Y546 428 aa2.61□□□□□ -1.99
UBXN4-208ENST00000490163 ABCC4O15439 1325 aa2.61□□□□□ -1.99
UBXN4-208ENST00000490163 MED19A0JLT2 244 aaPredicted RBP2.61□□□□□ -1.99
UBXN4-208ENST00000490163 TYW5A2RUC4 315 aaKnown RBP2.61□□□□□ -1.99
UBXN4-208ENST00000490163 CCDC160A6NGH7 325 aa2.61□□□□□ -1.99
UBXN4-208ENST00000490163 GOLGA8TH3BQL2 631 aa2.61□□□□□ -1.99
UBXN4-208ENST00000490163 GMFGO60234 142 aa2.61□□□□□ -1.99
UBXN4-208ENST00000490163 ZNF254O75437 659 aa2.61□□□□□ -1.99
UBXN4-208ENST00000490163 TM7SF2O76062 418 aa2.61□□□□□ -1.99
UBXN4-208ENST00000490163 SYNGR4O95473 234 aa2.61□□□□□ -1.99
UBXN4-208ENST00000490163 ACSL3O95573 720 aa2.61□□□□□ -1.99
UBXN4-208ENST00000490163 GOLGA8HP0CJ92 632 aa2.61□□□□□ -1.99
UBXN4-208ENST00000490163 PRKACAP17612 351 aa2.61□□□□□ -1.99
UBXN4-208ENST00000490163 POLR2EP19388 210 aaKnown RBP2.61□□□□□ -1.99
UBXN4-208ENST00000490163 CASP14P31944 242 aa2.61□□□□□ -1.99
UBXN4-208ENST00000490163 PHBP35232 272 aa2.61□□□□□ -1.99
UBXN4-208ENST00000490163 DCTP40126 519 aa2.61□□□□□ -1.99
UBXN4-208ENST00000490163 RFX5P48382 616 aaPredicted RBP2.61□□□□□ -1.99
UBXN4-208ENST00000490163 PCYT1AP49585 367 aa2.61□□□□□ -1.99
UBXN4-208ENST00000490163 CDH12P55289 794 aa2.61□□□□□ -1.99
UBXN4-208ENST00000490163 KCNJ2P63252 427 aa2.61□□□□□ -1.99
UBXN4-208ENST00000490163 PLOD1Q02809 727 aaPredicted RBP2.61□□□□□ -1.99
UBXN4-208ENST00000490163 PPIDQ08752 370 aaKnown RBP2.61□□□□□ -1.99
UBXN4-208ENST00000490163 ZP4Q12836 540 aa2.61□□□□□ -1.99
UBXN4-208ENST00000490163 KLRB1Q12918 225 aa2.61□□□□□ -1.99
UBXN4-208ENST00000490163 DOC2AQ14183 400 aa2.61□□□□□ -1.99
UBXN4-208ENST00000490163 MTF1Q14872 753 aa2.61□□□□□ -1.99
UBXN4-208ENST00000490163 EXOSC7Q15024 291 aaKnown RBP2.61□□□□□ -1.99
UBXN4-208ENST00000490163 EFTUD2Q15029 972 aaKnown RBP eCLIP2.61□□□□□ -1.99
UBXN4-208ENST00000490163 FAM46CQ5VWP2 391 aa2.61□□□□□ -1.99
UBXN4-208ENST00000490163 PAQR6Q6TCH4 344 aa2.61□□□□□ -1.99
UBXN4-208ENST00000490163 ZNF562Q6V9R5 426 aa2.61□□□□□ -1.99
UBXN4-208ENST00000490163 MACC1Q6ZN28 852 aa2.61□□□□□ -1.99
UBXN4-208ENST00000490163 CNGA4Q8IV77 575 aa2.61□□□□□ -1.99
UBXN4-208ENST00000490163 POC1AQ8NBT0 407 aa2.61□□□□□ -1.99
UBXN4-208ENST00000490163 MITD1Q8WV92 249 aa2.61□□□□□ -1.99
UBXN4-208ENST00000490163 SLC47A1Q96FL8 570 aa2.61□□□□□ -1.99
UBXN4-208ENST00000490163 CHMP6Q96FZ7 201 aa2.61□□□□□ -1.99
UBXN4-208ENST00000490163 CGREF1Q99674 301 aa2.61□□□□□ -1.99
UBXN4-208ENST00000490163 MLST8Q9BVC4 326 aa2.61□□□□□ -1.99
UBXN4-208ENST00000490163 IDI2Q9BXS1 227 aa2.61□□□□□ -1.99
UBXN4-208ENST00000490163 GLT8D2Q9H1C3 349 aa2.61□□□□□ -1.99
UBXN4-208ENST00000490163 MARCH7Q9H992 704 aa2.61□□□□□ -1.99
UBXN4-208ENST00000490163 NTN4Q9HB63 628 aa2.61□□□□□ -1.99
UBXN4-208ENST00000490163 OR6C2Q9NZP2 312 aa2.61□□□□□ -1.99
UBXN4-208ENST00000490163 ADAM22Q9P0K1 906 aa2.61□□□□□ -1.99
UBXN4-208ENST00000490163 TXNDC16Q9P2K2 825 aa2.61□□□□□ -1.99
UBXN4-208ENST00000490163 DBF4Q9UBU7 674 aaPredicted RBP2.61□□□□□ -1.99
UBXN4-208ENST00000490163 FZD10Q9ULW2 581 aa2.61□□□□□ -1.99
UBXN4-208ENST00000490163 GUCA1BQ9UMX6 200 aa2.61□□□□□ -1.99
UBXN4-208ENST00000490163 GAB2Q9UQC2 676 aa2.61□□□□□ -1.99
UBXN4-208ENST00000490163 LINC01548A6NM66 108 aa2.6□□□□□ -1.99
UBXN4-208ENST00000490163 GNA14O95837 355 aa2.6□□□□□ -1.99
UBXN4-208ENST00000490163 PROS1P07225 676 aa2.6□□□□□ -1.99
UBXN4-208ENST00000490163 NUDT17P0C025 328 aa2.6□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms