RNA–Protein interactions for RNA: ENST00000488596.5

CD46-215, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 872 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-215ENST00000488596 CCDC92Q53HC0 331 aaPredicted RBP2.46□□□□□ -2.02
CD46-215ENST00000488596 ATAD3CQ5T2N8 411 aa2.46□□□□□ -2.02
CD46-215ENST00000488596 DMKNQ6E0U4 476 aaPredicted RBP2.46□□□□□ -2.02
CD46-215ENST00000488596 BTNL3Q6UXE8 466 aa2.46□□□□□ -2.02
CD46-215ENST00000488596 HACD2Q6Y1H2 254 aa2.46□□□□□ -2.02
CD46-215ENST00000488596 PAQR9Q6ZVX9 377 aa2.46□□□□□ -2.02
CD46-215ENST00000488596 MARCH9Q86YJ5 346 aa2.46□□□□□ -2.02
CD46-215ENST00000488596 CCDC36Q8IYA8 594 aa2.46□□□□□ -2.02
CD46-215ENST00000488596 KLHL30-AS1Q8NEE0 82 aa2.46□□□□□ -2.02
CD46-215ENST00000488596 C11orf24Q96F05 449 aaPredicted RBP2.46□□□□□ -2.02
CD46-215ENST00000488596 C14orf79Q96F83 325 aa2.46□□□□□ -2.02
CD46-215ENST00000488596 KCNK16Q96T55 309 aa2.46□□□□□ -2.02
CD46-215ENST00000488596 CARD6Q9BX69 1037 aa2.46□□□□□ -2.02
CD46-215ENST00000488596 KAT8Q9H7Z6 458 aaKnown RBP2.46□□□□□ -2.02
CD46-215ENST00000488596 ACTR8Q9H981 624 aa2.46□□□□□ -2.02
CD46-215ENST00000488596 FAM120CQ9NX05 1096 aaKnown RBP2.46□□□□□ -2.02
CD46-215ENST00000488596 DUS2Q9NX74 493 aaKnown RBP2.46□□□□□ -2.02
CD46-215ENST00000488596 ACTR3BQ9P1U1 418 aa2.46□□□□□ -2.02
CD46-215ENST00000488596 ZNF490Q9ULM2 529 aaPredicted RBP2.46□□□□□ -2.02
CD46-215ENST00000488596 NAALAD2Q9Y3Q0 740 aa2.46□□□□□ -2.02
CD46-215ENST00000488596 METP08581 1390 aa2.46□□□□□ -2.02
CD46-215ENST00000488596 RALGAPA1Q6GYQ0 2036 aa2.46□□□□□ -2.02
CD46-215ENST00000488596 E9PMD0 336 aa2.45□□□□□ -2.02
CD46-215ENST00000488596 G3V3Y1 287 aa2.45□□□□□ -2.02
CD46-215ENST00000488596 SGK494L7N484 410 aa2.45□□□□□ -2.02
CD46-215ENST00000488596 CASKO14936 926 aa2.45□□□□□ -2.02
CD46-215ENST00000488596 ALOX15BO15296 676 aa2.45□□□□□ -2.02
CD46-215ENST00000488596 LCMT2O60294 686 aaKnown RBP2.45□□□□□ -2.02
CD46-215ENST00000488596 AKR7A3O95154 331 aa2.45□□□□□ -2.02
CD46-215ENST00000488596 ANXA4P09525 319 aaPredicted RBP2.45□□□□□ -2.02
CD46-215ENST00000488596 RRASP10301 218 aa2.45□□□□□ -2.02
CD46-215ENST00000488596 PGAM2P15259 253 aa2.45□□□□□ -2.02
CD46-215ENST00000488596 PAICSP22234 425 aaKnown RBP2.45□□□□□ -2.02
CD46-215ENST00000488596 CD86P42081 329 aa2.45□□□□□ -2.02
CD46-215ENST00000488596 STK19P49842 368 aaPredicted RBP2.45□□□□□ -2.02
CD46-215ENST00000488596 MTTPP55157 894 aa2.45□□□□□ -2.02
CD46-215ENST00000488596 ZP4Q12836 540 aa2.45□□□□□ -2.02
CD46-215ENST00000488596 PEX6Q13608 980 aa2.45□□□□□ -2.02
CD46-215ENST00000488596 EXOSC2Q13868 293 aaKnown RBP2.45□□□□□ -2.02
CD46-215ENST00000488596 UBE2V2Q15819 145 aa2.45□□□□□ -2.02
CD46-215ENST00000488596 Q1RN00 199 aa2.45□□□□□ -2.02
CD46-215ENST00000488596 MARC1Q5VT66 337 aa2.45□□□□□ -2.02
CD46-215ENST00000488596 SLX4IPQ5VYV7 408 aa2.45□□□□□ -2.02
CD46-215ENST00000488596 RNLSQ5VYX0 342 aa2.45□□□□□ -2.02
CD46-215ENST00000488596 VITQ6UXI7 678 aa2.45□□□□□ -2.02
CD46-215ENST00000488596 UNC5DQ6UXZ4 953 aa2.45□□□□□ -2.02
CD46-215ENST00000488596 LPCAT2Q7L5N7 544 aa2.45□□□□□ -2.02
CD46-215ENST00000488596 NET1Q7Z628 596 aaPredicted RBP2.45□□□□□ -2.02
CD46-215ENST00000488596 SYVN1Q86TM6 617 aa2.45□□□□□ -2.02
CD46-215ENST00000488596 SERINC5Q86VE9 423 aa2.45□□□□□ -2.02
CD46-215ENST00000488596 CD177Q8N6Q3 437 aa2.45□□□□□ -2.02
CD46-215ENST00000488596 LINC00612Q8N6U2 182 aa2.45□□□□□ -2.02
CD46-215ENST00000488596 FNDC8Q8TC99 324 aa2.45□□□□□ -2.02
CD46-215ENST00000488596 SELENOMQ8WWX9 145 aa2.45□□□□□ -2.02
CD46-215ENST00000488596 ADIPOR1Q96A54 375 aa2.45□□□□□ -2.02
CD46-215ENST00000488596 TADA1Q96BN2 335 aa2.45□□□□□ -2.02
CD46-215ENST00000488596 SLC25A36Q96CQ1 311 aa2.45□□□□□ -2.02
CD46-215ENST00000488596 C9orf85Q96MD7 179 aa2.45□□□□□ -2.02
CD46-215ENST00000488596 RPAP3Q9H6T3 665 aaPredicted RBP2.45□□□□□ -2.02
CD46-215ENST00000488596 MEPEQ9NQ76 525 aaPredicted RBP2.45□□□□□ -2.02
CD46-215ENST00000488596 TRPV5Q9NQA5 729 aa2.45□□□□□ -2.02
CD46-215ENST00000488596 IMPAD1Q9NX62 359 aa2.45□□□□□ -2.02
CD46-215ENST00000488596 KLRF1Q9NZS2 232 aa2.45□□□□□ -2.02
CD46-215ENST00000488596 ABCD2Q9UBJ2 740 aa2.45□□□□□ -2.02
CD46-215ENST00000488596 BARX2Q9UMQ3 279 aaPredicted RBP2.45□□□□□ -2.02
CD46-215ENST00000488596 NTNG1Q9Y2I2 539 aa2.45□□□□□ -2.02
CD46-215ENST00000488596 DHRS7Q9Y394 339 aa2.45□□□□□ -2.02
CD46-215ENST00000488596 PARD3Q8TEW0 1356 aa2.45□□□□□ -2.02
CD46-215ENST00000488596 ATP8B3O60423 1300 aa2.44□□□□□ -2.02
CD46-215ENST00000488596 CFAP65Q6ZU64 1925 aaKnown RBP2.44□□□□□ -2.02
CD46-215ENST00000488596 HCFC1P51610 2035 aa2.44□□□□□ -2.02
CD46-215ENST00000488596 NCAPD2Q15021 1401 aa2.44□□□□□ -2.02
CD46-215ENST00000488596 A0A0U1RQV5 110 aa2.44□□□□□ -2.02
CD46-215ENST00000488596 FAM230AA0A1W2PPH8 454 aa2.44□□□□□ -2.02
CD46-215ENST00000488596 RNF222A6NCQ9 220 aa2.44□□□□□ -2.02
CD46-215ENST00000488596 FRG2CA6NGY1 282 aa2.44□□□□□ -2.02
CD46-215ENST00000488596 ANKRD30BLA7E2S9 258 aa2.44□□□□□ -2.02
CD46-215ENST00000488596 WASHC1A8K0Z3 465 aa2.44□□□□□ -2.02
CD46-215ENST00000488596 A8MX80 341 aa2.44□□□□□ -2.02
CD46-215ENST00000488596 WASH3PC4AMC7 463 aa2.44□□□□□ -2.02
CD46-215ENST00000488596 C19orf81C9J6K1 198 aa2.44□□□□□ -2.02
CD46-215ENST00000488596 H3BTX0 84 aa2.44□□□□□ -2.02
CD46-215ENST00000488596 PDXKO00764 312 aa2.44□□□□□ -2.02
CD46-215ENST00000488596 TSC22D2O75157 780 aa2.44□□□□□ -2.02
CD46-215ENST00000488596 VPS26AO75436 327 aa2.44□□□□□ -2.02
CD46-215ENST00000488596 SCGB2A1O75556 95 aa2.44□□□□□ -2.02
CD46-215ENST00000488596 TOM1L1O75674 476 aa2.44□□□□□ -2.02
CD46-215ENST00000488596 B3GALNT1O75752 331 aa2.44□□□□□ -2.02
CD46-215ENST00000488596 NOL4O94818 638 aa2.44□□□□□ -2.02
CD46-215ENST00000488596 NDUFA7O95182 113 aa2.44□□□□□ -2.02
CD46-215ENST00000488596 GJB5O95377 273 aa2.44□□□□□ -2.02
CD46-215ENST00000488596 SLC2A10O95528 541 aa2.44□□□□□ -2.02
CD46-215ENST00000488596 IGFBP1P08833 259 aaPredicted RBP2.44□□□□□ -2.02
CD46-215ENST00000488596 ARF4P18085 180 aaPredicted RBP2.44□□□□□ -2.02
CD46-215ENST00000488596 IL2RGP31785 369 aa2.44□□□□□ -2.02
CD46-215ENST00000488596 MAGEA9P43362 315 aa2.44□□□□□ -2.02
CD46-215ENST00000488596 OR1D4P47884 311 aa2.44□□□□□ -2.02
CD46-215ENST00000488596 METAP1P53582 386 aa2.44□□□□□ -2.02
CD46-215ENST00000488596 RPS6P62753 249 aaKnown RBP2.44□□□□□ -2.02
CD46-215ENST00000488596 PPIAP62937 165 aaKnown RBP2.44□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms