RNA–Protein interactions for RNA: ENST00000486711.1

SMC4-218, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 621 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-218ENST00000486711 HOXD4P09016 255 aaPredicted RBP3.63□□□□□ -1.83
SMC4-218ENST00000486711 HOXB7P09629 217 aa3.63□□□□□ -1.83
SMC4-218ENST00000486711 ADRA1AP35348 466 aa3.63□□□□□ -1.83
SMC4-218ENST00000486711 ACAA2P42765 397 aaKnown RBP3.63□□□□□ -1.83
SMC4-218ENST00000486711 PTGFRP43088 359 aa3.63□□□□□ -1.83
SMC4-218ENST00000486711 CSRP3P50461 194 aa3.63□□□□□ -1.83
SMC4-218ENST00000486711 ZNF85Q03923 595 aa3.63□□□□□ -1.83
SMC4-218ENST00000486711 KLHL30Q0D2K2 578 aa3.63□□□□□ -1.83
SMC4-218ENST00000486711 ABRAXAS2Q15018 415 aa3.63□□□□□ -1.83
SMC4-218ENST00000486711 TRIP10Q15642 601 aa3.63□□□□□ -1.83
SMC4-218ENST00000486711 ZNF239Q16600 458 aaKnown RBP3.63□□□□□ -1.83
SMC4-218ENST00000486711 TPD52L1Q16890 204 aaPredicted RBP3.63□□□□□ -1.83
SMC4-218ENST00000486711 SNAI3Q3KNW1 292 aa3.63□□□□□ -1.83
SMC4-218ENST00000486711 TMEM41BQ5BJD5 291 aa3.63□□□□□ -1.83
SMC4-218ENST00000486711 LEMD1Q68G75 181 aa3.63□□□□□ -1.83
SMC4-218ENST00000486711 ADAMTSL5Q6ZMM2 481 aa3.63□□□□□ -1.83
SMC4-218ENST00000486711 KRTAP5-2Q701N4 177 aa3.63□□□□□ -1.83
SMC4-218ENST00000486711 CENPUQ71F23 418 aa3.63□□□□□ -1.83
SMC4-218ENST00000486711 Q7L0L9 218 aa3.63□□□□□ -1.83
SMC4-218ENST00000486711 ERASQ7Z444 233 aa3.63□□□□□ -1.83
SMC4-218ENST00000486711 CEACAM19Q7Z692 300 aa3.63□□□□□ -1.83
SMC4-218ENST00000486711 ZNF573Q86YE8 665 aa3.63□□□□□ -1.83
SMC4-218ENST00000486711 EFCAB13Q8IY85 973 aa3.63□□□□□ -1.83
SMC4-218ENST00000486711 OR2L2Q8NH16 312 aa3.63□□□□□ -1.83
SMC4-218ENST00000486711 FLVCR1-AS1Q8TAF5 88 aa3.63□□□□□ -1.83
SMC4-218ENST00000486711 TBCKQ8TEA7 893 aa3.63□□□□□ -1.83
SMC4-218ENST00000486711 CRYGNQ8WXF5 182 aa3.63□□□□□ -1.83
SMC4-218ENST00000486711 RIBC2Q9H4K1 309 aa3.63□□□□□ -1.83
SMC4-218ENST00000486711 WDR76Q9H967 626 aa3.63□□□□□ -1.83
SMC4-218ENST00000486711 RDH8Q9NYR8 311 aa3.63□□□□□ -1.83
SMC4-218ENST00000486711 SENP1Q9P0U3 644 aa3.63□□□□□ -1.83
SMC4-218ENST00000486711 MLXQ9UH92 298 aa3.63□□□□□ -1.83
SMC4-218ENST00000486711 GRIN2DO15399 1336 aa3.63□□□□□ -1.83
SMC4-218ENST00000486711 TRBV7-9A0A0J9YWB2 115 aa3.62□□□□□ -1.83
SMC4-218ENST00000486711 IMPA2O14732 288 aa3.62□□□□□ -1.83
SMC4-218ENST00000486711 PI15O43692 258 aa3.62□□□□□ -1.83
SMC4-218ENST00000486711 TOXO94900 526 aa3.62□□□□□ -1.83
SMC4-218ENST00000486711 MFN2O95140 757 aa3.62□□□□□ -1.83
SMC4-218ENST00000486711 HPP00738 406 aa3.62□□□□□ -1.83
SMC4-218ENST00000486711 CALRP27797 417 aaKnown RBP3.62□□□□□ -1.83
SMC4-218ENST00000486711 KIF5BP33176 963 aa3.62□□□□□ -1.83
SMC4-218ENST00000486711 ELK3P41970 407 aa3.62□□□□□ -1.83
SMC4-218ENST00000486711 STK19P49842 368 aaPredicted RBP3.62□□□□□ -1.83
SMC4-218ENST00000486711 EMDP50402 254 aa3.62□□□□□ -1.83
SMC4-218ENST00000486711 PRELPP51888 382 aa3.62□□□□□ -1.83
SMC4-218ENST00000486711 METAP1P53582 386 aa3.62□□□□□ -1.83
SMC4-218ENST00000486711 CYLC2Q14093 348 aaPredicted RBP3.62□□□□□ -1.83
SMC4-218ENST00000486711 RAB35Q15286 201 aa3.62□□□□□ -1.83
SMC4-218ENST00000486711 DCAF4L1Q3SXM0 396 aa3.62□□□□□ -1.83
SMC4-218ENST00000486711 CYBRD1Q53TN4 286 aa3.62□□□□□ -1.83
SMC4-218ENST00000486711 NHLRC3Q5JS37 347 aa3.62□□□□□ -1.83
SMC4-218ENST00000486711 SEL1L2Q5TEA6 688 aa3.62□□□□□ -1.83
SMC4-218ENST00000486711 SLX4IPQ5VYV7 408 aa3.62□□□□□ -1.83
SMC4-218ENST00000486711 PNCKQ6P2M8 343 aa3.62□□□□□ -1.83
SMC4-218ENST00000486711 NIPAL3Q6P499 406 aa3.62□□□□□ -1.83
SMC4-218ENST00000486711 CBWD2Q8IUF1 395 aa3.62□□□□□ -1.83
SMC4-218ENST00000486711 POM121L12Q8N7R1 296 aa3.62□□□□□ -1.83
SMC4-218ENST00000486711 RFESDQ8TAC1 157 aa3.62□□□□□ -1.83
SMC4-218ENST00000486711 ART4Q93070 314 aa3.62□□□□□ -1.83
SMC4-218ENST00000486711 NTNG2Q96CW9 530 aa3.62□□□□□ -1.83
SMC4-218ENST00000486711 TPPP3Q9BW30 176 aa3.62□□□□□ -1.83
SMC4-218ENST00000486711 GSDMCQ9BYG8 508 aa3.62□□□□□ -1.83
SMC4-218ENST00000486711 GNB4Q9HAV0 340 aa3.62□□□□□ -1.83
SMC4-218ENST00000486711 FARSBQ9NSD9 589 aaKnown RBP3.62□□□□□ -1.83
SMC4-218ENST00000486711 RCOR3Q9P2K3 495 aaPredicted RBP3.62□□□□□ -1.83
SMC4-218ENST00000486711 MFHAS1Q9Y4C4 1052 aa3.62□□□□□ -1.83
SMC4-218ENST00000486711 AGRNO00468 2067 aa3.62□□□□□ -1.83
SMC4-218ENST00000486711 IGHV3OR16-12A0A075B7B8 117 aa3.61□□□□□ -1.83
SMC4-218ENST00000486711 A0A1B0GUL7 405 aa3.61□□□□□ -1.83
SMC4-218ENST00000486711 A0A1W2PPR1 153 aa3.61□□□□□ -1.83
SMC4-218ENST00000486711 E9PAM4 449 aa3.61□□□□□ -1.83
SMC4-218ENST00000486711 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP3.61□□□□□ -1.83
SMC4-218ENST00000486711 CASKO14936 926 aa3.61□□□□□ -1.83
SMC4-218ENST00000486711 LANCL1O43813 399 aa3.61□□□□□ -1.83
SMC4-218ENST00000486711 OR4F21O95013 312 aa3.61□□□□□ -1.83
SMC4-218ENST00000486711 RENP00797 406 aa3.61□□□□□ -1.83
SMC4-218ENST00000486711 TSPY4P0CV99 314 aa3.61□□□□□ -1.83
SMC4-218ENST00000486711 TSPY10P0CW01 314 aa3.61□□□□□ -1.83
SMC4-218ENST00000486711 PVRP15151 417 aa3.61□□□□□ -1.83
SMC4-218ENST00000486711 H2AFXP16104 143 aaPredicted RBP3.61□□□□□ -1.83
SMC4-218ENST00000486711 SLC8A3P57103 927 aa3.61□□□□□ -1.83
SMC4-218ENST00000486711 NUCB2P80303 420 aa3.61□□□□□ -1.83
SMC4-218ENST00000486711 OVGP1Q12889 678 aa3.61□□□□□ -1.83
SMC4-218ENST00000486711 TAF7Q15545 349 aaPredicted RBP3.61□□□□□ -1.83
SMC4-218ENST00000486711 ZIC1Q15915 447 aa3.61□□□□□ -1.83
SMC4-218ENST00000486711 C17orf58Q2M2W7 97 aa3.61□□□□□ -1.83
SMC4-218ENST00000486711 HIGD2BQ4VC39 106 aa3.61□□□□□ -1.83
SMC4-218ENST00000486711 MS4A13Q5J8X5 152 aa3.61□□□□□ -1.83
SMC4-218ENST00000486711 SCYL2Q6P3W7 929 aa3.61□□□□□ -1.83
SMC4-218ENST00000486711 SLC22A18ASQ8N1D0 253 aa3.61□□□□□ -1.83
SMC4-218ENST00000486711 SUMF1Q8NBK3 374 aa3.61□□□□□ -1.83
SMC4-218ENST00000486711 STKLD1Q8NE28 680 aa3.61□□□□□ -1.83
SMC4-218ENST00000486711 NFAM1Q8NET5 270 aaPredicted RBP3.61□□□□□ -1.83
SMC4-218ENST00000486711 OR10T2Q8NGX3 314 aa3.61□□□□□ -1.83
SMC4-218ENST00000486711 ITLN1Q8WWA0 313 aa3.61□□□□□ -1.83
SMC4-218ENST00000486711 THRSPQ92748 146 aa3.61□□□□□ -1.83
SMC4-218ENST00000486711 TBC1D10AQ9BXI6 508 aa3.61□□□□□ -1.83
SMC4-218ENST00000486711 NFKBIZQ9BYH8 718 aa3.61□□□□□ -1.83
SMC4-218ENST00000486711 PUS3Q9BZE2 481 aaKnown RBP3.61□□□□□ -1.83
SMC4-218ENST00000486711 TIGARQ9NQ88 270 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms