RNA–Protein interactions for RNA: ENST00000489111.1

USP11-211, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 516 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-211ENST00000489111 CHRNEQ04844 493 aa9.3□□□□□ -0.92
USP11-211ENST00000489111 LARS2Q15031 903 aaKnown RBP9.3□□□□□ -0.92
USP11-211ENST00000489111 NNATQ16517 81 aa9.3□□□□□ -0.92
USP11-211ENST00000489111 EIPR1Q53HC9 387 aa9.3□□□□□ -0.92
USP11-211ENST00000489111 ZNF311Q5JNZ3 666 aa9.3□□□□□ -0.92
USP11-211ENST00000489111 CCNJQ5T5M9 372 aa9.3□□□□□ -0.92
USP11-211ENST00000489111 HMBOX1Q6NT76 420 aa9.3□□□□□ -0.92
USP11-211ENST00000489111 FIGNL1Q6PIW4 674 aa9.3□□□□□ -0.92
USP11-211ENST00000489111 PAPD4Q6PIY7 484 aaKnown RBP9.3□□□□□ -0.92
USP11-211ENST00000489111 IZUMO2Q6UXV1 221 aa9.3□□□□□ -0.92
USP11-211ENST00000489111 NPSR1Q6W5P4 371 aa9.3□□□□□ -0.92
USP11-211ENST00000489111 FRRS1Q6ZNA5 592 aa9.3□□□□□ -0.92
USP11-211ENST00000489111 OLIG3Q7RTU3 272 aa9.3□□□□□ -0.92
USP11-211ENST00000489111 CPEB2Q7Z5Q1 589 aaKnown RBP9.3□□□□□ -0.92
USP11-211ENST00000489111 CYP4Z1Q86W10 505 aa9.3□□□□□ -0.92
USP11-211ENST00000489111 ZNF619Q8N2I2 560 aa9.3□□□□□ -0.92
USP11-211ENST00000489111 ESX1Q8N693 406 aa9.3□□□□□ -0.92
USP11-211ENST00000489111 OR52P1PQ8NH57 321 aa9.3□□□□□ -0.92
USP11-211ENST00000489111 HOXB13Q92826 284 aaPredicted RBP9.3□□□□□ -0.92
USP11-211ENST00000489111 PMM1Q92871 262 aa9.3□□□□□ -0.92
USP11-211ENST00000489111 BTBD9Q96Q07 612 aa9.3□□□□□ -0.92
USP11-211ENST00000489111 ZNF347Q96SE7 839 aa9.3□□□□□ -0.92
USP11-211ENST00000489111 SDF2Q99470 211 aa9.3□□□□□ -0.92
USP11-211ENST00000489111 LPAR4Q99677 370 aa9.3□□□□□ -0.92
USP11-211ENST00000489111 CIB1Q99828 191 aa9.3□□□□□ -0.92
USP11-211ENST00000489111 G6PC3Q9BUM1 346 aa9.3□□□□□ -0.92
USP11-211ENST00000489111 C9orf16Q9BUW7 83 aa9.3□□□□□ -0.92
USP11-211ENST00000489111 PINK1Q9BXM7 581 aa9.3□□□□□ -0.92
USP11-211ENST00000489111 MTHFD2LQ9H903 347 aaPredicted RBP9.3□□□□□ -0.92
USP11-211ENST00000489111 KLHL28Q9NXS3 571 aa9.3□□□□□ -0.92
USP11-211ENST00000489111 MKLN1Q9UL63 735 aa9.3□□□□□ -0.92
USP11-211ENST00000489111 ZNF232Q9UNY5 417 aa9.3□□□□□ -0.92
USP11-211ENST00000489111 DTX4Q9Y2E6 619 aa9.3□□□□□ -0.92
USP11-211ENST00000489111 SLC9A8Q9Y2E8 581 aa9.3□□□□□ -0.92
USP11-211ENST00000489111 IFT52Q9Y366 437 aa9.3□□□□□ -0.92
USP11-211ENST00000489111 SH3GLB1Q9Y371 365 aa9.3□□□□□ -0.92
USP11-211ENST00000489111 FAM32AQ9Y421 112 aaKnown RBP9.3□□□□□ -0.92
USP11-211ENST00000489111 DNAH14Q0VDD8 3507 aa9.3□□□□□ -0.92
USP11-211ENST00000489111 RP1P56715 2156 aa9.3□□□□□ -0.92
USP11-211ENST00000489111 MUC6Q6W4X9 2439 aa9.29□□□□□ -0.92
USP11-211ENST00000489111 IGHV3-20A0A0C4DH32 117 aa9.29□□□□□ -0.92
USP11-211ENST00000489111 C2orf92A0A1B0GVN3 265 aa9.29□□□□□ -0.92
USP11-211ENST00000489111 FRG2CA6NGY1 282 aa9.29□□□□□ -0.92
USP11-211ENST00000489111 C9orf172C9J069 976 aa9.29□□□□□ -0.92
USP11-211ENST00000489111 SYT5O00445 386 aa9.29□□□□□ -0.92
USP11-211ENST00000489111 KCNK2O95069 426 aa9.29□□□□□ -0.92
USP11-211ENST00000489111 TNFSF15O95150 251 aa9.29□□□□□ -0.92
USP11-211ENST00000489111 CLPSP04118 112 aa9.29□□□□□ -0.92
USP11-211ENST00000489111 FESP07332 822 aa9.29□□□□□ -0.92
USP11-211ENST00000489111 PABPC4LP0CB38 370 aaKnown RBP9.29□□□□□ -0.92
USP11-211ENST00000489111 CEACAM1P13688 526 aa9.29□□□□□ -0.92
USP11-211ENST00000489111 ZNF23P17027 643 aa9.29□□□□□ -0.92
USP11-211ENST00000489111 TNFRSF1BP20333 461 aa9.29□□□□□ -0.92
USP11-211ENST00000489111 PRKAR1BP31321 381 aa9.29□□□□□ -0.92
USP11-211ENST00000489111 KRT20P35900 424 aa9.29□□□□□ -0.92
USP11-211ENST00000489111 PIGAP37287 484 aa9.29□□□□□ -0.92
USP11-211ENST00000489111 MAP3K8P41279 467 aa9.29□□□□□ -0.92
USP11-211ENST00000489111 PPICP45877 212 aa9.29□□□□□ -0.92
USP11-211ENST00000489111 OR1E2P47887 323 aa9.29□□□□□ -0.92
USP11-211ENST00000489111 KCNJ5P48544 419 aa9.29□□□□□ -0.92
USP11-211ENST00000489111 PSMD4P55036 377 aaKnown RBP9.29□□□□□ -0.92
USP11-211ENST00000489111 VLDLRP98155 873 aa9.29□□□□□ -0.92
USP11-211ENST00000489111 PSG6Q00889 435 aa9.29□□□□□ -0.92
USP11-211ENST00000489111 TARDBPQ13148 414 aaKnown RBP eCLIP9.29□□□□□ -0.92
USP11-211ENST00000489111 GPR68Q15743 365 aa9.29□□□□□ -0.92
USP11-211ENST00000489111 DECR1Q16698 335 aa9.29□□□□□ -0.92
USP11-211ENST00000489111 CYP27C1Q4G0S4 372 aa9.29□□□□□ -0.92
USP11-211ENST00000489111 FLYWCH1Q4VC44 716 aa9.29□□□□□ -0.92
USP11-211ENST00000489111 LIN52Q52LA3 116 aa9.29□□□□□ -0.92
USP11-211ENST00000489111 OR2T5Q6IEZ7 315 aa9.29□□□□□ -0.92
USP11-211ENST00000489111 TYW3Q6IPR3 259 aaKnown RBP9.29□□□□□ -0.92
USP11-211ENST00000489111 ZNF517Q6ZMY9 492 aaPredicted RBP9.29□□□□□ -0.92
USP11-211ENST00000489111 PIWIL3Q7Z3Z3 882 aaKnown RBP9.29□□□□□ -0.92
USP11-211ENST00000489111 HMGN2P46Q86SG4 172 aa9.29□□□□□ -0.92
USP11-211ENST00000489111 TMPRSS12Q86WS5 348 aa9.29□□□□□ -0.92
USP11-211ENST00000489111 CARM1Q86X55 608 aa9.29□□□□□ -0.92
USP11-211ENST00000489111 ZNF321PQ8N8H1 164 aa9.29□□□□□ -0.92
USP11-211ENST00000489111 B3GNT7Q8NFL0 401 aa9.29□□□□□ -0.92
USP11-211ENST00000489111 OR1N1Q8NGS0 311 aa9.29□□□□□ -0.92
USP11-211ENST00000489111 OR2Y1Q8NGV0 311 aa9.29□□□□□ -0.92
USP11-211ENST00000489111 OR2T29Q8NH02 315 aa9.29□□□□□ -0.92
USP11-211ENST00000489111 VANGL1Q8TAA9 524 aaPredicted RBP9.29□□□□□ -0.92
USP11-211ENST00000489111 ZNF721Q8TF20 911 aa9.29□□□□□ -0.92
USP11-211ENST00000489111 CT55Q8WUE5 264 aa9.29□□□□□ -0.92
USP11-211ENST00000489111 ZNF354BQ96LW1 612 aa9.29□□□□□ -0.92
USP11-211ENST00000489111 ZNF184Q99676 751 aaPredicted RBP9.29□□□□□ -0.92
USP11-211ENST00000489111 NUDT9Q9BW91 350 aa9.29□□□□□ -0.92
USP11-211ENST00000489111 QRSL1Q9H0R6 528 aaKnown RBP9.29□□□□□ -0.92
USP11-211ENST00000489111 ARMC7Q9H6L4 198 aa9.29□□□□□ -0.92
USP11-211ENST00000489111 REEP1Q9H902 201 aa9.29□□□□□ -0.92
USP11-211ENST00000489111 AKIRIN1Q9H9L7 192 aaPredicted RBP9.29□□□□□ -0.92
USP11-211ENST00000489111 C8orf4Q9NR00 106 aa9.29□□□□□ -0.92
USP11-211ENST00000489111 THSD1Q9NS62 852 aa9.29□□□□□ -0.92
USP11-211ENST00000489111 FOXJ2Q9P0K8 574 aa9.29□□□□□ -0.92
USP11-211ENST00000489111 MRTO4Q9UKD2 239 aaKnown RBP9.29□□□□□ -0.92
USP11-211ENST00000489111 PRDM4Q9UKN5 801 aa9.29□□□□□ -0.92
USP11-211ENST00000489111 CBLCQ9ULV8 474 aa9.29□□□□□ -0.92
USP11-211ENST00000489111 OAZ3Q9UMX2 235 aa9.29□□□□□ -0.92
USP11-211ENST00000489111 ABCG2Q9UNQ0 655 aa9.29□□□□□ -0.92
USP11-211ENST00000489111 ZNF443Q9Y2A4 671 aaPredicted RBP9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms