RNA–Protein interactions for RNA: ENST00000489656.5

VPS26A-205, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-205ENST00000489656 DCAF7P61962 342 aa13.14□□□□□ -0.31
VPS26A-205ENST00000489656 POU6F2P78424 691 aaPredicted RBP13.14□□□□□ -0.31
VPS26A-205ENST00000489656 HPCAP84074 193 aa13.14□□□□□ -0.31
VPS26A-205ENST00000489656 GPAT3Q53EU6 434 aa13.14□□□□□ -0.31
VPS26A-205ENST00000489656 RPS26P11Q5JNZ5 115 aaPredicted RBP13.14□□□□□ -0.31
VPS26A-205ENST00000489656 DCST2Q5T1A1 773 aa13.14□□□□□ -0.31
VPS26A-205ENST00000489656 FRRS1Q6ZNA5 592 aa13.14□□□□□ -0.31
VPS26A-205ENST00000489656 TMPRSS7Q7RTY8 843 aa13.14□□□□□ -0.31
VPS26A-205ENST00000489656 ERMP1Q7Z2K6 904 aa13.14□□□□□ -0.31
VPS26A-205ENST00000489656 CPEB2Q7Z5Q1 589 aaKnown RBP13.14□□□□□ -0.31
VPS26A-205ENST00000489656 ARMC8Q8IUR7 673 aa13.14□□□□□ -0.31
VPS26A-205ENST00000489656 SLC44A2Q8IWA5 706 aaPredicted RBP13.14□□□□□ -0.31
VPS26A-205ENST00000489656 LILRA2Q8N149 483 aa13.14□□□□□ -0.31
VPS26A-205ENST00000489656 GPR151Q8TDV0 419 aa13.14□□□□□ -0.31
VPS26A-205ENST00000489656 HSH2DQ96JZ2 352 aa13.14□□□□□ -0.31
VPS26A-205ENST00000489656 SDF2Q99470 211 aa13.14□□□□□ -0.31
VPS26A-205ENST00000489656 SEPHS2Q99611 448 aa13.14□□□□□ -0.31
VPS26A-205ENST00000489656 NUDT9Q9BW91 350 aa13.14□□□□□ -0.31
VPS26A-205ENST00000489656 OR8D2Q9GZM6 311 aa13.14□□□□□ -0.31
VPS26A-205ENST00000489656 ZNF350Q9GZX5 532 aa13.14□□□□□ -0.31
VPS26A-205ENST00000489656 POLR1BQ9H9Y6 1135 aa13.14□□□□□ -0.31
VPS26A-205ENST00000489656 COPS7AQ9UBW8 275 aa13.14□□□□□ -0.31
VPS26A-205ENST00000489656 DTX4Q9Y2E6 619 aa13.14□□□□□ -0.31
VPS26A-205ENST00000489656 GPR55Q9Y2T6 319 aaPredicted RBP13.14□□□□□ -0.31
VPS26A-205ENST00000489656 PTRH2Q9Y3E5 179 aaKnown RBP13.14□□□□□ -0.31
VPS26A-205ENST00000489656 AHCTF1Q8WYP5 2266 aa13.14□□□□□ -0.31
VPS26A-205ENST00000489656 WDFY3Q8IZQ1 3526 aa13.13□□□□□ -0.31
VPS26A-205ENST00000489656 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.13□□□□□ -0.31
VPS26A-205ENST00000489656 GFRA3O60609 400 aa13.13□□□□□ -0.31
VPS26A-205ENST00000489656 ZIC2O95409 532 aaPredicted RBP13.13□□□□□ -0.31
VPS26A-205ENST00000489656 BAG2O95816 211 aa13.13□□□□□ -0.31
VPS26A-205ENST00000489656 CAPNS1P04632 268 aa13.13□□□□□ -0.31
VPS26A-205ENST00000489656 UMODP07911 640 aa13.13□□□□□ -0.31
VPS26A-205ENST00000489656 CT45A8P0DMV1 189 aa13.13□□□□□ -0.31
VPS26A-205ENST00000489656 CT45A9P0DMV2 189 aa13.13□□□□□ -0.31
VPS26A-205ENST00000489656 CD247P20963 164 aa13.13□□□□□ -0.31
VPS26A-205ENST00000489656 FASP25445 335 aa13.13□□□□□ -0.31
VPS26A-205ENST00000489656 GABRA3P34903 492 aa13.13□□□□□ -0.31
VPS26A-205ENST00000489656 PPICP45877 212 aa13.13□□□□□ -0.31
VPS26A-205ENST00000489656 FOXL2P58012 376 aa13.13□□□□□ -0.31
VPS26A-205ENST00000489656 PSPHP78330 225 aa13.13□□□□□ -0.31
VPS26A-205ENST00000489656 CT45A2Q5DJT8 189 aa13.13□□□□□ -0.31
VPS26A-205ENST00000489656 FAAH2Q6GMR7 532 aa13.13□□□□□ -0.31
VPS26A-205ENST00000489656 TYW3Q6IPR3 259 aaKnown RBP13.13□□□□□ -0.31
VPS26A-205ENST00000489656 PAPD4Q6PIY7 484 aaKnown RBP13.13□□□□□ -0.31
VPS26A-205ENST00000489656 NPSR1Q6W5P4 371 aa13.13□□□□□ -0.31
VPS26A-205ENST00000489656 FKBP9P1Q75LS8 142 aa13.13□□□□□ -0.31
VPS26A-205ENST00000489656 PIWIL3Q7Z3Z3 882 aaKnown RBP13.13□□□□□ -0.31
VPS26A-205ENST00000489656 ZNF321PQ8N8H1 164 aa13.13□□□□□ -0.31
VPS26A-205ENST00000489656 TMEM102Q8N9M5 508 aaPredicted RBP13.13□□□□□ -0.31
VPS26A-205ENST00000489656 ZSCAN1Q8NBB4 408 aa13.13□□□□□ -0.31
VPS26A-205ENST00000489656 C17orf47Q8NEP4 570 aa13.13□□□□□ -0.31
VPS26A-205ENST00000489656 B3GNT7Q8NFL0 401 aa13.13□□□□□ -0.31
VPS26A-205ENST00000489656 FAM110BQ8TC76 370 aa13.13□□□□□ -0.31
VPS26A-205ENST00000489656 CT55Q8WUE5 264 aa13.13□□□□□ -0.31
VPS26A-205ENST00000489656 LPAR4Q99677 370 aa13.13□□□□□ -0.31
VPS26A-205ENST00000489656 PKP2Q99959 881 aa13.13□□□□□ -0.31
VPS26A-205ENST00000489656 CHID1Q9BWS9 393 aa13.13□□□□□ -0.31
VPS26A-205ENST00000489656 ITPAQ9BY32 194 aa13.13□□□□□ -0.31
VPS26A-205ENST00000489656 MTHFD2LQ9H903 347 aaPredicted RBP13.13□□□□□ -0.31
VPS26A-205ENST00000489656 Q9N2J8 555 aa13.13□□□□□ -0.31
VPS26A-205ENST00000489656 IL1RAPQ9NPH3 570 aa13.13□□□□□ -0.31
VPS26A-205ENST00000489656 AGPAT4Q9NRZ5 378 aa13.13□□□□□ -0.31
VPS26A-205ENST00000489656 BAG5Q9UL15 447 aa13.13□□□□□ -0.31
VPS26A-205ENST00000489656 V9GYQ6 96 aa13.13□□□□□ -0.31
VPS26A-205ENST00000489656 PTPRZ1P23471 2315 aaPredicted RBP13.13□□□□□ -0.31
VPS26A-205ENST00000489656 DOCK10Q96BY6 2186 aa13.13□□□□□ -0.31
VPS26A-205ENST00000489656 GXYLT2A0PJZ3 443 aa13.12□□□□□ -0.31
VPS26A-205ENST00000489656 FRG2CA6NGY1 282 aa13.12□□□□□ -0.31
VPS26A-205ENST00000489656 CDRT15L2A8MXV6 281 aa13.12□□□□□ -0.31
VPS26A-205ENST00000489656 C21orf140B9A014 251 aa13.12□□□□□ -0.31
VPS26A-205ENST00000489656 TERTO14746 1132 aaKnown RBP13.12□□□□□ -0.31
VPS26A-205ENST00000489656 KIAA0513O60268 411 aa13.12□□□□□ -0.31
VPS26A-205ENST00000489656 STX11O75558 287 aa13.12□□□□□ -0.31
VPS26A-205ENST00000489656 TIPRLO75663 272 aa13.12□□□□□ -0.31
VPS26A-205ENST00000489656 KCNK2O95069 426 aa13.12□□□□□ -0.31
VPS26A-205ENST00000489656 OPN1SWP03999 348 aa13.12□□□□□ -0.31
VPS26A-205ENST00000489656 DRD5P21918 477 aa13.12□□□□□ -0.31
VPS26A-205ENST00000489656 RPS4Y1P22090 263 aaKnown RBP13.12□□□□□ -0.31
VPS26A-205ENST00000489656 FOLR3P41439 243 aa13.12□□□□□ -0.31
VPS26A-205ENST00000489656 KCNJ5P48544 419 aa13.12□□□□□ -0.31
VPS26A-205ENST00000489656 GABREP78334 506 aa13.12□□□□□ -0.31
VPS26A-205ENST00000489656 KCNJ10P78508 379 aa13.12□□□□□ -0.31
VPS26A-205ENST00000489656 CHRNEQ04844 493 aa13.12□□□□□ -0.31
VPS26A-205ENST00000489656 EBPQ15125 230 aaKnown RBP13.12□□□□□ -0.31
VPS26A-205ENST00000489656 ATP6AP1Q15904 470 aa13.12□□□□□ -0.31
VPS26A-205ENST00000489656 CYP27C1Q4G0S4 372 aa13.12□□□□□ -0.31
VPS26A-205ENST00000489656 IFI44LQ53G44 452 aa13.12□□□□□ -0.31
VPS26A-205ENST00000489656 SLC29A4Q7RTT9 530 aa13.12□□□□□ -0.31
VPS26A-205ENST00000489656 VTCN1Q7Z7D3 282 aa13.12□□□□□ -0.31
VPS26A-205ENST00000489656 C9orf40Q8IXQ3 194 aa13.12□□□□□ -0.31
VPS26A-205ENST00000489656 NLGN4XQ8N0W4 816 aa13.12□□□□□ -0.31
VPS26A-205ENST00000489656 ZNF619Q8N2I2 560 aa13.12□□□□□ -0.31
VPS26A-205ENST00000489656 ZNF441Q8N8Z8 693 aa13.12□□□□□ -0.31
VPS26A-205ENST00000489656 NLGN4YQ8NFZ3 816 aaPredicted RBP13.12□□□□□ -0.31
VPS26A-205ENST00000489656 OR8K3Q8NH51 312 aa13.12□□□□□ -0.31
VPS26A-205ENST00000489656 APOBEC4Q8WW27 367 aaKnown RBP13.12□□□□□ -0.31
VPS26A-205ENST00000489656 OIT3Q8WWZ8 545 aa13.12□□□□□ -0.31
VPS26A-205ENST00000489656 GEMIN6Q8WXD5 167 aaKnown RBP13.12□□□□□ -0.31
VPS26A-205ENST00000489656 LRTOMTQ8WZ04 291 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms