RNA–Protein interactions for RNA: ENST00000489108.1

USP48-210, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 443 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-210ENST00000489108 GOLGA6L10A0A0M3HER8 536 aa14.49□□□□□ -0.09
USP48-210ENST00000489108 OR2M5A3KFT3 312 aa14.49□□□□□ -0.09
USP48-210ENST00000489108 GOLGA6L10A6NI86 522 aa14.49□□□□□ -0.09
USP48-210ENST00000489108 CLOCKO15516 846 aa14.49□□□□□ -0.09
USP48-210ENST00000489108 CT45A8P0DMV1 189 aa14.49□□□□□ -0.09
USP48-210ENST00000489108 CT45A9P0DMV2 189 aa14.49□□□□□ -0.09
USP48-210ENST00000489108 PCSK2P16519 638 aa14.49□□□□□ -0.09
USP48-210ENST00000489108 CSNK2A2P19784 350 aaPredicted RBP14.49□□□□□ -0.09
USP48-210ENST00000489108 CDC25BP30305 580 aa14.49□□□□□ -0.09
USP48-210ENST00000489108 SLC6A8P48029 635 aa14.49□□□□□ -0.09
USP48-210ENST00000489108 RAB10P61026 200 aa14.49□□□□□ -0.09
USP48-210ENST00000489108 MRPS35P82673 323 aaKnown RBP14.49□□□□□ -0.09
USP48-210ENST00000489108 ILF2Q12905 390 aaKnown RBP14.49□□□□□ -0.09
USP48-210ENST00000489108 EFR3AQ14156 821 aa14.49□□□□□ -0.09
USP48-210ENST00000489108 LTB4RQ15722 352 aa14.49□□□□□ -0.09
USP48-210ENST00000489108 ZKSCAN8Q15776 578 aaPredicted RBP14.49□□□□□ -0.09
USP48-210ENST00000489108 SGCBQ16585 318 aa14.49□□□□□ -0.09
USP48-210ENST00000489108 CT45A2Q5DJT8 189 aa14.49□□□□□ -0.09
USP48-210ENST00000489108 FAM180BQ6P0A1 224 aa14.49□□□□□ -0.09
USP48-210ENST00000489108 SLC48A1Q6P1K1 146 aa14.49□□□□□ -0.09
USP48-210ENST00000489108 LARP4Q71RC2 724 aaKnown RBP eCLIP14.49□□□□□ -0.09
USP48-210ENST00000489108 FADS6Q8N9I5 356 aa14.49□□□□□ -0.09
USP48-210ENST00000489108 OR2M3Q8NG83 312 aa14.49□□□□□ -0.09
USP48-210ENST00000489108 OR6K3Q8NGY3 331 aa14.49□□□□□ -0.09
USP48-210ENST00000489108 ACTRT1Q8TDG2 376 aa14.49□□□□□ -0.09
USP48-210ENST00000489108 RNF138Q8WVD3 245 aa14.49□□□□□ -0.09
USP48-210ENST00000489108 KCNK17Q96T54 332 aa14.49□□□□□ -0.09
USP48-210ENST00000489108 SERPINI1Q99574 410 aa14.49□□□□□ -0.09
USP48-210ENST00000489108 NTMT1Q9BV86 223 aa14.49□□□□□ -0.09
USP48-210ENST00000489108 AMBRA1Q9C0C7 1298 aa14.49□□□□□ -0.09
USP48-210ENST00000489108 MED11Q9P086 117 aa14.49□□□□□ -0.09
USP48-210ENST00000489108 PPP4R1LQ9P1A2 415 aa14.49□□□□□ -0.09
USP48-210ENST00000489108 EMC9Q9Y3B6 208 aa14.49□□□□□ -0.09
USP48-210ENST00000489108 JRKLQ9Y4A0 524 aa14.49□□□□□ -0.09
USP48-210ENST00000489108 RNF115Q9Y4L5 304 aa14.49□□□□□ -0.09
USP48-210ENST00000489108 WIPF1O43516 503 aa14.48□□□□□ -0.09
USP48-210ENST00000489108 KERAO60938 352 aa14.48□□□□□ -0.09
USP48-210ENST00000489108 SEMA3DO95025 777 aa14.48□□□□□ -0.09
USP48-210ENST00000489108 ALDOAP04075 364 aaKnown RBP14.48□□□□□ -0.09
USP48-210ENST00000489108 MTHFD2P13995 350 aa14.48□□□□□ -0.09
USP48-210ENST00000489108 IL11P20809 199 aa14.48□□□□□ -0.09
USP48-210ENST00000489108 CORO7P57737 925 aa14.48□□□□□ -0.09
USP48-210ENST00000489108 RPS3AP61247 264 aaKnown RBP14.48□□□□□ -0.09
USP48-210ENST00000489108 ZNF844Q08AG5 666 aa14.48□□□□□ -0.09
USP48-210ENST00000489108 CCNYL2Q5T2Q4 361 aa14.48□□□□□ -0.09
USP48-210ENST00000489108 PPP4R4Q6NUP7 873 aa14.48□□□□□ -0.09
USP48-210ENST00000489108 METTL25Q8N6Q8 603 aa14.48□□□□□ -0.09
USP48-210ENST00000489108 RBBP8Q99708 897 aa14.48□□□□□ -0.09
USP48-210ENST00000489108 PRRG4Q9BZD6 226 aa14.48□□□□□ -0.09
USP48-210ENST00000489108 STMN4Q9H169 189 aaPredicted RBP14.48□□□□□ -0.09
USP48-210ENST00000489108 NMRAL1Q9HBL8 299 aa14.48□□□□□ -0.09
USP48-210ENST00000489108 GPR52Q9Y2T5 361 aa14.48□□□□□ -0.09
USP48-210ENST00000489108 IGHV4-30-2A0A087WSY4 118 aa14.47□□□□□ -0.09
USP48-210ENST00000489108 A0A1W2PP18 115 aa14.47□□□□□ -0.09
USP48-210ENST00000489108 C1orf226A1L170 272 aa14.47□□□□□ -0.09
USP48-210ENST00000489108 SCO2O43819 266 aa14.47□□□□□ -0.09
USP48-210ENST00000489108 UGDHO60701 494 aa14.47□□□□□ -0.09
USP48-210ENST00000489108 IL12BP29460 328 aa14.47□□□□□ -0.09
USP48-210ENST00000489108 KRT20P35900 424 aa14.47□□□□□ -0.09
USP48-210ENST00000489108 PNLIPRP2P54317 469 aa14.47□□□□□ -0.09
USP48-210ENST00000489108 CTBP2P56545 445 aa14.47□□□□□ -0.09
USP48-210ENST00000489108 PGGHGQ32M88 737 aa14.47□□□□□ -0.09
USP48-210ENST00000489108 NCMAPQ5T1S8 102 aa14.47□□□□□ -0.09
USP48-210ENST00000489108 BEND4Q6ZU67 534 aa14.47□□□□□ -0.09
USP48-210ENST00000489108 L3MBTL4Q8NA19 623 aa14.47□□□□□ -0.09
USP48-210ENST00000489108 GFM2Q969S9 779 aaKnown RBP14.47□□□□□ -0.09
USP48-210ENST00000489108 EFHD2Q96C19 240 aaPredicted RBP14.47□□□□□ -0.09
USP48-210ENST00000489108 HS6ST2Q96MM7 605 aa14.47□□□□□ -0.09
USP48-210ENST00000489108 BTBD9Q96Q07 612 aa14.47□□□□□ -0.09
USP48-210ENST00000489108 RHNO1Q9BSD3 238 aa14.47□□□□□ -0.09
USP48-210ENST00000489108 TACO1Q9BSH4 297 aaKnown RBP14.47□□□□□ -0.09
USP48-210ENST00000489108 MRPL1Q9BYD6 325 aaKnown RBP14.47□□□□□ -0.09
USP48-210ENST00000489108 OR10A4Q9H209 315 aa14.47□□□□□ -0.09
USP48-210ENST00000489108 IPPKQ9H8X2 491 aa14.47□□□□□ -0.09
USP48-210ENST00000489108 FANCFQ9NPI8 374 aa14.47□□□□□ -0.09
USP48-210ENST00000489108 WHRNQ9P202 907 aa14.47□□□□□ -0.09
USP48-210ENST00000489108 TXNDC16Q9P2K2 825 aa14.47□□□□□ -0.09
USP48-210ENST00000489108 ADAM29Q9UKF5 820 aa14.47□□□□□ -0.09
USP48-210ENST00000489108 A0A096LNT2 108 aa14.46□□□□□ -0.09
USP48-210ENST00000489108 E7ESA3 106 aa14.46□□□□□ -0.09
USP48-210ENST00000489108 LINC01387J3KSC0 135 aa14.46□□□□□ -0.09
USP48-210ENST00000489108 SSX4O60224 188 aa14.46□□□□□ -0.09
USP48-210ENST00000489108 PLGP00747 810 aaPredicted RBP14.46□□□□□ -0.09
USP48-210ENST00000489108 CD8AP01732 235 aa14.46□□□□□ -0.09
USP48-210ENST00000489108 CD3EP07766 207 aa14.46□□□□□ -0.09
USP48-210ENST00000489108 FCGR2AP12318 317 aa14.46□□□□□ -0.09
USP48-210ENST00000489108 SSTR1P30872 391 aa14.46□□□□□ -0.09
USP48-210ENST00000489108 MAPK12P53778 367 aa14.46□□□□□ -0.09
USP48-210ENST00000489108 GTF2H2Q13888 395 aa14.46□□□□□ -0.09
USP48-210ENST00000489108 PFKFB4Q16877 469 aa14.46□□□□□ -0.09
USP48-210ENST00000489108 CPEB4Q17RY0 729 aaKnown RBP eCLIP14.46□□□□□ -0.09
USP48-210ENST00000489108 TMEM249Q2WGJ8 235 aa14.46□□□□□ -0.09
USP48-210ENST00000489108 ZNF672Q499Z4 452 aaPredicted RBP14.46□□□□□ -0.09
USP48-210ENST00000489108 GTF2H2CQ6P1K8 395 aa14.46□□□□□ -0.09
USP48-210ENST00000489108 NPSR1Q6W5P4 371 aa14.46□□□□□ -0.09
USP48-210ENST00000489108 RAPH1Q70E73 1250 aa14.46□□□□□ -0.09
USP48-210ENST00000489108 GOLGA7Q7Z5G4 137 aa14.46□□□□□ -0.09
USP48-210ENST00000489108 CMC1Q7Z7K0 106 aa14.46□□□□□ -0.09
USP48-210ENST00000489108 ZBED8Q8IZ13 594 aa14.46□□□□□ -0.09
USP48-210ENST00000489108 OR4N2Q8NGD1 307 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms