RNA–Protein interactions for RNA: ENST00000488905.1

HDAC6-231, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 492 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-231ENST00000488905 HEATR5AQ86XA9 2040 aa16.69■□□□□ 0.26
HDAC6-231ENST00000488905 TNFSF12-TNFSF13A0A0A6YY99 330 aa16.68■□□□□ 0.26
HDAC6-231ENST00000488905 A0A1W2PNV4 684 aa16.68■□□□□ 0.26
HDAC6-231ENST00000488905 TNFSF13O75888 250 aa16.68■□□□□ 0.26
HDAC6-231ENST00000488905 SUPT7LO94864 414 aa16.68■□□□□ 0.26
HDAC6-231ENST00000488905 CD53P19397 219 aa16.68■□□□□ 0.26
HDAC6-231ENST00000488905 TAC1P20366 129 aa16.68■□□□□ 0.26
HDAC6-231ENST00000488905 ECHS1P30084 290 aa16.68■□□□□ 0.26
HDAC6-231ENST00000488905 HMOX2P30519 316 aa16.68■□□□□ 0.26
HDAC6-231ENST00000488905 HTR6P50406 440 aa16.68■□□□□ 0.26
HDAC6-231ENST00000488905 GAS1P54826 345 aa16.68■□□□□ 0.26
HDAC6-231ENST00000488905 EEF1A1P68104 462 aaKnown RBP16.68■□□□□ 0.26
HDAC6-231ENST00000488905 ACSM2AQ08AH3 577 aa16.68■□□□□ 0.26
HDAC6-231ENST00000488905 HEPACAMQ14CZ8 416 aa16.68■□□□□ 0.26
HDAC6-231ENST00000488905 UNC50Q53HI1 259 aa16.68■□□□□ 0.26
HDAC6-231ENST00000488905 EEF1A1P5Q5VTE0 462 aa16.68■□□□□ 0.26
HDAC6-231ENST00000488905 ACSM2BQ68CK6 577 aa16.68■□□□□ 0.26
HDAC6-231ENST00000488905 GPRIN3Q6ZVF9 776 aa16.68■□□□□ 0.26
HDAC6-231ENST00000488905 KRTAP1-3Q8IUG1 177 aa16.68■□□□□ 0.26
HDAC6-231ENST00000488905 UHMK1Q8TAS1 419 aaKnown RBP16.68■□□□□ 0.26
HDAC6-231ENST00000488905 EFHD2Q96C19 240 aaPredicted RBP16.68■□□□□ 0.26
HDAC6-231ENST00000488905 NEUROD4Q9HD90 331 aa16.68■□□□□ 0.26
HDAC6-231ENST00000488905 BEX4Q9NWD9 120 aaPredicted RBP16.68■□□□□ 0.26
HDAC6-231ENST00000488905 SENP1Q9P0U3 644 aa16.68■□□□□ 0.26
HDAC6-231ENST00000488905 MRPS18CQ9Y3D5 142 aaKnown RBP16.68■□□□□ 0.26
HDAC6-231ENST00000488905 TESMINQ9Y4I5 508 aa16.68■□□□□ 0.26
HDAC6-231ENST00000488905 DSCAMO60469 2012 aa16.67■□□□□ 0.26
HDAC6-231ENST00000488905 A0A087WUV0 522 aaPredicted RBP16.67■□□□□ 0.26
HDAC6-231ENST00000488905 A8MXE2 369 aa16.67■□□□□ 0.26
HDAC6-231ENST00000488905 PLOD3O60568 738 aa16.67■□□□□ 0.26
HDAC6-231ENST00000488905 ULK1O75385 1050 aa16.67■□□□□ 0.26
HDAC6-231ENST00000488905 TGM6O95932 706 aa16.67■□□□□ 0.26
HDAC6-231ENST00000488905 SNRPAP09012 282 aaKnown RBP16.67■□□□□ 0.26
HDAC6-231ENST00000488905 DPP4P27487 766 aa16.67■□□□□ 0.26
HDAC6-231ENST00000488905 HOXC12P31275 282 aa16.67■□□□□ 0.26
HDAC6-231ENST00000488905 TIA1P31483 386 aaKnown RBP eCLIP16.67■□□□□ 0.26
HDAC6-231ENST00000488905 PNLIPRP2P54317 469 aa16.67■□□□□ 0.26
HDAC6-231ENST00000488905 BIVMQ86UB2 503 aa16.67■□□□□ 0.26
HDAC6-231ENST00000488905 FAM9CQ8IZT9 166 aa16.67■□□□□ 0.26
HDAC6-231ENST00000488905 OR7G2Q8NG99 324 aa16.67■□□□□ 0.26
HDAC6-231ENST00000488905 OR4K17Q8NGC6 315 aa16.67■□□□□ 0.26
HDAC6-231ENST00000488905 METTL6Q8TCB7 284 aa16.67■□□□□ 0.26
HDAC6-231ENST00000488905 C16orf78Q8WTQ4 265 aa16.67■□□□□ 0.26
HDAC6-231ENST00000488905 IFT81Q8WYA0 676 aa16.67■□□□□ 0.26
HDAC6-231ENST00000488905 MTBPQ96DY7 904 aa16.67■□□□□ 0.26
HDAC6-231ENST00000488905 APIPQ96GX9 242 aa16.67■□□□□ 0.26
HDAC6-231ENST00000488905 EBPLQ9BY08 206 aa16.67■□□□□ 0.26
HDAC6-231ENST00000488905 STMN4Q9H169 189 aaPredicted RBP16.67■□□□□ 0.26
HDAC6-231ENST00000488905 SLC35C2Q9NQQ7 365 aa16.67■□□□□ 0.26
HDAC6-231ENST00000488905 RAI1Q7Z5J4 1906 aaPredicted RBP16.66■□□□□ 0.26
HDAC6-231ENST00000488905 TLN2Q9Y4G6 2542 aa16.66■□□□□ 0.26
HDAC6-231ENST00000488905 EXOC1LA0A1B0GW35 172 aa16.66■□□□□ 0.26
HDAC6-231ENST00000488905 C17orf51A8MQB3 221 aa16.66■□□□□ 0.26
HDAC6-231ENST00000488905 ZIC3O60481 467 aa16.66■□□□□ 0.26
HDAC6-231ENST00000488905 CTAGE8P0CG41 777 aa16.66■□□□□ 0.26
HDAC6-231ENST00000488905 EVI2BP34910 448 aa16.66■□□□□ 0.26
HDAC6-231ENST00000488905 DSCR4P56555 118 aaPredicted RBP16.66■□□□□ 0.26
HDAC6-231ENST00000488905 B3GALT5-AS1P59052 145 aa16.66■□□□□ 0.26
HDAC6-231ENST00000488905 MRPS22P82650 360 aaKnown RBP16.66■□□□□ 0.26
HDAC6-231ENST00000488905 ZNF155Q12901 538 aaPredicted RBP16.66■□□□□ 0.26
HDAC6-231ENST00000488905 WHAMMP3Q1A5X7 153 aa16.66■□□□□ 0.26
HDAC6-231ENST00000488905 P4HA3Q7Z4N8 544 aa16.66■□□□□ 0.26
HDAC6-231ENST00000488905 SLC44A2Q8IWA5 706 aaPredicted RBP16.66■□□□□ 0.26
HDAC6-231ENST00000488905 CTAGE4Q8IX94 777 aa16.66■□□□□ 0.26
HDAC6-231ENST00000488905 MMGT1Q8N4V1 131 aa16.66■□□□□ 0.26
HDAC6-231ENST00000488905 OR4N2Q8NGD1 307 aa16.66■□□□□ 0.26
HDAC6-231ENST00000488905 SHCBP1LQ9BZQ2 653 aa16.66■□□□□ 0.26
HDAC6-231ENST00000488905 TAS2R9Q9NYW1 312 aa16.66■□□□□ 0.26
HDAC6-231ENST00000488905 TMEM216Q9P0N5 145 aa16.66■□□□□ 0.26
HDAC6-231ENST00000488905 PPP4R1LQ9P1A2 415 aa16.66■□□□□ 0.26
HDAC6-231ENST00000488905 NDRG3Q9UGV2 375 aa16.66■□□□□ 0.26
HDAC6-231ENST00000488905 NFU1Q9UMS0 254 aa16.66■□□□□ 0.26
HDAC6-231ENST00000488905 EIF3LQ9Y262 564 aaKnown RBP16.66■□□□□ 0.26
HDAC6-231ENST00000488905 STK38LQ9Y2H1 464 aa16.66■□□□□ 0.26
HDAC6-231ENST00000488905 OR10H1Q9Y4A9 318 aa16.66■□□□□ 0.26
HDAC6-231ENST00000488905 ZANQ9Y493 2812 aa16.66■□□□□ 0.26
HDAC6-231ENST00000488905 SLC22A20A6NK97 555 aa16.65■□□□□ 0.26
HDAC6-231ENST00000488905 MSTNO14793 375 aa16.65■□□□□ 0.26
HDAC6-231ENST00000488905 CASKO14936 926 aa16.65■□□□□ 0.26
HDAC6-231ENST00000488905 SCO2O43819 266 aa16.65■□□□□ 0.26
HDAC6-231ENST00000488905 DLX3O60479 287 aa16.65■□□□□ 0.26
HDAC6-231ENST00000488905 COQ9O75208 318 aa16.65■□□□□ 0.26
HDAC6-231ENST00000488905 SMNDC1O75940 238 aaKnown RBP eCLIP16.65■□□□□ 0.261e-6■■□□□ 12.9
HDAC6-231ENST00000488905 URI1O94763 535 aaPredicted RBP16.65■□□□□ 0.26
HDAC6-231ENST00000488905 CRHP06850 196 aa16.65■□□□□ 0.26
HDAC6-231ENST00000488905 MPIP34949 423 aa16.65■□□□□ 0.26
HDAC6-231ENST00000488905 GSTM5P46439 218 aa16.65■□□□□ 0.26
HDAC6-231ENST00000488905 LCP2Q13094 533 aa16.65■□□□□ 0.26
HDAC6-231ENST00000488905 BCL2A1Q16548 175 aa16.65■□□□□ 0.26
HDAC6-231ENST00000488905 OR2A2Q6IF42 318 aa16.65■□□□□ 0.26
HDAC6-231ENST00000488905 GALNT18Q6P9A2 607 aa16.65■□□□□ 0.26
HDAC6-231ENST00000488905 VWA1Q6PCB0 445 aa16.65■□□□□ 0.26
HDAC6-231ENST00000488905 UBQLNLQ8IYU4 475 aa16.65■□□□□ 0.26
HDAC6-231ENST00000488905 FADS6Q8N9I5 356 aa16.65■□□□□ 0.26
HDAC6-231ENST00000488905 NOA1Q8NC60 698 aaKnown RBP16.65■□□□□ 0.26
HDAC6-231ENST00000488905 C11orf24Q96F05 449 aaPredicted RBP16.65■□□□□ 0.26
HDAC6-231ENST00000488905 C18orf12Q96KH6 178 aa16.65■□□□□ 0.26
HDAC6-231ENST00000488905 FN1P02751 2386 aaKnown RBP16.64■□□□□ 0.25
HDAC6-231ENST00000488905 ENO1P06733 434 aaKnown RBP16.64■□□□□ 0.25
HDAC6-231ENST00000488905 PEPDP12955 493 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms