RNA–Protein interactions for RNA: ENST00000488111.1

COPS7B-221, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 1 (best)

Gene COPS7B, Length 2,381 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-221ENST00000488111 DPH7Q9BTV6 452 aa12.88□□□□□ -0.35
COPS7B-221ENST00000488111 CNPPD1Q9BV87 410 aa12.88□□□□□ -0.35
COPS7B-221ENST00000488111 ARRDC1-AS1Q9H2J1 176 aa12.88□□□□□ -0.35
COPS7B-221ENST00000488111 ACTR10Q9NZ32 417 aa12.88□□□□□ -0.35
COPS7B-221ENST00000488111 GMEB2Q9UKD1 530 aa12.88□□□□□ -0.35
COPS7B-221ENST00000488111 AUP1Q9Y679 476 aa12.88□□□□□ -0.35
COPS7B-221ENST00000488111 SPEGQ15772 3267 aa12.87□□□□□ -0.35
COPS7B-221ENST00000488111 A0A1B0GTQ1 180 aa12.87□□□□□ -0.35
COPS7B-221ENST00000488111 LINC00862A6NCI5 91 aa12.87□□□□□ -0.35
COPS7B-221ENST00000488111 GALR2O43603 387 aaPredicted RBP12.87□□□□□ -0.35
COPS7B-221ENST00000488111 ETHE1O95571 254 aa12.87□□□□□ -0.35
COPS7B-221ENST00000488111 EPHA8P29322 1005 aaPredicted RBP12.87□□□□□ -0.35
COPS7B-221ENST00000488111 CLDN8P56748 225 aa12.87□□□□□ -0.35
COPS7B-221ENST00000488111 CSNK1G2P78368 415 aa12.87□□□□□ -0.35
COPS7B-221ENST00000488111 MED22Q15528 200 aa12.87□□□□□ -0.35
COPS7B-221ENST00000488111 GPR19Q15760 415 aa12.87□□□□□ -0.35
COPS7B-221ENST00000488111 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.87□□□□□ -0.35
COPS7B-221ENST00000488111 SAXO2Q658L1 398 aa12.87□□□□□ -0.35
COPS7B-221ENST00000488111 TCEAL6Q6IPX3 200 aa12.87□□□□□ -0.35
COPS7B-221ENST00000488111 OGFOD3Q6PK18 319 aa12.87□□□□□ -0.35
COPS7B-221ENST00000488111 PAMR1Q6UXH9 720 aa12.87□□□□□ -0.35
COPS7B-221ENST00000488111 TMIGD1Q6UXZ0 262 aa12.87□□□□□ -0.35
COPS7B-221ENST00000488111 GDPGP1Q6ZNW5 385 aa12.87□□□□□ -0.35
COPS7B-221ENST00000488111 GALNT10Q86SR1 603 aa12.87□□□□□ -0.35
COPS7B-221ENST00000488111 GDPD1Q8N9F7 314 aa12.87□□□□□ -0.35
COPS7B-221ENST00000488111 B3GNT7Q8NFL0 401 aa12.87□□□□□ -0.35
COPS7B-221ENST00000488111 GPR156Q8NFN8 814 aa12.87□□□□□ -0.35
COPS7B-221ENST00000488111 NLGN4YQ8NFZ3 816 aaPredicted RBP12.87□□□□□ -0.35
COPS7B-221ENST00000488111 TCEAL3Q969E4 200 aa12.87□□□□□ -0.35
COPS7B-221ENST00000488111 MAGEB10Q96LZ2 347 aaPredicted RBP12.87□□□□□ -0.35
COPS7B-221ENST00000488111 OPALINQ96PE5 141 aa12.87□□□□□ -0.35
COPS7B-221ENST00000488111 SLC38A3Q99624 504 aa12.87□□□□□ -0.35
COPS7B-221ENST00000488111 CAPN10Q9HC96 672 aa12.87□□□□□ -0.35
COPS7B-221ENST00000488111 PCDHGB3Q9Y5G1 929 aa12.87□□□□□ -0.35
COPS7B-221ENST00000488111 TNRC6BQ9UPQ9 1833 aaKnown RBP12.87□□□□□ -0.35
COPS7B-221ENST00000488111 TMEM131Q92545 1883 aa12.87□□□□□ -0.35
COPS7B-221ENST00000488111 SNTNA6NMZ2 147 aa12.87□□□□□ -0.35
COPS7B-221ENST00000488111 PLA2G10O15496 165 aa12.87□□□□□ -0.35
COPS7B-221ENST00000488111 LCMT2O60294 686 aaKnown RBP12.87□□□□□ -0.35
COPS7B-221ENST00000488111 B3GALT4O96024 378 aa12.87□□□□□ -0.35
COPS7B-221ENST00000488111 TGFB1P01137 390 aa12.87□□□□□ -0.35
COPS7B-221ENST00000488111 STATHP02808 62 aa12.87□□□□□ -0.35
COPS7B-221ENST00000488111 IFI30P13284 250 aa12.87□□□□□ -0.35
COPS7B-221ENST00000488111 UGT2B7P16662 529 aa12.87□□□□□ -0.35
COPS7B-221ENST00000488111 CMPK1P30085 196 aa12.87□□□□□ -0.35
COPS7B-221ENST00000488111 PI4KAP42356 2102 aa12.87□□□□□ -0.35
COPS7B-221ENST00000488111 FASLGP48023 281 aa12.87□□□□□ -0.35
COPS7B-221ENST00000488111 RPS13P62277 151 aaKnown RBP12.87□□□□□ -0.35
COPS7B-221ENST00000488111 SNRPD2P62316 118 aaKnown RBP12.87□□□□□ -0.35
COPS7B-221ENST00000488111 DAB2P98082 770 aa12.87□□□□□ -0.35
COPS7B-221ENST00000488111 PCM1Q15154 2024 aa12.87□□□□□ -0.35
COPS7B-221ENST00000488111 C14orf28Q4W4Y0 310 aa12.87□□□□□ -0.35
COPS7B-221ENST00000488111 C6orf132Q5T0Z8 1188 aa12.87□□□□□ -0.35
COPS7B-221ENST00000488111 ANKRD46Q86W74 232 aa12.87□□□□□ -0.35
COPS7B-221ENST00000488111 SLC35F3Q8IY50 421 aa12.87□□□□□ -0.35
COPS7B-221ENST00000488111 FLVCR1-AS1Q8TAF5 88 aa12.87□□□□□ -0.35
COPS7B-221ENST00000488111 LRRC20Q8TCA0 184 aa12.87□□□□□ -0.35
COPS7B-221ENST00000488111 AIF1LQ9BQI0 150 aa12.87□□□□□ -0.35
COPS7B-221ENST00000488111 AIFM2Q9BRQ8 373 aa12.87□□□□□ -0.35
COPS7B-221ENST00000488111 COL25A1Q9BXS0 654 aaPredicted RBP12.87□□□□□ -0.35
COPS7B-221ENST00000488111 PELI2Q9HAT8 420 aa12.87□□□□□ -0.35
COPS7B-221ENST00000488111 HHATLQ9HCP6 504 aa12.87□□□□□ -0.35
COPS7B-221ENST00000488111 MS4A12Q9NXJ0 267 aa12.87□□□□□ -0.35
COPS7B-221ENST00000488111 GLTPQ9NZD2 209 aa12.87□□□□□ -0.35
COPS7B-221ENST00000488111 CNOT2Q9NZN8 540 aaKnown RBP12.87□□□□□ -0.35
COPS7B-221ENST00000488111 SLC6A14Q9UN76 642 aa12.87□□□□□ -0.35
COPS7B-221ENST00000488111 HCN4Q9Y3Q4 1203 aa12.87□□□□□ -0.35
COPS7B-221ENST00000488111 TRIM77I1YAP6 450 aa12.86□□□□□ -0.35
COPS7B-221ENST00000488111 OR1F1O43749 312 aa12.86□□□□□ -0.35
COPS7B-221ENST00000488111 PRAMEF10O60809 474 aa12.86□□□□□ -0.35
COPS7B-221ENST00000488111 PDE9AO76083 593 aa12.86□□□□□ -0.35
COPS7B-221ENST00000488111 KCNK5O95279 499 aa12.86□□□□□ -0.35
COPS7B-221ENST00000488111 PTGS2P35354 604 aa12.86□□□□□ -0.35
COPS7B-221ENST00000488111 IDH2P48735 452 aaKnown RBP12.86□□□□□ -0.35
COPS7B-221ENST00000488111 FAM131AQ6UXB0 335 aa12.86□□□□□ -0.35
COPS7B-221ENST00000488111 C17orf82Q86X59 251 aaPredicted RBP12.86□□□□□ -0.35
COPS7B-221ENST00000488111 PTOV1Q86YD1 416 aa12.86□□□□□ -0.35
COPS7B-221ENST00000488111 LAS2Q8IYD9 372 aa12.86□□□□□ -0.35
COPS7B-221ENST00000488111 KRT78Q8N1N4 520 aa12.86□□□□□ -0.35
COPS7B-221ENST00000488111 ANKRD53Q8N9V6 530 aa12.86□□□□□ -0.35
COPS7B-221ENST00000488111 OR4K1Q8NGD4 311 aa12.86□□□□□ -0.35
COPS7B-221ENST00000488111 CEP76Q8TAP6 659 aa12.86□□□□□ -0.35
COPS7B-221ENST00000488111 TRMT61AQ96FX7 289 aaKnown RBP12.86□□□□□ -0.35
COPS7B-221ENST00000488111 APIPQ96GX9 242 aa12.86□□□□□ -0.35
COPS7B-221ENST00000488111 TMEM80Q96HE8 168 aa12.86□□□□□ -0.35
COPS7B-221ENST00000488111 HDHD5Q9BXW7 423 aa12.86□□□□□ -0.35
COPS7B-221ENST00000488111 MIXL1Q9H2W2 232 aa12.86□□□□□ -0.35
COPS7B-221ENST00000488111 LRIT1Q9P2V4 623 aa12.86□□□□□ -0.35
COPS7B-221ENST00000488111 MAPRE3Q9UPY8 281 aa12.86□□□□□ -0.35
COPS7B-221ENST00000488111 ALG5Q9Y673 324 aa12.86□□□□□ -0.35
COPS7B-221ENST00000488111 CSNK1G3Q9Y6M4 447 aa12.86□□□□□ -0.35
COPS7B-221ENST00000488111 RNF215Q9Y6U7 377 aa12.86□□□□□ -0.35
COPS7B-221ENST00000488111 CABIN1Q9Y6J0 2220 aa12.86□□□□□ -0.35
COPS7B-221ENST00000488111 CACNA1EQ15878 2313 aa12.86□□□□□ -0.35
COPS7B-221ENST00000488111 SAP18O00422 153 aaKnown RBP12.86□□□□□ -0.35
COPS7B-221ENST00000488111 CASC3O15234 703 aaKnown RBP12.86□□□□□ -0.35
COPS7B-221ENST00000488111 UBXN7O94888 489 aa12.86□□□□□ -0.35
COPS7B-221ENST00000488111 SCG5P05408 212 aa12.86□□□□□ -0.35
COPS7B-221ENST00000488111 PVRP15151 417 aa12.86□□□□□ -0.35
COPS7B-221ENST00000488111 AMD1P17707 334 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms