RNA–Protein interactions for RNA: ENST00000488860.1

TRAIP-209, Transcript of TRAF interacting protein, humanhuman

TSL 3

Gene TRAIP, Length 326 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-209ENST00000488860 DUSP22Q9NRW4 184 aa11.38□□□□□ -0.59
TRAIP-209ENST00000488860 TAS2R1Q9NYW7 299 aa11.38□□□□□ -0.59
TRAIP-209ENST00000488860 ABI3Q9P2A4 366 aa11.38□□□□□ -0.59
TRAIP-209ENST00000488860 GMPR2Q9P2T1 348 aaKnown RBP11.38□□□□□ -0.59
TRAIP-209ENST00000488860 TEKT2Q9UIF3 430 aa11.38□□□□□ -0.59
TRAIP-209ENST00000488860 USP22Q9UPT9 525 aa11.38□□□□□ -0.59
TRAIP-209ENST00000488860 PCDHGB3Q9Y5G1 929 aa11.38□□□□□ -0.59
TRAIP-209ENST00000488860 FAM220BPB1ANY3 271 aa11.37□□□□□ -0.59
TRAIP-209ENST00000488860 C5orf58C9J3I9 102 aa11.37□□□□□ -0.59
TRAIP-209ENST00000488860 ACOX3O15254 700 aa11.37□□□□□ -0.59
TRAIP-209ENST00000488860 TNFRSF21O75509 655 aa11.37□□□□□ -0.59
TRAIP-209ENST00000488860 REM1O75628 298 aa11.37□□□□□ -0.59
TRAIP-209ENST00000488860 PDE5AO76074 875 aa11.37□□□□□ -0.59
TRAIP-209ENST00000488860 NADKO95544 446 aaPredicted RBP11.37□□□□□ -0.59
TRAIP-209ENST00000488860 F10P00742 488 aa11.37□□□□□ -0.59
TRAIP-209ENST00000488860 GPX2P18283 190 aa11.37□□□□□ -0.59
TRAIP-209ENST00000488860 TCN1P20061 433 aaPredicted RBP11.37□□□□□ -0.59
TRAIP-209ENST00000488860 ABCD3P28288 659 aa11.37□□□□□ -0.59
TRAIP-209ENST00000488860 SOX3P41225 446 aa11.37□□□□□ -0.59
TRAIP-209ENST00000488860 MAP3K8P41279 467 aa11.37□□□□□ -0.59
TRAIP-209ENST00000488860 FUT5Q11128 374 aa11.37□□□□□ -0.59
TRAIP-209ENST00000488860 SYPL1Q16563 259 aa11.37□□□□□ -0.59
TRAIP-209ENST00000488860 ZSCAN26Q16670 478 aa11.37□□□□□ -0.59
TRAIP-209ENST00000488860 DECR1Q16698 335 aa11.37□□□□□ -0.59
TRAIP-209ENST00000488860 PIGGQ5H8A4 983 aa11.37□□□□□ -0.59
TRAIP-209ENST00000488860 CRB2Q5IJ48 1285 aa11.37□□□□□ -0.59
TRAIP-209ENST00000488860 RPS26P11Q5JNZ5 115 aaPredicted RBP11.37□□□□□ -0.59
TRAIP-209ENST00000488860 ACER2Q5QJU3 275 aa11.37□□□□□ -0.59
TRAIP-209ENST00000488860 EXOSC6Q5RKV6 272 aaKnown RBP11.37□□□□□ -0.59
TRAIP-209ENST00000488860 AGAP7PQ5VUJ5 663 aa11.37□□□□□ -0.59
TRAIP-209ENST00000488860 H3F3CQ6NXT2 135 aa11.37□□□□□ -0.59
TRAIP-209ENST00000488860 APLFQ8IW19 511 aaPredicted RBP11.37□□□□□ -0.59
TRAIP-209ENST00000488860 BEST3Q8N1M1 668 aa11.37□□□□□ -0.59
TRAIP-209ENST00000488860 TMEM156Q8N614 296 aa11.37□□□□□ -0.59
TRAIP-209ENST00000488860 BCORP1Q8N888 145 aa11.37□□□□□ -0.59
TRAIP-209ENST00000488860 ANKFN1Q8N957 763 aa11.37□□□□□ -0.59
TRAIP-209ENST00000488860 OR5M3Q8NGP4 307 aa11.37□□□□□ -0.59
TRAIP-209ENST00000488860 PSMF1Q92530 271 aa11.37□□□□□ -0.59
TRAIP-209ENST00000488860 HOXB13Q92826 284 aaPredicted RBP11.37□□□□□ -0.59
TRAIP-209ENST00000488860 SLC7A6OSQ96CW6 309 aaPredicted RBP11.37□□□□□ -0.59
TRAIP-209ENST00000488860 TMEM19Q96HH6 336 aa11.37□□□□□ -0.59
TRAIP-209ENST00000488860 AGAP4Q96P64 663 aa11.37□□□□□ -0.59
TRAIP-209ENST00000488860 CDRT15Q96T59 188 aa11.37□□□□□ -0.59
TRAIP-209ENST00000488860 KCTD14Q9BQ13 255 aaPredicted RBP11.37□□□□□ -0.59
TRAIP-209ENST00000488860 BTBD10Q9BSF8 475 aa11.37□□□□□ -0.59
TRAIP-209ENST00000488860 THTPAQ9BU02 230 aa11.37□□□□□ -0.59
TRAIP-209ENST00000488860 C1orf21Q9H246 121 aa11.37□□□□□ -0.59
TRAIP-209ENST00000488860 ALG2Q9H553 416 aa11.37□□□□□ -0.59
TRAIP-209ENST00000488860 GIN1Q9NXP7 522 aa11.37□□□□□ -0.59
TRAIP-209ENST00000488860 ANKRD10Q9NXR5 420 aa11.37□□□□□ -0.59
TRAIP-209ENST00000488860 TMEM181Q9P2C4 612 aa11.37□□□□□ -0.59
TRAIP-209ENST00000488860 ABCD2Q9UBJ2 740 aa11.37□□□□□ -0.59
TRAIP-209ENST00000488860 MRTO4Q9UKD2 239 aaKnown RBP11.37□□□□□ -0.59
TRAIP-209ENST00000488860 AP3M1Q9Y2T2 418 aa11.37□□□□□ -0.59
TRAIP-209ENST00000488860 YARS2Q9Y2Z4 477 aaKnown RBP11.37□□□□□ -0.59
TRAIP-209ENST00000488860 NPFFR2Q9Y5X5 522 aa11.37□□□□□ -0.59
TRAIP-209ENST00000488860 PTPRQQ9UMZ3 2332 aa11.36□□□□□ -0.59
TRAIP-209ENST00000488860 NPIPA5A0A0B4J1W7 369 aa11.36□□□□□ -0.59
TRAIP-209ENST00000488860 NPIPA7E9PJI5 369 aa11.36□□□□□ -0.59
TRAIP-209ENST00000488860 TO15178 435 aa11.36□□□□□ -0.59
TRAIP-209ENST00000488860 ZNF354AO60765 605 aaPredicted RBP11.36□□□□□ -0.59
TRAIP-209ENST00000488860 OR6B1O95007 311 aa11.36□□□□□ -0.59
TRAIP-209ENST00000488860 KCNK2O95069 426 aa11.36□□□□□ -0.59
TRAIP-209ENST00000488860 AK1P00568 194 aa11.36□□□□□ -0.59
TRAIP-209ENST00000488860 IGKV1D-16P01601 117 aa11.36□□□□□ -0.59
TRAIP-209ENST00000488860 ALPPP05187 535 aa11.36□□□□□ -0.59
TRAIP-209ENST00000488860 NPIPA8P0DM63 369 aa11.36□□□□□ -0.59
TRAIP-209ENST00000488860 ARAFP10398 606 aa11.36□□□□□ -0.59
TRAIP-209ENST00000488860 ATP6V1C1P21283 382 aa11.36□□□□□ -0.59
TRAIP-209ENST00000488860 PIGAP37287 484 aa11.36□□□□□ -0.59
TRAIP-209ENST00000488860 CASRP41180 1078 aa11.36□□□□□ -0.59
TRAIP-209ENST00000488860 MAGEA8P43361 318 aa11.36□□□□□ -0.59
TRAIP-209ENST00000488860 TMED10P49755 219 aaKnown RBP11.36□□□□□ -0.59
TRAIP-209ENST00000488860 GSK3BP49841 420 aa11.36□□□□□ -0.59
TRAIP-209ENST00000488860 EEFSECP57772 596 aaKnown RBP11.36□□□□□ -0.59
TRAIP-209ENST00000488860 FOXK2Q01167 660 aa11.36□□□□□ -0.59
TRAIP-209ENST00000488860 OC90Q02509 493 aaPredicted RBP11.36□□□□□ -0.59
TRAIP-209ENST00000488860 SCARB2Q14108 478 aa11.36□□□□□ -0.59
TRAIP-209ENST00000488860 TBR1Q16650 682 aa11.36□□□□□ -0.59
TRAIP-209ENST00000488860 CYP27C1Q4G0S4 372 aa11.36□□□□□ -0.59
TRAIP-209ENST00000488860 SAMD4BQ5PRF9 694 aaKnown RBP11.36□□□□□ -0.59
TRAIP-209ENST00000488860 OPN5Q6U736 354 aa11.36□□□□□ -0.59
TRAIP-209ENST00000488860 ISLR2Q6UXK2 745 aa11.36□□□□□ -0.59
TRAIP-209ENST00000488860 IL20RBQ6UXL0 311 aa11.36□□□□□ -0.59
TRAIP-209ENST00000488860 HMGN2P46Q86SG4 172 aa11.36□□□□□ -0.59
TRAIP-209ENST00000488860 SERPINA11Q86U17 422 aa11.36□□□□□ -0.59
TRAIP-209ENST00000488860 PTOV1Q86YD1 416 aa11.36□□□□□ -0.59
TRAIP-209ENST00000488860 ZZZ3Q8IYH5 903 aa11.36□□□□□ -0.59
TRAIP-209ENST00000488860 FAM156AQ8NDB6 213 aa11.36□□□□□ -0.59
TRAIP-209ENST00000488860 FAM13CQ8NE31 585 aa11.36□□□□□ -0.59
TRAIP-209ENST00000488860 OR2T12Q8NG77 320 aa11.36□□□□□ -0.59
TRAIP-209ENST00000488860 EXTL1Q92935 676 aa11.36□□□□□ -0.59
TRAIP-209ENST00000488860 MCUR1Q96AQ8 359 aa11.36□□□□□ -0.59
TRAIP-209ENST00000488860 REXO5Q96IC2 774 aaKnown RBP11.36□□□□□ -0.59
TRAIP-209ENST00000488860 CLPTM1LQ96KA5 538 aa11.36□□□□□ -0.59
TRAIP-209ENST00000488860 SPATA9Q9BWV2 254 aa11.36□□□□□ -0.59
TRAIP-209ENST00000488860 ZBTB20Q9HC78 741 aaPredicted RBP11.36□□□□□ -0.59
TRAIP-209ENST00000488860 A4GALTQ9NPC4 353 aa11.36□□□□□ -0.59
TRAIP-209ENST00000488860 HPF1Q9NWY4 346 aa11.36□□□□□ -0.59
TRAIP-209ENST00000488860 THUMPD1Q9NXG2 353 aaKnown RBP11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms