RNA–Protein interactions for RNA: ENST00000489142.5

VTI1A-206, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-206ENST00000489142 TMCO6Q96DC7 493 aa12.77□□□□□ -0.37
VTI1A-206ENST00000489142 SLC35A4Q96G79 324 aa12.77□□□□□ -0.37
VTI1A-206ENST00000489142 EQTNQ9NQ60 294 aa12.77□□□□□ -0.37
VTI1A-206ENST00000489142 DDX18Q9NVP1 670 aaKnown RBP12.77□□□□□ -0.37
VTI1A-206ENST00000489142 WIF1Q9Y5W5 379 aa12.77□□□□□ -0.37
VTI1A-206ENST00000489142 PCNX3Q9H6A9 2034 aa12.77□□□□□ -0.37
VTI1A-206ENST00000489142 DOCK7Q96N67 2140 aa12.77□□□□□ -0.37
VTI1A-206ENST00000489142 POLQO75417 2590 aa12.76□□□□□ -0.37
VTI1A-206ENST00000489142 LSM1O15116 133 aaKnown RBP12.76□□□□□ -0.37
VTI1A-206ENST00000489142 PDPK1O15530 556 aa12.76□□□□□ -0.37
VTI1A-206ENST00000489142 NPHS1O60500 1241 aa12.76□□□□□ -0.37
VTI1A-206ENST00000489142 COQ9O75208 318 aa12.76□□□□□ -0.37
VTI1A-206ENST00000489142 CHEK2O96017 543 aa12.76□□□□□ -0.37
VTI1A-206ENST00000489142 CYP4B1P13584 511 aa12.76□□□□□ -0.37
VTI1A-206ENST00000489142 IGFBP2P18065 325 aa12.76□□□□□ -0.37
VTI1A-206ENST00000489142 TLE4Q04727 773 aa12.76□□□□□ -0.37
VTI1A-206ENST00000489142 SRYQ05066 204 aa12.76□□□□□ -0.37
VTI1A-206ENST00000489142 STX5Q13190 355 aa12.76□□□□□ -0.37
VTI1A-206ENST00000489142 SNTA1Q13424 505 aa12.76□□□□□ -0.37
VTI1A-206ENST00000489142 UGT3A2Q3SY77 523 aa12.76□□□□□ -0.37
VTI1A-206ENST00000489142 WDR93Q6P2C0 686 aa12.76□□□□□ -0.37
VTI1A-206ENST00000489142 EMBQ6PCB8 327 aa12.76□□□□□ -0.37
VTI1A-206ENST00000489142 GALNT10Q86SR1 603 aa12.76□□□□□ -0.37
VTI1A-206ENST00000489142 OR2L13Q8N349 312 aa12.76□□□□□ -0.37
VTI1A-206ENST00000489142 FBXO30Q8TB52 745 aa12.76□□□□□ -0.37
VTI1A-206ENST00000489142 ABTB1Q969K4 478 aaPredicted RBP12.76□□□□□ -0.37
VTI1A-206ENST00000489142 ELP4Q96EB1 424 aa12.76□□□□□ -0.37
VTI1A-206ENST00000489142 WDYHV1Q96HA8 205 aa12.76□□□□□ -0.37
VTI1A-206ENST00000489142 PKNOX2Q96KN3 472 aa12.76□□□□□ -0.37
VTI1A-206ENST00000489142 FCRL1Q96LA6 429 aa12.76□□□□□ -0.37
VTI1A-206ENST00000489142 TRIB1Q96RU8 372 aa12.76□□□□□ -0.37
VTI1A-206ENST00000489142 TRMOQ9BU70 441 aa12.76□□□□□ -0.37
VTI1A-206ENST00000489142 TAS2R7Q9NYW3 318 aa12.76□□□□□ -0.37
VTI1A-206ENST00000489142 C19orf53Q9UNZ5 99 aaPredicted RBP12.76□□□□□ -0.37
VTI1A-206ENST00000489142 TRAF6Q9Y4K3 522 aa12.76□□□□□ -0.37
VTI1A-206ENST00000489142 A0A087WV62 115 aa12.75□□□□□ -0.37
VTI1A-206ENST00000489142 GXYLT2A0PJZ3 443 aa12.75□□□□□ -0.37
VTI1A-206ENST00000489142 SKAP2O75563 359 aaPredicted RBP12.75□□□□□ -0.37
VTI1A-206ENST00000489142 PSMG1O95456 288 aa12.75□□□□□ -0.37
VTI1A-206ENST00000489142 NEFHP12036 1026 aa12.75□□□□□ -0.37
VTI1A-206ENST00000489142 BMP5P22003 454 aa12.75□□□□□ -0.37
VTI1A-206ENST00000489142 GRK2P25098 689 aa12.75□□□□□ -0.37
VTI1A-206ENST00000489142 SSTR2P30874 369 aa12.75□□□□□ -0.37
VTI1A-206ENST00000489142 EVI2BP34910 448 aa12.75□□□□□ -0.37
VTI1A-206ENST00000489142 GPC1P35052 558 aa12.75□□□□□ -0.37
VTI1A-206ENST00000489142 AGFG1P52594 562 aaKnown RBP12.75□□□□□ -0.37
VTI1A-206ENST00000489142 GAS1P54826 345 aa12.75□□□□□ -0.37
VTI1A-206ENST00000489142 DLX5P56178 289 aa12.75□□□□□ -0.37
VTI1A-206ENST00000489142 GAB1Q13480 694 aa12.75□□□□□ -0.37
VTI1A-206ENST00000489142 EFR3AQ14156 821 aa12.75□□□□□ -0.37
VTI1A-206ENST00000489142 RIPPLY2Q5TAB7 128 aa12.75□□□□□ -0.37
VTI1A-206ENST00000489142 CES4AQ5XG92 561 aa12.75□□□□□ -0.37
VTI1A-206ENST00000489142 SZRD1Q7Z422 152 aa12.75□□□□□ -0.37
VTI1A-206ENST00000489142 PLCZ1Q86YW0 608 aa12.75□□□□□ -0.37
VTI1A-206ENST00000489142 DMRTC2Q8IXT2 367 aaPredicted RBP12.75□□□□□ -0.37
VTI1A-206ENST00000489142 RELL2Q8NC24 303 aaPredicted RBP12.75□□□□□ -0.37
VTI1A-206ENST00000489142 NUDT8Q8WV74 236 aa12.75□□□□□ -0.37
VTI1A-206ENST00000489142 PPCDCQ96CD2 204 aa12.75□□□□□ -0.37
VTI1A-206ENST00000489142 OTUB1Q96FW1 271 aaPredicted RBP12.75□□□□□ -0.37
VTI1A-206ENST00000489142 C3orf30Q96M34 536 aa12.75□□□□□ -0.37
VTI1A-206ENST00000489142 CCT7Q99832 543 aa12.75□□□□□ -0.37
VTI1A-206ENST00000489142 TREX2Q9BQ50 279 aaPredicted RBP12.75□□□□□ -0.37
VTI1A-206ENST00000489142 C1orf50Q9BV19 199 aa12.75□□□□□ -0.37
VTI1A-206ENST00000489142 PARD6BQ9BYG5 372 aa12.75□□□□□ -0.37
VTI1A-206ENST00000489142 RTN4RQ9BZR6 473 aa12.75□□□□□ -0.37
VTI1A-206ENST00000489142 ROPN1BQ9BZX4 212 aaPredicted RBP12.75□□□□□ -0.37
VTI1A-206ENST00000489142 PRDM14Q9GZV8 571 aa12.75□□□□□ -0.37
VTI1A-206ENST00000489142 STMN4Q9H169 189 aaPredicted RBP12.75□□□□□ -0.37
VTI1A-206ENST00000489142 REEP4Q9H6H4 257 aa12.75□□□□□ -0.37
VTI1A-206ENST00000489142 ROPN1Q9HAT0 212 aaPredicted RBP12.75□□□□□ -0.37
VTI1A-206ENST00000489142 TAS2R10Q9NYW0 307 aa12.75□□□□□ -0.37
VTI1A-206ENST00000489142 SH3BP4Q9P0V3 963 aa12.75□□□□□ -0.37
VTI1A-206ENST00000489142 CBLCQ9ULV8 474 aa12.75□□□□□ -0.37
VTI1A-206ENST00000489142 RPH3AQ9Y2J0 694 aaPredicted RBP12.75□□□□□ -0.37
VTI1A-206ENST00000489142 OTOGQ6ZRI0 2925 aa12.74□□□□□ -0.37
VTI1A-206ENST00000489142 WDR91A4D1P6 747 aa12.74□□□□□ -0.37
VTI1A-206ENST00000489142 ENO4A6NNW6 628 aa12.74□□□□□ -0.37
VTI1A-206ENST00000489142 AHRRA9YTQ3 701 aa12.74□□□□□ -0.37
VTI1A-206ENST00000489142 NPIPB8E9PQR5 432 aa12.74□□□□□ -0.37
VTI1A-206ENST00000489142 PLOD2O00469 737 aa12.74□□□□□ -0.37
VTI1A-206ENST00000489142 GMFGO60234 142 aa12.74□□□□□ -0.37
VTI1A-206ENST00000489142 ABCB7O75027 752 aa12.74□□□□□ -0.37
VTI1A-206ENST00000489142 PEX11AO75192 247 aa12.74□□□□□ -0.37
VTI1A-206ENST00000489142 LYPLA1O75608 230 aaPredicted RBP12.74□□□□□ -0.37
VTI1A-206ENST00000489142 CBR3O75828 277 aa12.74□□□□□ -0.37
VTI1A-206ENST00000489142 EPPINO95925 133 aa12.74□□□□□ -0.37
VTI1A-206ENST00000489142 HOXD4P09016 255 aaPredicted RBP12.74□□□□□ -0.37
VTI1A-206ENST00000489142 BCKDHAP12694 445 aa12.74□□□□□ -0.37
VTI1A-206ENST00000489142 GABRA3P34903 492 aa12.74□□□□□ -0.37
VTI1A-206ENST00000489142 STARP49675 285 aa12.74□□□□□ -0.37
VTI1A-206ENST00000489142 PNLIPRP2P54317 469 aa12.74□□□□□ -0.37
VTI1A-206ENST00000489142 PRKAG1P54619 331 aa12.74□□□□□ -0.37
VTI1A-206ENST00000489142 ZNF844Q08AG5 666 aa12.74□□□□□ -0.37
VTI1A-206ENST00000489142 KRT71Q3SY84 523 aa12.74□□□□□ -0.37
VTI1A-206ENST00000489142 NHSL2Q5HYW2 709 aa12.74□□□□□ -0.37
VTI1A-206ENST00000489142 EXOC3L1Q86VI1 746 aa12.74□□□□□ -0.37
VTI1A-206ENST00000489142 IFNEQ86WN2 208 aa12.74□□□□□ -0.37
VTI1A-206ENST00000489142 PM20D2Q8IYS1 436 aa12.74□□□□□ -0.37
VTI1A-206ENST00000489142 CLYBLQ8N0X4 340 aa12.74□□□□□ -0.37
VTI1A-206ENST00000489142 PIK3R3Q92569 461 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms