RNA–Protein interactions for RNA: ENST00000487150.2

LIMS3-205, Transcript of LIM zinc finger domain containing 3, humanhuman

TSL 3 BASIC

Gene LIMS3, Length 782 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-205ENST00000487150 HYAL4Q2M3T9 481 aa13.45□□□□□ -0.26
LIMS3-205ENST00000487150 PRAMEF20Q5VT98 475 aa13.45□□□□□ -0.26
LIMS3-205ENST00000487150 CDC73Q6P1J9 531 aa13.45□□□□□ -0.26
LIMS3-205ENST00000487150 NPSR1Q6W5P4 371 aa13.45□□□□□ -0.26
LIMS3-205ENST00000487150 PRR22Q8IZ63 422 aa13.45□□□□□ -0.26
LIMS3-205ENST00000487150 FAM109AQ8N4B1 249 aa13.45□□□□□ -0.26
LIMS3-205ENST00000487150 CPSF7Q8N684 471 aaKnown RBP13.45□□□□□ -0.26
LIMS3-205ENST00000487150 SIMC1Q8NDZ2 872 aa13.45□□□□□ -0.26
LIMS3-205ENST00000487150 ADAMTS15Q8TE58 950 aa13.45□□□□□ -0.26
LIMS3-205ENST00000487150 CHMP6Q96FZ7 201 aa13.45□□□□□ -0.26
LIMS3-205ENST00000487150 GPR137Q96N19 417 aa13.45□□□□□ -0.26
LIMS3-205ENST00000487150 PANX1Q96RD7 426 aa13.45□□□□□ -0.26
LIMS3-205ENST00000487150 ANGPTL4Q9BY76 406 aa13.45□□□□□ -0.26
LIMS3-205ENST00000487150 CXorf36Q9H7Y0 433 aa13.45□□□□□ -0.26
LIMS3-205ENST00000487150 ZFP64Q9NPA5 681 aa13.45□□□□□ -0.26
LIMS3-205ENST00000487150 KLRF1Q9NZS2 232 aa13.45□□□□□ -0.26
LIMS3-205ENST00000487150 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.45□□□□□ -0.26
LIMS3-205ENST00000487150 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.44□□□□□ -0.26
LIMS3-205ENST00000487150 A0A0G2JND7 137 aa13.44□□□□□ -0.26
LIMS3-205ENST00000487150 RFXANKO14593 260 aa13.44□□□□□ -0.26
LIMS3-205ENST00000487150 TSPAN2O60636 221 aa13.44□□□□□ -0.26
LIMS3-205ENST00000487150 IL33O95760 270 aa13.44□□□□□ -0.26
LIMS3-205ENST00000487150 HMGN2P05204 90 aaKnown RBP13.44□□□□□ -0.26
LIMS3-205ENST00000487150 EFNA1P20827 205 aaPredicted RBP13.44□□□□□ -0.26
LIMS3-205ENST00000487150 ATP6V1C1P21283 382 aa13.44□□□□□ -0.26
LIMS3-205ENST00000487150 GABRA3P34903 492 aa13.44□□□□□ -0.26
LIMS3-205ENST00000487150 CHI3L1P36222 383 aaPredicted RBP13.44□□□□□ -0.26
LIMS3-205ENST00000487150 CASP3P42574 277 aa13.44□□□□□ -0.26
LIMS3-205ENST00000487150 TDGF1P3P51864 188 aa13.44□□□□□ -0.26
LIMS3-205ENST00000487150 POLR2JP52435 117 aaKnown RBP13.44□□□□□ -0.26
LIMS3-205ENST00000487150 NME5P56597 212 aa13.44□□□□□ -0.26
LIMS3-205ENST00000487150 WNT3P56703 355 aa13.44□□□□□ -0.26
LIMS3-205ENST00000487150 PMP22Q01453 160 aa13.44□□□□□ -0.26
LIMS3-205ENST00000487150 KCNC4Q03721 635 aa13.44□□□□□ -0.26
LIMS3-205ENST00000487150 RCAN2Q14206 197 aa13.44□□□□□ -0.26
LIMS3-205ENST00000487150 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.44□□□□□ -0.26
LIMS3-205ENST00000487150 GFRALQ6UXV0 394 aa13.44□□□□□ -0.26
LIMS3-205ENST00000487150 CLECL1Q8IZS7 167 aa13.44□□□□□ -0.26
LIMS3-205ENST00000487150 EID3Q8N140 333 aa13.44□□□□□ -0.26
LIMS3-205ENST00000487150 GOT1L1Q8NHS2 421 aaPredicted RBP13.44□□□□□ -0.26
LIMS3-205ENST00000487150 HGDQ93099 445 aa13.44□□□□□ -0.26
LIMS3-205ENST00000487150 GIMAP5Q96F15 307 aa13.44□□□□□ -0.26
LIMS3-205ENST00000487150 TMEM41AQ96HV5 264 aa13.44□□□□□ -0.26
LIMS3-205ENST00000487150 ITCHQ96J02 903 aa13.44□□□□□ -0.26
LIMS3-205ENST00000487150 ADOQ96SZ5 270 aa13.44□□□□□ -0.26
LIMS3-205ENST00000487150 BTBD2Q9BX70 525 aa13.44□□□□□ -0.26
LIMS3-205ENST00000487150 TTTY12Q9BZ98 90 aa13.44□□□□□ -0.26
LIMS3-205ENST00000487150 PIGUQ9H490 435 aa13.44□□□□□ -0.26
LIMS3-205ENST00000487150 SDHAF3Q9NRP4 125 aa13.44□□□□□ -0.26
LIMS3-205ENST00000487150 DEPPQ9NTK1 212 aa13.44□□□□□ -0.26
LIMS3-205ENST00000487150 FGFR1OP2Q9NVK5 253 aa13.44□□□□□ -0.26
LIMS3-205ENST00000487150 DCTN4Q9UJW0 460 aa13.44□□□□□ -0.26
LIMS3-205ENST00000487150 NPIPA5E9PKD4 350 aa13.43□□□□□ -0.26
LIMS3-205ENST00000487150 ASNA1O43681 348 aa13.43□□□□□ -0.26
LIMS3-205ENST00000487150 UGT2B11O75310 529 aa13.43□□□□□ -0.26
LIMS3-205ENST00000487150 GLSO94925 669 aaPredicted RBP13.43□□□□□ -0.26
LIMS3-205ENST00000487150 CBX6O95503 412 aa13.43□□□□□ -0.26
LIMS3-205ENST00000487150 NGFRP08138 427 aa13.43□□□□□ -0.26
LIMS3-205ENST00000487150 GCKP35557 465 aa13.43□□□□□ -0.26
LIMS3-205ENST00000487150 MAP3K8P41279 467 aa13.43□□□□□ -0.26
LIMS3-205ENST00000487150 DNASE1L1P49184 302 aa13.43□□□□□ -0.26
LIMS3-205ENST00000487150 KHKP50053 298 aa13.43□□□□□ -0.26
LIMS3-205ENST00000487150 POU6F2P78424 691 aaPredicted RBP13.43□□□□□ -0.26
LIMS3-205ENST00000487150 GUCY1A3Q02108 690 aa13.43□□□□□ -0.26
LIMS3-205ENST00000487150 GAB1Q13480 694 aa13.43□□□□□ -0.26
LIMS3-205ENST00000487150 IGFBP7Q16270 282 aa13.43□□□□□ -0.26
LIMS3-205ENST00000487150 ATAD3BQ5T9A4 648 aa13.43□□□□□ -0.26
LIMS3-205ENST00000487150 ARHGAP11AQ6P4F7 1023 aa13.43□□□□□ -0.26
LIMS3-205ENST00000487150 ANKRD46Q86W74 232 aa13.43□□□□□ -0.26
LIMS3-205ENST00000487150 SIAH3Q8IW03 269 aa13.43□□□□□ -0.26
LIMS3-205ENST00000487150 ZNF527Q8NB42 609 aa13.43□□□□□ -0.26
LIMS3-205ENST00000487150 MIPOL1Q8TD10 442 aa13.43□□□□□ -0.26
LIMS3-205ENST00000487150 RMND5BQ96G75 393 aaPredicted RBP13.43□□□□□ -0.26
LIMS3-205ENST00000487150 SLC35G5Q96KT7 338 aa13.43□□□□□ -0.26
LIMS3-205ENST00000487150 MARK4Q96L34 752 aa13.43□□□□□ -0.26
LIMS3-205ENST00000487150 TEX37Q96LM6 180 aa13.43□□□□□ -0.26
LIMS3-205ENST00000487150 EBF4Q9BQW3 602 aa13.43□□□□□ -0.26
LIMS3-205ENST00000487150 NSRP1Q9H0G5 558 aaKnown RBP13.43□□□□□ -0.26
LIMS3-205ENST00000487150 ZNF703Q9H7S9 590 aaPredicted RBP13.43□□□□□ -0.26
LIMS3-205ENST00000487150 ZDHHC11Q9H8X9 412 aa13.43□□□□□ -0.26
LIMS3-205ENST00000487150 EXD2Q9NVH0 621 aa13.43□□□□□ -0.26
LIMS3-205ENST00000487150 NPIPA1Q9UND3 350 aa13.43□□□□□ -0.26
LIMS3-205ENST00000487150 CCDC154A6NI56 674 aa13.42□□□□□ -0.26
LIMS3-205ENST00000487150 SCN2BO60939 215 aa13.42□□□□□ -0.26
LIMS3-205ENST00000487150 TRIM3O75382 744 aaPredicted RBP13.42□□□□□ -0.26
LIMS3-205ENST00000487150 UNC5CO95185 931 aa13.42□□□□□ -0.26
LIMS3-205ENST00000487150 ANP32DO95626 131 aa13.42□□□□□ -0.26
LIMS3-205ENST00000487150 CPSF4O95639 269 aaKnown RBP13.42□□□□□ -0.26
LIMS3-205ENST00000487150 KRT75O95678 551 aa13.42□□□□□ -0.26
LIMS3-205ENST00000487150 HPGDP15428 266 aa13.42□□□□□ -0.26
LIMS3-205ENST00000487150 NCF2P19878 526 aaPredicted RBP13.42□□□□□ -0.26
LIMS3-205ENST00000487150 EVI2BP34910 448 aa13.42□□□□□ -0.26
LIMS3-205ENST00000487150 TRPC1P48995 793 aa13.42□□□□□ -0.26
LIMS3-205ENST00000487150 FOXO1Q12778 655 aa13.42□□□□□ -0.26
LIMS3-205ENST00000487150 DUSP5Q16690 384 aa13.42□□□□□ -0.26
LIMS3-205ENST00000487150 TIGD2Q4W5G0 525 aa13.42□□□□□ -0.26
LIMS3-205ENST00000487150 EXOSC6Q5RKV6 272 aaKnown RBP13.42□□□□□ -0.26
LIMS3-205ENST00000487150 MISPQ8IVT2 679 aa13.42□□□□□ -0.26
LIMS3-205ENST00000487150 SLC16A11Q8NCK7 471 aa13.42□□□□□ -0.26
LIMS3-205ENST00000487150 OR5AK3PQ8NH89 298 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms