RNA–Protein interactions for RNA: ENST00000486227.5

HDAC6-228, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 4,718 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-228ENST00000486227 ANXA3P12429 323 aa10.42□□□□□ -0.74
HDAC6-228ENST00000486227 CKMT1AP12532 417 aa10.42□□□□□ -0.74
HDAC6-228ENST00000486227 GP1BBP13224 206 aa10.42□□□□□ -0.74
HDAC6-228ENST00000486227 PVRP15151 417 aa10.42□□□□□ -0.74
HDAC6-228ENST00000486227 ARRB2P32121 409 aa10.42□□□□□ -0.74
HDAC6-228ENST00000486227 ZNF81P51508 661 aa10.42□□□□□ -0.74
HDAC6-228ENST00000486227 EMP3P54852 163 aa10.42□□□□□ -0.74
HDAC6-228ENST00000486227 PON3Q15166 354 aa10.42□□□□□ -0.74
HDAC6-228ENST00000486227 SPHARQ15513 63 aa10.42□□□□□ -0.74
HDAC6-228ENST00000486227 GDPGP1Q6ZNW5 385 aa10.42□□□□□ -0.74
HDAC6-228ENST00000486227 ADIPOR2Q86V24 386 aa10.42□□□□□ -0.74
HDAC6-228ENST00000486227 TOMM5Q8N4H5 51 aa10.42□□□□□ -0.74
HDAC6-228ENST00000486227 DENND6BQ8NEG7 585 aa10.42□□□□□ -0.74
HDAC6-228ENST00000486227 PROKR2Q8NFJ6 384 aa10.42□□□□□ -0.74
HDAC6-228ENST00000486227 FAM174AQ8TBP5 190 aa10.42□□□□□ -0.74
HDAC6-228ENST00000486227 TIMM29Q9BSF4 260 aa10.42□□□□□ -0.74
HDAC6-228ENST00000486227 RNF121Q9H920 327 aa10.42□□□□□ -0.74
HDAC6-228ENST00000486227 MYNNQ9NPC7 610 aa10.42□□□□□ -0.74
HDAC6-228ENST00000486227 OR6C2Q9NZP2 312 aa10.42□□□□□ -0.74
HDAC6-228ENST00000486227 ABCD2Q9UBJ2 740 aa10.42□□□□□ -0.74
HDAC6-228ENST00000486227 FBXO9Q9UK97 447 aaPredicted RBP10.42□□□□□ -0.74
HDAC6-228ENST00000486227 SARDHQ9UL12 918 aa10.42□□□□□ -0.74
HDAC6-228ENST00000486227 PCDHGB7Q9Y5F8 929 aa10.42□□□□□ -0.74
HDAC6-228ENST00000486227 ANTXRLA6NF34 631 aa10.41□□□□□ -0.74
HDAC6-228ENST00000486227 HOXC11O43248 304 aaPredicted RBP10.41□□□□□ -0.74
HDAC6-228ENST00000486227 NR2C1P13056 603 aa10.41□□□□□ -0.74
HDAC6-228ENST00000486227 MNDAP41218 407 aa10.41□□□□□ -0.74
HDAC6-228ENST00000486227 MC3RP41968 323 aa10.41□□□□□ -0.74
HDAC6-228ENST00000486227 ZNF41P51814 821 aaPredicted RBP10.41□□□□□ -0.74
HDAC6-228ENST00000486227 GBX2P52951 348 aaPredicted RBP10.41□□□□□ -0.74
HDAC6-228ENST00000486227 CASP6P55212 293 aa10.41□□□□□ -0.74
HDAC6-228ENST00000486227 KIAA0895LQ68EN5 471 aa10.41□□□□□ -0.74
HDAC6-228ENST00000486227 SLCO4C1Q6ZQN7 724 aa10.41□□□□□ -0.74
HDAC6-228ENST00000486227 SERPINA11Q86U17 422 aa10.41□□□□□ -0.74
HDAC6-228ENST00000486227 PLCZ1Q86YW0 608 aa10.41□□□□□ -0.74
HDAC6-228ENST00000486227 Q8N402 240 aa10.41□□□□□ -0.74
HDAC6-228ENST00000486227 L3MBTL4Q8NA19 623 aa10.41□□□□□ -0.74
HDAC6-228ENST00000486227 TEX37Q96LM6 180 aa10.41□□□□□ -0.74
HDAC6-228ENST00000486227 LPAR4Q99677 370 aa10.41□□□□□ -0.74
HDAC6-228ENST00000486227 UBQLN2Q9UHD9 624 aa10.41□□□□□ -0.74
HDAC6-228ENST00000486227 DKKL1Q9UK85 242 aa10.41□□□□□ -0.74
HDAC6-228ENST00000486227 MEIOCA2RUB1 952 aa10.41□□□□□ -0.74
HDAC6-228ENST00000486227 H0YIV9 168 aa10.41□□□□□ -0.74
HDAC6-228ENST00000486227 J3QLW9 94 aa10.41□□□□□ -0.74
HDAC6-228ENST00000486227 ENTPD6O75354 484 aa10.41□□□□□ -0.74
HDAC6-228ENST00000486227 ZNF19P17023 458 aa10.41□□□□□ -0.74
HDAC6-228ENST00000486227 HBA1P69905 142 aa10.41□□□□□ -0.74
HDAC6-228ENST00000486227 RHAGQ02094 409 aa10.41□□□□□ -0.74
HDAC6-228ENST00000486227 SCRN3Q0VDG4 424 aa10.41□□□□□ -0.74
HDAC6-228ENST00000486227 STEAP3Q658P3 488 aa10.41□□□□□ -0.74
HDAC6-228ENST00000486227 PARM1Q6UWI2 310 aa10.41□□□□□ -0.74
HDAC6-228ENST00000486227 Q6ZNB5 142 aa10.41□□□□□ -0.74
HDAC6-228ENST00000486227 PTRH1Q86Y79 214 aaKnown RBP10.41□□□□□ -0.74
HDAC6-228ENST00000486227 OR4K5Q8NGD3 323 aa10.41□□□□□ -0.74
HDAC6-228ENST00000486227 OR5D16Q8NGK9 328 aa10.41□□□□□ -0.74
HDAC6-228ENST00000486227 OR5L2Q8NGL0 311 aa10.41□□□□□ -0.74
HDAC6-228ENST00000486227 OR56A3Q8NH54 315 aa10.41□□□□□ -0.74
HDAC6-228ENST00000486227 ASB15Q8WXK1 588 aa10.41□□□□□ -0.74
HDAC6-228ENST00000486227 GPER1Q99527 375 aa10.41□□□□□ -0.74
HDAC6-228ENST00000486227 TMED9Q9BVK6 235 aa10.41□□□□□ -0.74
HDAC6-228ENST00000486227 SLC6A17Q9H1V8 727 aa10.41□□□□□ -0.74
HDAC6-228ENST00000486227 FOLH1BQ9HBA9 442 aa10.41□□□□□ -0.74
HDAC6-228ENST00000486227 GPR83Q9NYM4 423 aa10.41□□□□□ -0.74
HDAC6-228ENST00000486227 TMEM5Q9Y2B1 443 aa10.41□□□□□ -0.74
HDAC6-228ENST00000486227 RBM7Q9Y580 266 aaKnown RBP10.41□□□□□ -0.74
HDAC6-228ENST00000486227 ARFGEF1Q9Y6D6 1849 aa10.41□□□□□ -0.74
HDAC6-228ENST00000486227 SMIM30A4D0T7 59 aa10.41□□□□□ -0.74
HDAC6-228ENST00000486227 K7ESM1 405 aa10.41□□□□□ -0.74
HDAC6-228ENST00000486227 M0R3H8 397 aa10.41□□□□□ -0.74
HDAC6-228ENST00000486227 AHSA1O95433 338 aa10.41□□□□□ -0.74
HDAC6-228ENST00000486227 HMGN2P05204 90 aaKnown RBP10.41□□□□□ -0.74
HDAC6-228ENST00000486227 PBX2P40425 430 aa10.41□□□□□ -0.74
HDAC6-228ENST00000486227 PIN1Q13526 163 aaPredicted RBP10.41□□□□□ -0.74
HDAC6-228ENST00000486227 NR0B2Q15466 257 aa10.41□□□□□ -0.74
HDAC6-228ENST00000486227 GGTA1PQ4G0N0 100 aa10.41□□□□□ -0.74
HDAC6-228ENST00000486227 C1orf189Q5VU69 101 aa10.41□□□□□ -0.74
HDAC6-228ENST00000486227 B3GNT8Q7Z7M8 397 aa10.41□□□□□ -0.74
HDAC6-228ENST00000486227 KIF18BQ86Y91 864 aa10.41□□□□□ -0.74
HDAC6-228ENST00000486227 OR9Q2Q8NGE9 314 aa10.41□□□□□ -0.74
HDAC6-228ENST00000486227 OR51G2Q8NGK0 314 aa10.41□□□□□ -0.74
HDAC6-228ENST00000486227 OR9A2Q8NGT5 310 aa10.41□□□□□ -0.74
HDAC6-228ENST00000486227 OR5K2Q8NHB8 316 aa10.41□□□□□ -0.74
HDAC6-228ENST00000486227 ADAMTS18Q8TE60 1221 aa10.41□□□□□ -0.74
HDAC6-228ENST00000486227 UBTD2Q8WUN7 234 aa10.41□□□□□ -0.74
HDAC6-228ENST00000486227 TRIM2Q9C040 744 aa10.41□□□□□ -0.74
HDAC6-228ENST00000486227 TM7SF3Q9NS93 570 aa10.41□□□□□ -0.74
HDAC6-228ENST00000486227 DOCK5Q9H7D0 1870 aa10.41□□□□□ -0.74
HDAC6-228ENST00000486227 M0R233 179 aa10.41□□□□□ -0.74
HDAC6-228ENST00000486227 SNAPC5O75971 98 aa10.41□□□□□ -0.74
HDAC6-228ENST00000486227 SLCO2B1O94956 709 aa10.41□□□□□ -0.74
HDAC6-228ENST00000486227 RPP14O95059 124 aaKnown RBP10.41□□□□□ -0.74
HDAC6-228ENST00000486227 LDOC1O95751 146 aaPredicted RBP10.41□□□□□ -0.74
HDAC6-228ENST00000486227 S100A6P06703 90 aa10.41□□□□□ -0.74
HDAC6-228ENST00000486227 PCGF2P35227 344 aa10.41□□□□□ -0.74
HDAC6-228ENST00000486227 SLC3A1Q07837 685 aa10.41□□□□□ -0.74
HDAC6-228ENST00000486227 KIR2DS3Q14952 304 aa10.41□□□□□ -0.74
HDAC6-228ENST00000486227 TBCEQ15813 527 aaPredicted RBP10.41□□□□□ -0.74
HDAC6-228ENST00000486227 SLC5A12Q1EHB4 618 aa10.41□□□□□ -0.74
HDAC6-228ENST00000486227 ATAD3CQ5T2N8 411 aa10.41□□□□□ -0.74
HDAC6-228ENST00000486227 HENMT1Q5T8I9 393 aaKnown RBP10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms