RNA–Protein interactions for RNA: ENST00000488087.1

ECHDC1-217, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 3

Gene ECHDC1, Length 473 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-217ENST00000488087 RPLP0P05388 317 aaKnown RBP3.25□□□□□ -1.89
ECHDC1-217ENST00000488087 GIFP27352 417 aa3.25□□□□□ -1.89
ECHDC1-217ENST00000488087 PHBP35232 272 aa3.25□□□□□ -1.89
ECHDC1-217ENST00000488087 LONP1P36776 959 aaKnown RBP3.25□□□□□ -1.89
ECHDC1-217ENST00000488087 SLC1A3P43003 542 aa3.25□□□□□ -1.89
ECHDC1-217ENST00000488087 IFNAR2P48551 515 aa3.25□□□□□ -1.89
ECHDC1-217ENST00000488087 SERPINH1P50454 418 aaKnown RBP3.25□□□□□ -1.89
ECHDC1-217ENST00000488087 BCAP31P51572 246 aa3.25□□□□□ -1.89
ECHDC1-217ENST00000488087 RAP1GDS1P52306 607 aa3.25□□□□□ -1.89
ECHDC1-217ENST00000488087 NUP107P57740 925 aa3.25□□□□□ -1.89
ECHDC1-217ENST00000488087 SLC26A5P58743 744 aa3.25□□□□□ -1.89
ECHDC1-217ENST00000488087 ASPHQ12797 758 aa3.25□□□□□ -1.89
ECHDC1-217ENST00000488087 COX10Q12887 443 aa3.25□□□□□ -1.89
ECHDC1-217ENST00000488087 CALCOCO2Q13137 446 aa3.25□□□□□ -1.89
ECHDC1-217ENST00000488087 PNOCQ13519 176 aa3.25□□□□□ -1.89
ECHDC1-217ENST00000488087 RPS6KA1Q15418 735 aa3.25□□□□□ -1.89
ECHDC1-217ENST00000488087 TGFBIQ15582 683 aa3.25□□□□□ -1.89
ECHDC1-217ENST00000488087 MAPK11Q15759 364 aa3.25□□□□□ -1.89
ECHDC1-217ENST00000488087 ZNF829Q3KNS6 432 aaPredicted RBP3.25□□□□□ -1.89
ECHDC1-217ENST00000488087 LRRC37A5PQ49AS3 106 aa3.25□□□□□ -1.89
ECHDC1-217ENST00000488087 AARDQ4LEZ3 155 aa3.25□□□□□ -1.89
ECHDC1-217ENST00000488087 IFI44LQ53G44 452 aa3.25□□□□□ -1.89
ECHDC1-217ENST00000488087 TAF1BQ53T94 588 aaPredicted RBP3.25□□□□□ -1.89
ECHDC1-217ENST00000488087 SLX4IPQ5VYV7 408 aa3.25□□□□□ -1.89
ECHDC1-217ENST00000488087 METTL21CQ5VZV1 264 aa3.25□□□□□ -1.89
ECHDC1-217ENST00000488087 KCTD11Q693B1 232 aa3.25□□□□□ -1.89
ECHDC1-217ENST00000488087 TWF2Q6IBS0 349 aaKnown RBP3.25□□□□□ -1.89
ECHDC1-217ENST00000488087 TCEAL6Q6IPX3 200 aa3.25□□□□□ -1.89
ECHDC1-217ENST00000488087 SPOPLQ6IQ16 392 aa3.25□□□□□ -1.89
ECHDC1-217ENST00000488087 LRRC8BQ6P9F7 803 aa3.25□□□□□ -1.89
ECHDC1-217ENST00000488087 WDR59Q6PJI9 974 aa3.25□□□□□ -1.89
ECHDC1-217ENST00000488087 METTL7BQ6UX53 244 aa3.25□□□□□ -1.89
ECHDC1-217ENST00000488087 LINC00299Q6ZSB3 139 aa3.25□□□□□ -1.89
ECHDC1-217ENST00000488087 TRMT11Q7Z4G4 463 aaKnown RBP3.25□□□□□ -1.89
ECHDC1-217ENST00000488087 SLC51BQ86UW2 128 aa3.25□□□□□ -1.89
ECHDC1-217ENST00000488087 ZNF440Q8IYI8 595 aa3.25□□□□□ -1.89
ECHDC1-217ENST00000488087 RIBC1Q8N443 379 aaPredicted RBP3.25□□□□□ -1.89
ECHDC1-217ENST00000488087 CHPT1Q8WUD6 406 aa3.25□□□□□ -1.89
ECHDC1-217ENST00000488087 RASSF5Q8WWW0 418 aa3.25□□□□□ -1.89
ECHDC1-217ENST00000488087 BCL2L2Q92843 193 aaPredicted RBP3.25□□□□□ -1.89
ECHDC1-217ENST00000488087 BORCS5Q969J3 196 aa3.25□□□□□ -1.89
ECHDC1-217ENST00000488087 CAPZA3Q96KX2 299 aa3.25□□□□□ -1.89
ECHDC1-217ENST00000488087 LURAP1Q96LR2 239 aa3.25□□□□□ -1.89
ECHDC1-217ENST00000488087 AGAP4Q96P64 663 aa3.25□□□□□ -1.89
ECHDC1-217ENST00000488087 ECSITQ9BQ95 431 aa3.25□□□□□ -1.89
ECHDC1-217ENST00000488087 ZNF559Q9BR84 538 aa3.25□□□□□ -1.89
ECHDC1-217ENST00000488087 TBC1D10AQ9BXI6 508 aa3.25□□□□□ -1.89
ECHDC1-217ENST00000488087 MRPS26Q9BYN8 205 aaKnown RBP3.25□□□□□ -1.89
ECHDC1-217ENST00000488087 LRRC2Q9BYS8 371 aa3.25□□□□□ -1.89
ECHDC1-217ENST00000488087 SLC7A5P2Q9GIP4 190 aa3.25□□□□□ -1.89
ECHDC1-217ENST00000488087 EGLN1Q9GZT9 426 aa3.25□□□□□ -1.89
ECHDC1-217ENST00000488087 C5orf66Q9H5L9 145 aa3.25□□□□□ -1.89
ECHDC1-217ENST00000488087 MRPL17Q9NRX2 175 aaKnown RBP3.25□□□□□ -1.89
ECHDC1-217ENST00000488087 PNPLA3Q9NST1 481 aa3.25□□□□□ -1.89
ECHDC1-217ENST00000488087 GID8Q9NWU2 228 aa3.25□□□□□ -1.89
ECHDC1-217ENST00000488087 NDE1Q9NXR1 346 aa3.25□□□□□ -1.89
ECHDC1-217ENST00000488087 DBF4Q9UBU7 674 aaPredicted RBP3.25□□□□□ -1.89
ECHDC1-217ENST00000488087 RWDD2AQ9UIY3 292 aa3.25□□□□□ -1.89
ECHDC1-217ENST00000488087 GNPTGQ9UJJ9 305 aa3.25□□□□□ -1.89
ECHDC1-217ENST00000488087 DNAJC12Q9UKB3 198 aa3.25□□□□□ -1.89
ECHDC1-217ENST00000488087 HEY1Q9Y5J3 304 aa3.25□□□□□ -1.89
ECHDC1-217ENST00000488087 TEX264Q9Y6I9 313 aa3.25□□□□□ -1.89
ECHDC1-217ENST00000488087 USH1CQ9Y6N9 552 aa3.25□□□□□ -1.89
ECHDC1-217ENST00000488087 MROH1Q8NDA8 1641 aa3.25□□□□□ -1.89
ECHDC1-217ENST00000488087 DISP2A7MBM2 1401 aa3.25□□□□□ -1.89
ECHDC1-217ENST00000488087 CPS1P31327 1500 aa3.24□□□□□ -1.89
ECHDC1-217ENST00000488087 ARHGAP5Q13017 1502 aa3.24□□□□□ -1.89
ECHDC1-217ENST00000488087 GAKO14976 1311 aa3.24□□□□□ -1.89
ECHDC1-217ENST00000488087 ABCB11O95342 1321 aa3.24□□□□□ -1.89
ECHDC1-217ENST00000488087 FRMPD4Q14CM0 1322 aa3.24□□□□□ -1.89
ECHDC1-217ENST00000488087 ZNF532Q9HCE3 1301 aa3.24□□□□□ -1.89
ECHDC1-217ENST00000488087 MROH2AA6NES4 1674 aa3.24□□□□□ -1.89
ECHDC1-217ENST00000488087 KIF20BQ96Q89 1820 aa3.24□□□□□ -1.89
ECHDC1-217ENST00000488087 WNK3Q9BYP7 1800 aa3.24□□□□□ -1.89
ECHDC1-217ENST00000488087 CACNA1FO60840 1977 aa3.24□□□□□ -1.89
ECHDC1-217ENST00000488087 LOC105371242A0A075B767 164 aa3.24□□□□□ -1.89
ECHDC1-217ENST00000488087 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP3.24□□□□□ -1.89
ECHDC1-217ENST00000488087 TTC26A0AVF1 554 aa3.24□□□□□ -1.89
ECHDC1-217ENST00000488087 TCP10L2B9ZVM9 353 aa3.24□□□□□ -1.89
ECHDC1-217ENST00000488087 E9PQ18 207 aa3.24□□□□□ -1.89
ECHDC1-217ENST00000488087 NPIPB9F8W1W9 429 aa3.24□□□□□ -1.89
ECHDC1-217ENST00000488087 H0YC42 278 aa3.24□□□□□ -1.89
ECHDC1-217ENST00000488087 BOLA2-SMG1P6H3BVE0 249 aa3.24□□□□□ -1.89
ECHDC1-217ENST00000488087 TFECO14948 347 aaPredicted RBP3.24□□□□□ -1.89
ECHDC1-217ENST00000488087 MAPK13O15264 365 aa3.24□□□□□ -1.89
ECHDC1-217ENST00000488087 DENRO43583 198 aaKnown RBP3.24□□□□□ -1.89
ECHDC1-217ENST00000488087 ACSL4O60488 711 aa3.24□□□□□ -1.89
ECHDC1-217ENST00000488087 CCDC22O60826 627 aa3.24□□□□□ -1.89
ECHDC1-217ENST00000488087 FKBP6O75344 327 aa3.24□□□□□ -1.89
ECHDC1-217ENST00000488087 FGFR1OPO95684 399 aaKnown RBP3.24□□□□□ -1.89
ECHDC1-217ENST00000488087 TBX6O95947 436 aaPredicted RBP3.24□□□□□ -1.89
ECHDC1-217ENST00000488087 GAS8O95995 478 aa3.24□□□□□ -1.89
ECHDC1-217ENST00000488087 SBK2P0C263 348 aa3.24□□□□□ -1.89
ECHDC1-217ENST00000488087 CTRB1P17538 263 aa3.24□□□□□ -1.89
ECHDC1-217ENST00000488087 AOC1P19801 751 aa3.24□□□□□ -1.89
ECHDC1-217ENST00000488087 CCNA2P20248 432 aa3.24□□□□□ -1.89
ECHDC1-217ENST00000488087 C4BPBP20851 252 aa3.24□□□□□ -1.89
ECHDC1-217ENST00000488087 ANXA13P27216 316 aa3.24□□□□□ -1.89
ECHDC1-217ENST00000488087 NUDT1P36639 197 aa3.24□□□□□ -1.89
ECHDC1-217ENST00000488087 PPP1R2P41236 205 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms