RNA–Protein interactions for RNA: ENST00000488427.1

ITGB1-214, Transcript of integrin subunit beta 1, humanhuman

TSL 1 (best)

Gene ITGB1, Length 861 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-214ENST00000488427 ASIC1P78348 528 aa3.39□□□□□ -1.87
ITGB1-214ENST00000488427 DEFB103AP81534 67 aa3.39□□□□□ -1.87
ITGB1-214ENST00000488427 GABPAQ06546 454 aa3.39□□□□□ -1.87
ITGB1-214ENST00000488427 TCP10Q12799 353 aa3.39□□□□□ -1.87
ITGB1-214ENST00000488427 RPS6KA1Q15418 735 aa3.39□□□□□ -1.87
ITGB1-214ENST00000488427 TYSND1Q2T9J0 566 aa3.39□□□□□ -1.87
ITGB1-214ENST00000488427 ZNF528Q3MIS6 628 aa3.39□□□□□ -1.87
ITGB1-214ENST00000488427 ARMCX5Q6P1M9 558 aa3.39□□□□□ -1.87
ITGB1-214ENST00000488427 CD164L2Q6UWJ8 174 aa3.39□□□□□ -1.87
ITGB1-214ENST00000488427 LINC00696Q6ZRV3 163 aa3.39□□□□□ -1.87
ITGB1-214ENST00000488427 THEM5Q8N1Q8 247 aa3.39□□□□□ -1.87
ITGB1-214ENST00000488427 TMCO5AQ8N6Q1 288 aa3.39□□□□□ -1.87
ITGB1-214ENST00000488427 ZNF781Q8N8C0 355 aa3.39□□□□□ -1.87
ITGB1-214ENST00000488427 SAMD12Q8N8I0 201 aa3.39□□□□□ -1.87
ITGB1-214ENST00000488427 PSMA8Q8TAA3 256 aa3.39□□□□□ -1.87
ITGB1-214ENST00000488427 ZPLD1Q8TCW7 415 aa3.39□□□□□ -1.87
ITGB1-214ENST00000488427 NABP1Q96AH0 204 aa3.39□□□□□ -1.87
ITGB1-214ENST00000488427 RCHY1Q96PM5 261 aa3.39□□□□□ -1.87
ITGB1-214ENST00000488427 THUMPD2Q9BTF0 503 aaKnown RBP3.39□□□□□ -1.87
ITGB1-214ENST00000488427 DPEP3Q9H4B8 488 aa3.39□□□□□ -1.87
ITGB1-214ENST00000488427 RNPEPL1Q9HAU8 725 aa3.39□□□□□ -1.87
ITGB1-214ENST00000488427 MRPL17Q9NRX2 175 aaKnown RBP3.39□□□□□ -1.87
ITGB1-214ENST00000488427 PRR34Q9NV39 138 aa3.39□□□□□ -1.87
ITGB1-214ENST00000488427 ANKMY1Q9P2S6 941 aa3.39□□□□□ -1.87
ITGB1-214ENST00000488427 KCNK6Q9Y257 313 aa3.39□□□□□ -1.87
ITGB1-214ENST00000488427 EXOC6BQ9Y2D4 811 aa3.39□□□□□ -1.87
ITGB1-214ENST00000488427 COL5A1P20908 1838 aaPredicted RBP3.39□□□□□ -1.87
ITGB1-214ENST00000488427 GOLGA4Q13439 2230 aaKnown RBP3.39□□□□□ -1.87
ITGB1-214ENST00000488427 ADAMTS9Q9P2N4 1935 aa3.38□□□□□ -1.87
ITGB1-214ENST00000488427 PLXNB3Q9ULL4 1909 aa3.38□□□□□ -1.87
ITGB1-214ENST00000488427 NUP205Q92621 2012 aa3.38□□□□□ -1.87
ITGB1-214ENST00000488427 LOC390937A0A1W2PQ73 354 aa3.38□□□□□ -1.87
ITGB1-214ENST00000488427 A0A1W2PRQ8 180 aa3.38□□□□□ -1.87
ITGB1-214ENST00000488427 FAM170AA1A519 330 aa3.38□□□□□ -1.87
ITGB1-214ENST00000488427 OR5H15A6NDH6 313 aa3.38□□□□□ -1.87
ITGB1-214ENST00000488427 RNF212BA8MTL3 300 aa3.38□□□□□ -1.87
ITGB1-214ENST00000488427 NEDD8-MDP1E9PL57 170 aa3.38□□□□□ -1.87
ITGB1-214ENST00000488427 CHUKO15111 745 aa3.38□□□□□ -1.87
ITGB1-214ENST00000488427 B4GAT1O43505 415 aa3.38□□□□□ -1.87
ITGB1-214ENST00000488427 RETP07949 1114 aa3.38□□□□□ -1.87
ITGB1-214ENST00000488427 STIP1P31948 543 aaKnown RBP3.38□□□□□ -1.87
ITGB1-214ENST00000488427 ALDH3B1P43353 468 aa3.38□□□□□ -1.87
ITGB1-214ENST00000488427 LCP2Q13094 533 aa3.38□□□□□ -1.87
ITGB1-214ENST00000488427 TMEM44Q2T9K0 475 aa3.38□□□□□ -1.87
ITGB1-214ENST00000488427 CNPY1Q3B7I2 92 aa3.38□□□□□ -1.87
ITGB1-214ENST00000488427 TEX35Q5T0J7 233 aa3.38□□□□□ -1.87
ITGB1-214ENST00000488427 VITQ6UXI7 678 aa3.38□□□□□ -1.87
ITGB1-214ENST00000488427 OTOAQ7RTW8 1153 aa3.38□□□□□ -1.87
ITGB1-214ENST00000488427 CACUL1Q86Y37 369 aa3.38□□□□□ -1.87
ITGB1-214ENST00000488427 HPS6Q86YV9 775 aa3.38□□□□□ -1.87
ITGB1-214ENST00000488427 CCDC197Q8NCU1 140 aa3.38□□□□□ -1.87
ITGB1-214ENST00000488427 GOT1L1Q8NHS2 421 aaPredicted RBP3.38□□□□□ -1.87
ITGB1-214ENST00000488427 GDAP1Q8TB36 358 aa3.38□□□□□ -1.87
ITGB1-214ENST00000488427 KIAA1524Q8TCG1 905 aa3.38□□□□□ -1.87
ITGB1-214ENST00000488427 SSC4DQ8WTU2 575 aa3.38□□□□□ -1.87
ITGB1-214ENST00000488427 GGHQ92820 318 aa3.38□□□□□ -1.87
ITGB1-214ENST00000488427 AP2M1Q96CW1 435 aa3.38□□□□□ -1.87
ITGB1-214ENST00000488427 APOL2Q9BQE5 337 aa3.38□□□□□ -1.87
ITGB1-214ENST00000488427 TRPV6Q9H1D0 765 aa3.38□□□□□ -1.87
ITGB1-214ENST00000488427 ZNF665Q9H7R5 613 aa3.38□□□□□ -1.87
ITGB1-214ENST00000488427 CUTCQ9NTM9 273 aa3.38□□□□□ -1.87
ITGB1-214ENST00000488427 BARX2Q9UMQ3 279 aaPredicted RBP3.38□□□□□ -1.87
ITGB1-214ENST00000488427 ANKHD1Q8IWZ3 2542 aaKnown RBP3.37□□□□□ -1.87
ITGB1-214ENST00000488427 GTPBP10A4D1E9 387 aaKnown RBP3.37□□□□□ -1.87
ITGB1-214ENST00000488427 CSDE1O75534 798 aaKnown RBP3.37□□□□□ -1.87
ITGB1-214ENST00000488427 OR6A2O95222 327 aa3.37□□□□□ -1.87
ITGB1-214ENST00000488427 DCNP07585 359 aaKnown RBP3.37□□□□□ -1.87
ITGB1-214ENST00000488427 FAM200BP0CF97 657 aa3.37□□□□□ -1.87
ITGB1-214ENST00000488427 HSD17B1P14061 328 aa3.37□□□□□ -1.87
ITGB1-214ENST00000488427 SELEP16581 610 aa3.37□□□□□ -1.87
ITGB1-214ENST00000488427 ATP5DP30049 168 aa3.37□□□□□ -1.87
ITGB1-214ENST00000488427 SLC12A3P55017 1021 aa3.37□□□□□ -1.87
ITGB1-214ENST00000488427 RPS27AP62979 156 aaKnown RBP3.37□□□□□ -1.87
ITGB1-214ENST00000488427 YWHAHQ04917 246 aaPredicted RBP3.37□□□□□ -1.87
ITGB1-214ENST00000488427 RUNX3Q13761 415 aa3.37□□□□□ -1.87
ITGB1-214ENST00000488427 MEF2DQ14814 521 aa3.37□□□□□ -1.87
ITGB1-214ENST00000488427 STXBP2Q15833 593 aa3.37□□□□□ -1.87
ITGB1-214ENST00000488427 ABRAXAS1Q6UWZ7 409 aa3.37□□□□□ -1.87
ITGB1-214ENST00000488427 GBP6Q6ZN66 633 aa3.37□□□□□ -1.87
ITGB1-214ENST00000488427 AQP12AQ8IXF9 295 aa3.37□□□□□ -1.87
ITGB1-214ENST00000488427 ZBED8Q8IZ13 594 aa3.37□□□□□ -1.87
ITGB1-214ENST00000488427 ARL14Q8N4G2 192 aa3.37□□□□□ -1.87
ITGB1-214ENST00000488427 ZBTB44Q8NCP5 570 aa3.37□□□□□ -1.87
ITGB1-214ENST00000488427 OR4Q3Q8NH05 313 aa3.37□□□□□ -1.87
ITGB1-214ENST00000488427 CDHR1Q96JP9 859 aa3.37□□□□□ -1.87
ITGB1-214ENST00000488427 S1PR3Q99500 378 aa3.37□□□□□ -1.87
ITGB1-214ENST00000488427 ZNF350Q9GZX5 532 aa3.37□□□□□ -1.87
ITGB1-214ENST00000488427 AKIRIN1Q9H9L7 192 aaPredicted RBP3.37□□□□□ -1.87
ITGB1-214ENST00000488427 CLEC5AQ9NY25 188 aa3.37□□□□□ -1.87
ITGB1-214ENST00000488427 HCFC1P51610 2035 aa3.37□□□□□ -1.87
ITGB1-214ENST00000488427 LAMA1P25391 3075 aa3.37□□□□□ -1.87
ITGB1-214ENST00000488427 RP1L1Q8IWN7 2480 aaPredicted RBP3.36□□□□□ -1.87
ITGB1-214ENST00000488427 PTPRBP23467 1997 aa3.36□□□□□ -1.87
ITGB1-214ENST00000488427 C2orf16Q68DN1 1984 aa3.36□□□□□ -1.87
ITGB1-214ENST00000488427 SCN10AQ9Y5Y9 1956 aa3.36□□□□□ -1.87
ITGB1-214ENST00000488427 NBPF19A0A087WUL8 3843 aa3.36□□□□□ -1.87
ITGB1-214ENST00000488427 ATMQ13315 3056 aa3.36□□□□□ -1.87
ITGB1-214ENST00000488427 SIPA1L1O43166 1804 aa3.36□□□□□ -1.87
ITGB1-214ENST00000488427 PARP14Q460N5 1801 aa3.36□□□□□ -1.87
ITGB1-214ENST00000488427 A0A087WWV3 80 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms