RNA–Protein interactions for RNA: ENST00000487698.5

SF3B1-211, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 2,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-211ENST00000487698 C1orf189Q5VU69 101 aa8.78□□□□□ -1
SF3B1-211ENST00000487698 LAIR1Q6GTX8 287 aa8.78□□□□□ -1
SF3B1-211ENST00000487698 PWWP2BQ6NUJ5 590 aa8.78□□□□□ -1
SF3B1-211ENST00000487698 PRR23CQ6ZRP0 262 aa8.78□□□□□ -1
SF3B1-211ENST00000487698 VRK2Q86Y07 508 aa8.78□□□□□ -1
SF3B1-211ENST00000487698 ZNF615Q8N8J6 731 aa8.78□□□□□ -1
SF3B1-211ENST00000487698 PTPMT1Q8WUK0 201 aaPredicted RBP8.78□□□□□ -1
SF3B1-211ENST00000487698 PMM1Q92871 262 aa8.78□□□□□ -1
SF3B1-211ENST00000487698 TSLPQ969D9 159 aa8.78□□□□□ -1
SF3B1-211ENST00000487698 ARHGDIGQ99819 225 aa8.78□□□□□ -1
SF3B1-211ENST00000487698 TGIF2Q9GZN2 237 aa8.78□□□□□ -1
SF3B1-211ENST00000487698 MTHFD2LQ9H903 347 aaPredicted RBP8.78□□□□□ -1
SF3B1-211ENST00000487698 POLE3Q9NRF9 147 aa8.78□□□□□ -1
SF3B1-211ENST00000487698 C3orf18Q9UK00 162 aa8.78□□□□□ -1
SF3B1-211ENST00000487698 RARRES3Q9UL19 164 aa8.78□□□□□ -1
SF3B1-211ENST00000487698 MKLN1Q9UL63 735 aa8.78□□□□□ -1
SF3B1-211ENST00000487698 ERVK-19Q9WJR5 959 aa8.78□□□□□ -1
SF3B1-211ENST00000487698 DTX4Q9Y2E6 619 aa8.78□□□□□ -1
SF3B1-211ENST00000487698 SLC9A8Q9Y2E8 581 aa8.78□□□□□ -1
SF3B1-211ENST00000487698 FAM32AQ9Y421 112 aaKnown RBP8.78□□□□□ -1
SF3B1-211ENST00000487698 CENPVL1A0A0U1RR11 272 aa8.77□□□□□ -1.01
SF3B1-211ENST00000487698 GXYLT2A0PJZ3 443 aa8.77□□□□□ -1.01
SF3B1-211ENST00000487698 FAM86C2PA6NEL3 165 aa8.77□□□□□ -1.01
SF3B1-211ENST00000487698 AGAP5A6NIR3 686 aa8.77□□□□□ -1.01
SF3B1-211ENST00000487698 M0R3H8 397 aa8.77□□□□□ -1.01
SF3B1-211ENST00000487698 BRINP1O60477 761 aa8.77□□□□□ -1.01
SF3B1-211ENST00000487698 MITFO75030 526 aaPredicted RBP8.77□□□□□ -1.01
SF3B1-211ENST00000487698 STX11O75558 287 aa8.77□□□□□ -1.01
SF3B1-211ENST00000487698 LDOC1O95751 146 aaPredicted RBP8.77□□□□□ -1.01
SF3B1-211ENST00000487698 CLIC3O95833 236 aa8.77□□□□□ -1.01
SF3B1-211ENST00000487698 ONECUT2O95948 504 aa8.77□□□□□ -1.01
SF3B1-211ENST00000487698 PIGAP37287 484 aa8.77□□□□□ -1.01
SF3B1-211ENST00000487698 NUBP1P53384 320 aa8.77□□□□□ -1.01
SF3B1-211ENST00000487698 RAD23AP54725 363 aa8.77□□□□□ -1.01
SF3B1-211ENST00000487698 POU6F2P78424 691 aaPredicted RBP8.77□□□□□ -1.01
SF3B1-211ENST00000487698 KCNAB2Q13303 367 aa8.77□□□□□ -1.01
SF3B1-211ENST00000487698 GANABQ14697 944 aaKnown RBP8.77□□□□□ -1.01
SF3B1-211ENST00000487698 NPTX1Q15818 432 aa8.77□□□□□ -1.01
SF3B1-211ENST00000487698 VWA2Q5GFL6 755 aa8.77□□□□□ -1.01
SF3B1-211ENST00000487698 PHF19Q5T6S3 580 aa8.77□□□□□ -1.01
SF3B1-211ENST00000487698 ZNF385CQ66K41 422 aaPredicted RBP8.77□□□□□ -1.01
SF3B1-211ENST00000487698 NPSR1Q6W5P4 371 aa8.77□□□□□ -1.01
SF3B1-211ENST00000487698 B3GNT8Q7Z7M8 397 aa8.77□□□□□ -1.01
SF3B1-211ENST00000487698 TSPYL5Q86VY4 417 aaPredicted RBP8.77□□□□□ -1.01
SF3B1-211ENST00000487698 ZNF619Q8N2I2 560 aa8.77□□□□□ -1.01
SF3B1-211ENST00000487698 BMPERQ8N8U9 685 aa8.77□□□□□ -1.01
SF3B1-211ENST00000487698 C7orf57Q8NEG2 295 aa8.77□□□□□ -1.01
SF3B1-211ENST00000487698 OR6T1Q8NGN1 323 aa8.77□□□□□ -1.01
SF3B1-211ENST00000487698 OR52P1PQ8NH57 321 aa8.77□□□□□ -1.01
SF3B1-211ENST00000487698 VANGL1Q8TAA9 524 aaPredicted RBP8.77□□□□□ -1.01
SF3B1-211ENST00000487698 GPR151Q8TDV0 419 aa8.77□□□□□ -1.01
SF3B1-211ENST00000487698 PHF10Q8WUB8 498 aaKnown RBP8.77□□□□□ -1.01
SF3B1-211ENST00000487698 CNPPD1Q9BV87 410 aa8.77□□□□□ -1.01
SF3B1-211ENST00000487698 YIPF2Q9BWQ6 316 aa8.77□□□□□ -1.01
SF3B1-211ENST00000487698 ZNF696Q9H7X3 374 aa8.77□□□□□ -1.01
SF3B1-211ENST00000487698 PNPLA3Q9NST1 481 aa8.77□□□□□ -1.01
SF3B1-211ENST00000487698 FBXO34Q9NWN3 711 aa8.77□□□□□ -1.01
SF3B1-211ENST00000487698 FAM118AQ9NWS6 357 aa8.77□□□□□ -1.01
SF3B1-211ENST00000487698 CTSFQ9UBX1 484 aa8.77□□□□□ -1.01
SF3B1-211ENST00000487698 A4GNTQ9UNA3 340 aa8.77□□□□□ -1.01
SF3B1-211ENST00000487698 ZNF443Q9Y2A4 671 aaPredicted RBP8.77□□□□□ -1.01
SF3B1-211ENST00000487698 ARRDC5A6NEK1 342 aa8.77□□□□□ -1.01
SF3B1-211ENST00000487698 C17orf105B2RV13 164 aa8.77□□□□□ -1.01
SF3B1-211ENST00000487698 E9PQ18 207 aa8.77□□□□□ -1.01
SF3B1-211ENST00000487698 SCRG1O75711 98 aa8.77□□□□□ -1.01
SF3B1-211ENST00000487698 KCNK2O95069 426 aa8.77□□□□□ -1.01
SF3B1-211ENST00000487698 GADD45GO95257 159 aa8.77□□□□□ -1.01
SF3B1-211ENST00000487698 TNFAIP8O95379 198 aa8.77□□□□□ -1.01
SF3B1-211ENST00000487698 IFNA16P05015 189 aa8.77□□□□□ -1.01
SF3B1-211ENST00000487698 THBS1P07996 1170 aa8.77□□□□□ -1.01
SF3B1-211ENST00000487698 ITGAMP11215 1152 aa8.77□□□□□ -1.01
SF3B1-211ENST00000487698 FGF5P12034 268 aa8.77□□□□□ -1.01
SF3B1-211ENST00000487698 GABRA3P34903 492 aa8.77□□□□□ -1.01
SF3B1-211ENST00000487698 ELAVL1Q15717 326 aaKnown RBP8.77□□□□□ -1.01
SF3B1-211ENST00000487698 MICAQ29983 383 aa8.77□□□□□ -1.01
SF3B1-211ENST00000487698 MINDY4Q4G0A6 757 aa8.77□□□□□ -1.01
SF3B1-211ENST00000487698 COLEC12Q5KU26 742 aa8.77□□□□□ -1.01
SF3B1-211ENST00000487698 ZNF770Q6IQ21 691 aaPredicted RBP8.77□□□□□ -1.01
SF3B1-211ENST00000487698 TMEM154Q6P9G4 183 aa8.77□□□□□ -1.01
SF3B1-211ENST00000487698 DEF8Q6ZN54 512 aa8.77□□□□□ -1.01
SF3B1-211ENST00000487698 BPHLQ86WA6 291 aaPredicted RBP8.77□□□□□ -1.01
SF3B1-211ENST00000487698 PIK3C3Q8NEB9 887 aa8.77□□□□□ -1.01
SF3B1-211ENST00000487698 OR7G1Q8NGA0 311 aa8.77□□□□□ -1.01
SF3B1-211ENST00000487698 OR10G2Q8NGC3 310 aa8.77□□□□□ -1.01
SF3B1-211ENST00000487698 OR52J3Q8NH60 311 aa8.77□□□□□ -1.01
SF3B1-211ENST00000487698 C16orf52Q8NHV5 167 aa8.77□□□□□ -1.01
SF3B1-211ENST00000487698 GIPC3Q8TF64 312 aa8.77□□□□□ -1.01
SF3B1-211ENST00000487698 FKBP10Q96AY3 582 aa8.77□□□□□ -1.01
SF3B1-211ENST00000487698 FUZQ9BT04 418 aa8.77□□□□□ -1.01
SF3B1-211ENST00000487698 VN1R1Q9GZP7 353 aa8.77□□□□□ -1.01
SF3B1-211ENST00000487698 OR10A5Q9H207 317 aa8.77□□□□□ -1.01
SF3B1-211ENST00000487698 NMNAT1Q9HAN9 279 aaPredicted RBP8.77□□□□□ -1.01
SF3B1-211ENST00000487698 OCIAD1Q9NX40 245 aa8.77□□□□□ -1.01
SF3B1-211ENST00000487698 RHCGQ9UBD6 479 aa8.77□□□□□ -1.01
SF3B1-211ENST00000487698 SCOCQ9UIL1 159 aa8.77□□□□□ -1.01
SF3B1-211ENST00000487698 KCNE5Q9UJ90 142 aa8.77□□□□□ -1.01
SF3B1-211ENST00000487698 GPR55Q9Y2T6 319 aaPredicted RBP8.77□□□□□ -1.01
SF3B1-211ENST00000487698 IFT52Q9Y366 437 aa8.77□□□□□ -1.01
SF3B1-211ENST00000487698 OTOGLQ3ZCN5 2332 aa8.76□□□□□ -1.01
SF3B1-211ENST00000487698 TTC36A6NLP5 189 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms