RNA–Protein interactions for RNA: ENST00000488228.1

UBE4B-210, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-210ENST00000488228 ITCHQ96J02 903 aa10.16□□□□□ -0.78
UBE4B-210ENST00000488228 TAAR6Q96RI8 345 aa10.16□□□□□ -0.78
UBE4B-210ENST00000488228 ADOQ96SZ5 270 aa10.16□□□□□ -0.78
UBE4B-210ENST00000488228 ACTRT3Q9BYD9 372 aa10.16□□□□□ -0.78
UBE4B-210ENST00000488228 RMND5AQ9H871 391 aa10.16□□□□□ -0.78
UBE4B-210ENST00000488228 SH2D2AQ9NP31 389 aa10.16□□□□□ -0.78
UBE4B-210ENST00000488228 SLC52A3Q9NQ40 469 aa10.16□□□□□ -0.78
UBE4B-210ENST00000488228 FLRT3Q9NZU0 649 aa10.16□□□□□ -0.78
UBE4B-210ENST00000488228 CBLCQ9ULV8 474 aa10.16□□□□□ -0.78
UBE4B-210ENST00000488228 FAF1Q9UNN5 650 aaPredicted RBP10.16□□□□□ -0.78
UBE4B-210ENST00000488228 PCNX3Q9H6A9 2034 aa10.16□□□□□ -0.78
UBE4B-210ENST00000488228 DNAJC13O75165 2243 aa10.15□□□□□ -0.78
UBE4B-210ENST00000488228 TTLL8A6PVC2 850 aa10.15□□□□□ -0.78
UBE4B-210ENST00000488228 SUV39H1O43463 412 aa10.15□□□□□ -0.78
UBE4B-210ENST00000488228 TSPAN2O60636 221 aa10.15□□□□□ -0.78
UBE4B-210ENST00000488228 SHOX2O60902 331 aaPredicted RBP10.15□□□□□ -0.78
UBE4B-210ENST00000488228 ICOSLGO75144 302 aa10.15□□□□□ -0.78
UBE4B-210ENST00000488228 REM1O75628 298 aa10.15□□□□□ -0.78
UBE4B-210ENST00000488228 ANP32DO95626 131 aa10.15□□□□□ -0.78
UBE4B-210ENST00000488228 IGKV1D-16P01601 117 aa10.15□□□□□ -0.78
UBE4B-210ENST00000488228 HOXB9P17482 250 aaPredicted RBP10.15□□□□□ -0.78
UBE4B-210ENST00000488228 KRT20P35900 424 aa10.15□□□□□ -0.78
UBE4B-210ENST00000488228 DNASE1L1P49184 302 aa10.15□□□□□ -0.78
UBE4B-210ENST00000488228 MAN2A2P49641 1150 aa10.15□□□□□ -0.78
UBE4B-210ENST00000488228 KHKP50053 298 aa10.15□□□□□ -0.78
UBE4B-210ENST00000488228 MEOX1P50221 254 aa10.15□□□□□ -0.78
UBE4B-210ENST00000488228 IRX1P78414 480 aaPredicted RBP10.15□□□□□ -0.78
UBE4B-210ENST00000488228 MRPS22P82650 360 aaKnown RBP10.15□□□□□ -0.78
UBE4B-210ENST00000488228 LRRC74AQ0VAA2 488 aa10.15□□□□□ -0.78
UBE4B-210ENST00000488228 KLF10Q13118 480 aa10.15□□□□□ -0.78
UBE4B-210ENST00000488228 DECR1Q16698 335 aa10.15□□□□□ -0.78
UBE4B-210ENST00000488228 PAGE3Q5JUK9 113 aa10.15□□□□□ -0.78
UBE4B-210ENST00000488228 CCNJQ5T5M9 372 aa10.15□□□□□ -0.78
UBE4B-210ENST00000488228 CDC73Q6P1J9 531 aa10.15□□□□□ -0.78
UBE4B-210ENST00000488228 FIGNL1Q6PIW4 674 aa10.15□□□□□ -0.78
UBE4B-210ENST00000488228 ZNF621Q6ZSS3 439 aa10.15□□□□□ -0.78
UBE4B-210ENST00000488228 C6orf120Q7Z4R8 191 aa10.15□□□□□ -0.78
UBE4B-210ENST00000488228 PNPLA5Q7Z6Z6 429 aaPredicted RBP10.15□□□□□ -0.78
UBE4B-210ENST00000488228 ZAR1Q86SH2 424 aa10.15□□□□□ -0.78
UBE4B-210ENST00000488228 RETREG3Q86VR2 466 aa10.15□□□□□ -0.78
UBE4B-210ENST00000488228 SNX32Q86XE0 403 aa10.15□□□□□ -0.78
UBE4B-210ENST00000488228 RNF130Q86XS8 419 aa10.15□□□□□ -0.78
UBE4B-210ENST00000488228 SULF2Q8IWU5 870 aa10.15□□□□□ -0.78
UBE4B-210ENST00000488228 MSRB3Q8IXL7 192 aa10.15□□□□□ -0.78
UBE4B-210ENST00000488228 DND1Q8IYX4 353 aaKnown RBP10.15□□□□□ -0.78
UBE4B-210ENST00000488228 CISD2Q8N5K1 135 aaKnown RBP10.15□□□□□ -0.78
UBE4B-210ENST00000488228 SPPL2AQ8TCT8 520 aa10.15□□□□□ -0.78
UBE4B-210ENST00000488228 PAQR8Q8TEZ7 354 aa10.15□□□□□ -0.78
UBE4B-210ENST00000488228 GTF2H4Q92759 462 aa10.15□□□□□ -0.78
UBE4B-210ENST00000488228 DIO2Q92813 273 aa10.15□□□□□ -0.78
UBE4B-210ENST00000488228 RAB8BQ92930 207 aa10.15□□□□□ -0.78
UBE4B-210ENST00000488228 NEURL3Q96EH8 262 aa10.15□□□□□ -0.78
UBE4B-210ENST00000488228 SGCZQ96LD1 299 aa10.15□□□□□ -0.78
UBE4B-210ENST00000488228 FRMD6Q96NE9 622 aa10.15□□□□□ -0.78
UBE4B-210ENST00000488228 COL21A1Q96P44 957 aa10.15□□□□□ -0.78
UBE4B-210ENST00000488228 OR7D2Q96RA2 312 aa10.15□□□□□ -0.78
UBE4B-210ENST00000488228 NODALQ96S42 347 aa10.15□□□□□ -0.78
UBE4B-210ENST00000488228 PAIP1Q9H074 479 aaKnown RBP10.15□□□□□ -0.78
UBE4B-210ENST00000488228 TSPAN10Q9H1Z9 355 aaPredicted RBP10.15□□□□□ -0.78
UBE4B-210ENST00000488228 OR51I1Q9H343 314 aa10.15□□□□□ -0.78
UBE4B-210ENST00000488228 SACM1LQ9NTJ5 587 aa10.15□□□□□ -0.78
UBE4B-210ENST00000488228 TMEM45AQ9NWC5 275 aa10.15□□□□□ -0.78
UBE4B-210ENST00000488228 SLAMF8Q9P0V8 285 aa10.15□□□□□ -0.78
UBE4B-210ENST00000488228 CNOT11Q9UKZ1 510 aaKnown RBP10.15□□□□□ -0.78
UBE4B-210ENST00000488228 KLF13Q9Y2Y9 288 aaPredicted RBP10.15□□□□□ -0.78
UBE4B-210ENST00000488228 HRH3Q9Y5N1 445 aa10.15□□□□□ -0.78
UBE4B-210ENST00000488228 KCNE3Q9Y6H6 103 aa10.15□□□□□ -0.78
UBE4B-210ENST00000488228 CAPN7Q9Y6W3 813 aa10.15□□□□□ -0.78
UBE4B-210ENST00000488228 A0A096LPI6 279 aa10.14□□□□□ -0.79
UBE4B-210ENST00000488228 A0A1W2PP18 115 aa10.14□□□□□ -0.79
UBE4B-210ENST00000488228 PRAMEF25A6NGN4 478 aa10.14□□□□□ -0.79
UBE4B-210ENST00000488228 OR6C70A6NIJ9 312 aa10.14□□□□□ -0.79
UBE4B-210ENST00000488228 TTC36A6NLP5 189 aa10.14□□□□□ -0.79
UBE4B-210ENST00000488228 C17orf51A8MQB3 221 aa10.14□□□□□ -0.79
UBE4B-210ENST00000488228 CAPN14A8MX76 684 aa10.14□□□□□ -0.79
UBE4B-210ENST00000488228 B8ZZF3 427 aa10.14□□□□□ -0.79
UBE4B-210ENST00000488228 CDK2AP1O14519 115 aa10.14□□□□□ -0.79
UBE4B-210ENST00000488228 TP53I11O14683 189 aa10.14□□□□□ -0.79
UBE4B-210ENST00000488228 ANGPT2O15123 496 aa10.14□□□□□ -0.79
UBE4B-210ENST00000488228 SLC28A2O43868 658 aa10.14□□□□□ -0.79
UBE4B-210ENST00000488228 PEX1O43933 1283 aa10.14□□□□□ -0.79
UBE4B-210ENST00000488228 KCNH1O95259 989 aa10.14□□□□□ -0.79
UBE4B-210ENST00000488228 P04436 131 aa10.14□□□□□ -0.79
UBE4B-210ENST00000488228 KRT16P08779 473 aa10.14□□□□□ -0.79
UBE4B-210ENST00000488228 CYP4B1P13584 511 aa10.14□□□□□ -0.79
UBE4B-210ENST00000488228 MATN1P21941 496 aa10.14□□□□□ -0.79
UBE4B-210ENST00000488228 KCNJ2P63252 427 aa10.14□□□□□ -0.79
UBE4B-210ENST00000488228 POU6F2P78424 691 aaPredicted RBP10.14□□□□□ -0.79
UBE4B-210ENST00000488228 INPP5JQ15735 1006 aaPredicted RBP10.14□□□□□ -0.79
UBE4B-210ENST00000488228 INAQ16352 499 aa10.14□□□□□ -0.79
UBE4B-210ENST00000488228 CYP27C1Q4G0S4 372 aa10.14□□□□□ -0.79
UBE4B-210ENST00000488228 COX20Q5RI15 118 aa10.14□□□□□ -0.79
UBE4B-210ENST00000488228 DDX59Q5T1V6 619 aaKnown RBP eCLIP10.14□□□□□ -0.79
UBE4B-210ENST00000488228 SLC22A10Q63ZE4 541 aa10.14□□□□□ -0.79
UBE4B-210ENST00000488228 BHLHB9Q6PI77 547 aa10.14□□□□□ -0.79
UBE4B-210ENST00000488228 FAM180AQ6UWF9 173 aa10.14□□□□□ -0.79
UBE4B-210ENST00000488228 OLIG3Q7RTU3 272 aa10.14□□□□□ -0.79
UBE4B-210ENST00000488228 DHDDSQ86SQ9 333 aa10.14□□□□□ -0.79
UBE4B-210ENST00000488228 MTDHQ86UE4 582 aaKnown RBP10.14□□□□□ -0.79
UBE4B-210ENST00000488228 TRIML2Q8N7C3 387 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms