RNA–Protein interactions for RNA: ENST00000487615.5

TRA2B-214, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 4,485 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-214ENST00000487615 TANKQ92844 425 aa11.12□□□□□ -0.63
TRA2B-214ENST00000487615 SLC25A36Q96CQ1 311 aa11.12□□□□□ -0.63
TRA2B-214ENST00000487615 TGM7Q96PF1 710 aa11.12□□□□□ -0.63
TRA2B-214ENST00000487615 GFM1Q96RP9 751 aaKnown RBP11.12□□□□□ -0.63
TRA2B-214ENST00000487615 TAPBPLQ9BX59 468 aa11.12□□□□□ -0.63
TRA2B-214ENST00000487615 LGR4Q9BXB1 951 aa11.12□□□□□ -0.63
TRA2B-214ENST00000487615 TPSD1Q9BZJ3 242 aa11.12□□□□□ -0.63
TRA2B-214ENST00000487615 TMEM168Q9H0V1 697 aa11.12□□□□□ -0.63
TRA2B-214ENST00000487615 NDRG4Q9ULP0 352 aaKnown RBP11.12□□□□□ -0.63
TRA2B-214ENST00000487615 SLC7A7Q9UM01 511 aa11.12□□□□□ -0.63
TRA2B-214ENST00000487615 RBMX2Q9Y388 322 aaKnown RBP11.12□□□□□ -0.63
TRA2B-214ENST00000487615 RFXAPO00287 272 aa11.11□□□□□ -0.63
TRA2B-214ENST00000487615 PDCD5O14737 125 aa11.11□□□□□ -0.63
TRA2B-214ENST00000487615 LDB3O75112 727 aa11.11□□□□□ -0.63
TRA2B-214ENST00000487615 GABARAPO95166 117 aa11.11□□□□□ -0.63
TRA2B-214ENST00000487615 EDNRAP25101 427 aa11.11□□□□□ -0.63
TRA2B-214ENST00000487615 CA5AP35218 305 aa11.11□□□□□ -0.63
TRA2B-214ENST00000487615 ARRB1P49407 418 aaPredicted RBP11.11□□□□□ -0.63
TRA2B-214ENST00000487615 GPR143P51810 404 aa11.11□□□□□ -0.63
TRA2B-214ENST00000487615 HOXC5Q00444 222 aa11.11□□□□□ -0.63
TRA2B-214ENST00000487615 ZNF91Q05481 1191 aa11.11□□□□□ -0.63
TRA2B-214ENST00000487615 SLC14A1Q13336 389 aa11.11□□□□□ -0.63
TRA2B-214ENST00000487615 ANKDD1AQ495B1 522 aa11.11□□□□□ -0.63
TRA2B-214ENST00000487615 SYT6Q5T7P8 510 aaPredicted RBP11.11□□□□□ -0.63
TRA2B-214ENST00000487615 C18orf63Q68DL7 685 aa11.11□□□□□ -0.63
TRA2B-214ENST00000487615 FAAH2Q6GMR7 532 aa11.11□□□□□ -0.63
TRA2B-214ENST00000487615 PARM1Q6UWI2 310 aa11.11□□□□□ -0.63
TRA2B-214ENST00000487615 PLEKHG7Q6ZR37 379 aa11.11□□□□□ -0.63
TRA2B-214ENST00000487615 SHFQ7M4L6 423 aa11.11□□□□□ -0.63
TRA2B-214ENST00000487615 VRK2Q86Y07 508 aa11.11□□□□□ -0.63
TRA2B-214ENST00000487615 VWA5B2Q8N398 1253 aa11.11□□□□□ -0.63
TRA2B-214ENST00000487615 ZFP41Q8N8Y5 198 aa11.11□□□□□ -0.63
TRA2B-214ENST00000487615 UBE2FQ969M7 185 aa11.11□□□□□ -0.63
TRA2B-214ENST00000487615 ZNF559Q9BR84 538 aa11.11□□□□□ -0.63
TRA2B-214ENST00000487615 BTBD2Q9BX70 525 aa11.11□□□□□ -0.63
TRA2B-214ENST00000487615 FGF22Q9HCT0 170 aa11.11□□□□□ -0.63
TRA2B-214ENST00000487615 GPN3Q9UHW5 284 aaPredicted RBP11.11□□□□□ -0.63
TRA2B-214ENST00000487615 ATG4BQ9Y4P1 393 aa11.11□□□□□ -0.63
TRA2B-214ENST00000487615 PDCD11Q14690 1871 aaKnown RBP11.11□□□□□ -0.63
TRA2B-214ENST00000487615 LRIT2A6NDA9 550 aa11.11□□□□□ -0.63
TRA2B-214ENST00000487615 PRKRAO75569 313 aaKnown RBP11.11□□□□□ -0.63
TRA2B-214ENST00000487615 PPM1BO75688 479 aa11.11□□□□□ -0.63
TRA2B-214ENST00000487615 YPEL5P62699 121 aa11.11□□□□□ -0.63
TRA2B-214ENST00000487615 ALG10BQ5I7T1 473 aa11.11□□□□□ -0.63
TRA2B-214ENST00000487615 GPALPP1Q8IXQ4 340 aa11.11□□□□□ -0.63
TRA2B-214ENST00000487615 NLGN4XQ8N0W4 816 aa11.11□□□□□ -0.63
TRA2B-214ENST00000487615 MMP21Q8N119 569 aa11.11□□□□□ -0.63
TRA2B-214ENST00000487615 ZNF619Q8N2I2 560 aa11.11□□□□□ -0.63
TRA2B-214ENST00000487615 ADAMTS18Q8TE60 1221 aa11.11□□□□□ -0.63
TRA2B-214ENST00000487615 C16orf58Q96GQ5 468 aa11.11□□□□□ -0.63
TRA2B-214ENST00000487615 SAMD8Q96LT4 415 aa11.11□□□□□ -0.63
TRA2B-214ENST00000487615 CDADC1Q9BWV3 514 aa11.11□□□□□ -0.63
TRA2B-214ENST00000487615 SAP130Q9H0E3 1048 aa11.11□□□□□ -0.63
TRA2B-214ENST00000487615 ABCG4Q9H172 646 aa11.11□□□□□ -0.63
TRA2B-214ENST00000487615 MOV10Q9HCE1 1003 aaKnown RBP11.11□□□□□ -0.63
TRA2B-214ENST00000487615 RPRD1BQ9NQG5 326 aaKnown RBP11.11□□□□□ -0.63
TRA2B-214ENST00000487615 C14orf119Q9NWQ9 140 aa11.11□□□□□ -0.63
TRA2B-214ENST00000487615 SERTAD3Q9UJW9 196 aa11.11□□□□□ -0.63
TRA2B-214ENST00000487615 PLEKHM1Q9Y4G2 1056 aa11.11□□□□□ -0.63
TRA2B-214ENST00000487615 ADORA3P0DMS8 318 aa11.11□□□□□ -0.63
TRA2B-214ENST00000487615 SOX3P41225 446 aa11.11□□□□□ -0.63
TRA2B-214ENST00000487615 CDKN3Q16667 212 aa11.11□□□□□ -0.63
TRA2B-214ENST00000487615 PLBD1Q6P4A8 553 aa11.11□□□□□ -0.63
TRA2B-214ENST00000487615 NUP54Q7Z3B4 507 aa11.11□□□□□ -0.63
TRA2B-214ENST00000487615 MEX3DQ86XN8 651 aaKnown RBP11.11□□□□□ -0.63
TRA2B-214ENST00000487615 KLBQ86Z14 1044 aa11.11□□□□□ -0.63
TRA2B-214ENST00000487615 GATSQ8NAP1 163 aa11.11□□□□□ -0.63
TRA2B-214ENST00000487615 C1GALT1Q9NS00 363 aa11.11□□□□□ -0.63
TRA2B-214ENST00000487615 POT1Q9NUX5 634 aa11.11□□□□□ -0.63
TRA2B-214ENST00000487615 GPC6Q9Y625 555 aaPredicted RBP11.11□□□□□ -0.63
TRA2B-214ENST00000487615 ZNF638Q14966 1978 aaKnown RBP11.11□□□□□ -0.63
TRA2B-214ENST00000487615 ZNF236Q9UL36 1845 aa11.11□□□□□ -0.63
TRA2B-214ENST00000487615 UBE2QL1A1L167 161 aa11.11□□□□□ -0.63
TRA2B-214ENST00000487615 H3BQ06 376 aaPredicted RBP11.11□□□□□ -0.63
TRA2B-214ENST00000487615 PLD2O14939 933 aa11.11□□□□□ -0.63
TRA2B-214ENST00000487615 RDH16O75452 317 aa11.11□□□□□ -0.63
TRA2B-214ENST00000487615 CISD3P0C7P0 127 aa11.11□□□□□ -0.63
TRA2B-214ENST00000487615 CPMP14384 443 aa11.11□□□□□ -0.63
TRA2B-214ENST00000487615 CTHP32929 405 aa11.11□□□□□ -0.63
TRA2B-214ENST00000487615 ATP12AP54707 1039 aa11.11□□□□□ -0.63
TRA2B-214ENST00000487615 ACTC1P68032 377 aa11.11□□□□□ -0.63
TRA2B-214ENST00000487615 ACTA1P68133 377 aa11.11□□□□□ -0.63
TRA2B-214ENST00000487615 ILKQ13418 452 aa11.11□□□□□ -0.63
TRA2B-214ENST00000487615 ADAM15Q13444 863 aa11.11□□□□□ -0.63
TRA2B-214ENST00000487615 SP140LQ9H930 580 aa11.11□□□□□ -0.63
TRA2B-214ENST00000487615 PCDHGA6Q9Y5G7 932 aa11.11□□□□□ -0.63
TRA2B-214ENST00000487615 GXYLT2A0PJZ3 443 aa11.1□□□□□ -0.63
TRA2B-214ENST00000487615 ANXA2P2A6NMY6 339 aa11.1□□□□□ -0.63
TRA2B-214ENST00000487615 ZNF879B4DU55 563 aa11.1□□□□□ -0.63
TRA2B-214ENST00000487615 FAM227AF5H4B4 570 aa11.1□□□□□ -0.63
TRA2B-214ENST00000487615 TMPRSS11DO60235 418 aa11.1□□□□□ -0.63
TRA2B-214ENST00000487615 PROS1P07225 676 aa11.1□□□□□ -0.63
TRA2B-214ENST00000487615 ANXA2P07355 339 aaKnown RBP11.1□□□□□ -0.63
TRA2B-214ENST00000487615 ELAVL4P26378 380 aaKnown RBP11.1□□□□□ -0.63
TRA2B-214ENST00000487615 FAUP35544 74 aaKnown RBP11.1□□□□□ -0.63
TRA2B-214ENST00000487615 TSFMP43897 325 aaKnown RBP11.1□□□□□ -0.63
TRA2B-214ENST00000487615 XCR1P46094 333 aa11.1□□□□□ -0.63
TRA2B-214ENST00000487615 PPP3R1P63098 170 aa11.1□□□□□ -0.63
TRA2B-214ENST00000487615 ZNF791Q3KP31 576 aaPredicted RBP11.1□□□□□ -0.63
TRA2B-214ENST00000487615 PIP5KL1Q5T9C9 394 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms